BDGP Sequence Production Resources |
Search the DGRC for LD34179
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 341 |
Well: | 79 |
Vector: | pOT2 |
Associated Gene/Transcript | Torsin-RA |
Protein status: | LD34179.pep: gold |
Preliminary Size: | 1374 |
Sequenced Size: | 1174 |
Gene | Date | Evidence |
---|---|---|
CG3024 | 2001-01-01 | Release 2 assignment |
CG3024 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3024 | 2003-01-14 | Blastp of sequenced clone |
torp4a | 2008-04-29 | Release 5.5 accounting |
torp4a | 2008-08-15 | Release 5.9 accounting |
torp4a | 2008-12-18 | 5.12 accounting |
1174 bp (1174 high quality bases) assembled on 2003-01-14
GenBank Submission: AY069592
> LD34179.complete CCCATCTATACATTCCACCGCGGAATTTTCCTTGCATTTTATGATGAGCT TTCCACGCATGTTATCACTGTGCCTTAGCGTGCTTGTAATACTGCCGCTT CCCCTCