BDGP Sequence Production Resources |
Search the DGRC for LD34147
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 341 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5080-RA |
Protein status: | LD34147.pep: gold |
Preliminary Size: | 2167 |
Sequenced Size: | 2002 |
Gene | Date | Evidence |
---|---|---|
CG5080 | 2001-01-01 | Release 2 assignment |
CG5080 | 2001-09-19 | Blastp of sequenced clone |
CG5080 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5080 | 2008-04-29 | Release 5.5 accounting |
CG5080 | 2008-08-15 | Release 5.9 accounting |
CG5080 | 2008-12-18 | 5.12 accounting |
2002 bp (2002 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058642
> LD34147.complete CTGTTAGGACGTCCAGCTCCAAGTTTTCGAGCCAAGTGATCCAAGTGTGT GTGCAAAACAGAGGCTACTCTTCGAACTTGAGCCATTCAATTTCCCCCAA GGGTCACCCCACGCAGTGGACTCGCTTACCAATTTAAGATCGCATCGACG CACCAAACCCACGATGGCCGGAGGAAGTCGCCCTCTCCAATTAGTTCTCC TGGTCCTAGTTGCGCTCGCCCAATGGCAACCCATCGCCGCTGGATTGGTC TCCAACGAGGAGCTGCGCGGAACTATCCAGTCGCTGATCTACTCCTACAA TCAGCTGGACAATAAGCTGGAGCGGCACGAGCATCGCGAGCGTGCGTTGG GCGAGCTGCTCAAGAAGGCGCTGCAGTCGCTCCAGAAGGGCCAGAAGAGC CTGGAGCCCATCAATGGGATCTTCGGGCGCCTGGACGAGCGGGTCAGCCA GATAGAGACCATGCTGATCACGCAAGAGGAGAAGTACAACTCGCAGTCGG ACCGCTTCAACCAGGCAACGGAGCACATGTTCAAGTGGATGCGGGAGAAC GACGAGTGCTTCAAGAGGCCGCCGGTCAGCGCCAACATGATCGCTCCCCC AGCCGCGGCCGCCCCACCCGCCATTCCCAAGGAGTTCCTGGAGGATCAGA AGCGCCTCAACGCCAAGCTGCTCGAGGAGATCCAGAAGTTGTCGGCCAGC GTGGCCGCCCTCAAGGAGAGCAGCCAGAAGGCGTCCGATCAGACCCAGAA GCGCCTCGAGGGTCTGCCCAAGGCACCGGAGCTGCTGTCCCAGATCGAAG CCAAGCTGCAAGAGCACGCGGCCAGCGTGACCACCGCCGCTCCACCGAAG AACGCTGAGTTCGAGGCCCAACTCCTGGAGCGTCTCACCTCGCTGGGCGG CCAGGTGAGCTCTCTAAGCGAGACTGTGCAGCGACCAGCTGCTCCGGTTG GCCTGAGCGAGACGGATCGCGCCTACATCCAGGAACTGAACAACGATACC CTGAATGCGCTGGCGCAGCTGAAGAGCGAGTCCTCGGTGGAACAGAAGTC AGCTGCGACGGAGGCCACGGAGCGACTGCAGCAGGCGGAGGCCAACATCC AGGCGGACGTTCGCCAGCTGTCCGCGGACGTGGGCATTCTCAACAAGCAC TTCGCCTCGACTAACGAGAGCAATGCCAAGCTGAACGAGGGACTCGAAGC GCTCGGTAAGTTCAACAACATCATGATGACCAACTCGGAGGTCGTGCTGG ACACGCAGCGCAAGGTGGACTTCGGCACACTGAACGTGGTGCAGCGGGTT GGCAAGCTGCTGGCGGAGGAAATGGCCACGCTGAGCGGACTGCTGAAGGA GCGCTTCTCGTCGCTGGACGGAGCGGTGGTGAGCATCCAGCAGGAGGCGA ACAAGAACATCAGCGGACTGCTGGAAACGGAGCTGAACCAGGTGTGGCAC CGCATCGAGATCATGGCCGGCGAGATCAGCCAGAGCCGGCTGATGCTCGG AGATATCCAGTCCGCTTCCGATGGCTACAACAACAGCACTCTCATCACCA TGATGGGTCTCGGCAGCCGCGTGGAGGAGACCAAGAAACACATGATCGAC ATGGACGAGAACCTCAACTATCTGCTGGGCAAGCTGTCGCTCATGTCCAC CGAGTTCGCCAGCATCAAGAAGGGCCTGGCCGACTCCCTCGAGGATCTGC GCAACTCCTTCCACGGCCTCCACGAGCGGATGCCCACGGGTCCCGGTCCG CACAACATCGACAAGAACACGTATCTGACCGACGTCAATCTCCTGTCCAA GCGCCACGCTGAGCCCGGTCGGGAGTAGAGCGGCTGAGCGCCGGAGATGA CACTTGAACGAAAAGCAATACAATACTTTTAACCATAGCGCTTAAGTCTG CCCACTTACATATACTCATCTAGTTGCGCCTTAAGCTTAAGCACAGCAAA ACGTCACTCAATAAAGATCGAATATTATGTACAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1160216..1161148 | 1982..1050 | 4665 | 100 | Minus |
chr2L | 23010047 | chr2L | 1161216..1161796 | 1052..472 | 2860 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 1161853..1162072 | 472..253 | 1100 | 100 | Minus |
chr2L | 23010047 | chr2L | 1162926..1163077 | 252..102 | 710 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 1163685..1163788 | 104..1 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1160288..1161222 | 1984..1050 | 4675 | 100 | Minus |
2L | 23513712 | 2L | 1161290..1161870 | 1052..472 | 2905 | 100 | Minus |
2L | 23513712 | 2L | 1161927..1162146 | 472..253 | 1100 | 100 | Minus |
2L | 23513712 | 2L | 1163000..1163150 | 252..102 | 755 | 100 | Minus |
2L | 23513712 | 2L | 1163758..1163861 | 104..1 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1160288..1161222 | 1984..1050 | 4675 | 100 | Minus |
2L | 23513712 | 2L | 1161290..1161870 | 1052..472 | 2905 | 100 | Minus |
2L | 23513712 | 2L | 1161927..1162146 | 472..253 | 1100 | 100 | Minus |
2L | 23513712 | 2L | 1163000..1163150 | 252..102 | 755 | 100 | Minus |
2L | 23513712 | 2L | 1163758..1163861 | 104..1 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 7590..7644 | 1333..1279 | 113 | 67.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1160216..1161145 | 1053..1982 | 100 | <- | Minus |
chr2L | 1161216..1161795 | 473..1052 | 99 | <- | Minus |
chr2L | 1161853..1162072 | 253..472 | 100 | <- | Minus |
chr2L | 1162926..1163076 | 103..252 | 99 | <- | Minus |
chr2L | 1163687..1163788 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RA | 1..1665 | 164..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RA | 1..1665 | 164..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 1..1665 | 164..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RA | 1..1665 | 164..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 1..1665 | 164..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 22..2003 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 22..2003 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 26..2007 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 22..2003 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5080-RB | 26..2007 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1160290..1161219 | 1053..1982 | 100 | <- | Minus |
2L | 1161290..1161869 | 473..1052 | 100 | <- | Minus |
2L | 1161927..1162146 | 253..472 | 100 | <- | Minus |
2L | 1163000..1163149 | 103..252 | 100 | <- | Minus |
2L | 1163760..1163861 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1160290..1161219 | 1053..1982 | 100 | <- | Minus |
2L | 1161290..1161869 | 473..1052 | 100 | <- | Minus |
2L | 1161927..1162146 | 253..472 | 100 | <- | Minus |
2L | 1163000..1163149 | 103..252 | 100 | <- | Minus |
2L | 1163760..1163861 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1160290..1161219 | 1053..1982 | 100 | <- | Minus |
2L | 1161290..1161869 | 473..1052 | 100 | <- | Minus |
2L | 1161927..1162146 | 253..472 | 100 | <- | Minus |
2L | 1163000..1163149 | 103..252 | 100 | <- | Minus |
2L | 1163760..1163861 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1160290..1161219 | 1053..1982 | 100 | <- | Minus |
arm_2L | 1161290..1161869 | 473..1052 | 100 | <- | Minus |
arm_2L | 1161927..1162146 | 253..472 | 100 | <- | Minus |
arm_2L | 1163000..1163149 | 103..252 | 100 | <- | Minus |
arm_2L | 1163760..1163861 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1163760..1163861 | 1..102 | 100 | Minus | |
2L | 1160290..1161219 | 1053..1982 | 100 | <- | Minus |
2L | 1161290..1161869 | 473..1052 | 100 | <- | Minus |
2L | 1161927..1162146 | 253..472 | 100 | <- | Minus |
2L | 1163000..1163149 | 103..252 | 100 | <- | Minus |
Translation from 163 to 1827
> LD34147.pep MAGGSRPLQLVLLVLVALAQWQPIAAGLVSNEELRGTIQSLIYSYNQLDN KLERHEHRERALGELLKKALQSLQKGQKSLEPINGIFGRLDERVSQIETM LITQEEKYNSQSDRFNQATEHMFKWMRENDECFKRPPVSANMIAPPAAAA PPAIPKEFLEDQKRLNAKLLEEIQKLSASVAALKESSQKASDQTQKRLEG LPKAPELLSQIEAKLQEHAASVTTAAPPKNAEFEAQLLERLTSLGGQVSS LSETVQRPAAPVGLSETDRAYIQELNNDTLNALAQLKSESSVEQKSAATE ATERLQQAEANIQADVRQLSADVGILNKHFASTNESNAKLNEGLEALGKF NNIMMTNSEVVLDTQRKVDFGTLNVVQRVGKLLAEEMATLSGLLKERFSS LDGAVVSIQQEANKNISGLLETELNQVWHRIEIMAGEISQSRLMLGDIQS ASDGYNNSTLITMMGLGSRVEETKKHMIDMDENLNYLLGKLSLMSTEFAS IKKGLADSLEDLRNSFHGLHERMPTGPGPHNIDKNTYLTDVNLLSKRHAE PGRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14732-PA | 552 | GF14732-PA | 1..550 | 1..550 | 2288 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24608-PA | 555 | GG24608-PA | 1..555 | 1..554 | 2604 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11185-PA | 555 | GH11185-PA | 4..555 | 3..554 | 1736 | 61.6 | Plus |
Dgri\GH13899-PA | 227 | GH13899-PA | 2..227 | 330..554 | 749 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5080-PC | 554 | CG5080-PC | 1..554 | 1..554 | 2754 | 100 | Plus |
CG5080-PA | 554 | CG5080-PA | 1..554 | 1..554 | 2754 | 100 | Plus |
CG5080-PB | 554 | CG5080-PB | 1..554 | 1..554 | 2754 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18062-PA | 560 | GI18062-PA | 1..556 | 1..551 | 1747 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15001-PA | 508 | GL15001-PA | 3..507 | 29..550 | 1978 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18646-PA | 535 | GA18646-PA | 1..534 | 1..550 | 2053 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16623-PA | 554 | GM16623-PA | 1..554 | 1..554 | 2818 | 96.8 | Plus |
Dsec\GM12824-PA | 274 | GM12824-PA | 16..274 | 296..554 | 1347 | 98.5 | Plus |
Dsec\GM13294-PA | 103 | GM13294-PA | 23..99 | 27..103 | 390 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22923-PA | 554 | GD22923-PA | 1..554 | 1..554 | 2835 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16490-PA | 564 | GJ16490-PA | 30..564 | 24..554 | 1818 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18377-PA | 552 | GK18377-PA | 1..546 | 11..551 | 1898 | 67 | Plus |
Dwil\GK18831-PA | 235 | GK18831-PA | 1..229 | 323..551 | 906 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15733-PA | 554 | GE15733-PA | 1..554 | 1..554 | 2383 | 88.1 | Plus |
Translation from 163 to 1827
> LD34147.hyp MAGGSRPLQLVLLVLVALAQWQPIAAGLVSNEELRGTIQSLIYSYNQLDN KLERHEHRERALGELLKKALQSLQKGQKSLEPINGIFGRLDERVSQIETM LITQEEKYNSQSDRFNQATEHMFKWMRENDECFKRPPVSANMIAPPAAAA PPAIPKEFLEDQKRLNAKLLEEIQKLSASVAALKESSQKASDQTQKRLEG LPKAPELLSQIEAKLQEHAASVTTAAPPKNAEFEAQLLERLTSLGGQVSS LSETVQRPAAPVGLSETDRAYIQELNNDTLNALAQLKSESSVEQKSAATE ATERLQQAEANIQADVRQLSADVGILNKHFASTNESNAKLNEGLEALGKF NNIMMTNSEVVLDTQRKVDFGTLNVVQRVGKLLAEEMATLSGLLKERFSS LDGAVVSIQQEANKNISGLLETELNQVWHRIEIMAGEISQSRLMLGDIQS ASDGYNNSTLITMMGLGSRVEETKKHMIDMDENLNYLLGKLSLMSTEFAS IKKGLADSLEDLRNSFHGLHERMPTGPGPHNIDKNTYLTDVNLLSKRHAE PGRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5080-PC | 554 | CG5080-PC | 1..554 | 1..554 | 2754 | 100 | Plus |
CG5080-PA | 554 | CG5080-PA | 1..554 | 1..554 | 2754 | 100 | Plus |
CG5080-PB | 554 | CG5080-PB | 1..554 | 1..554 | 2754 | 100 | Plus |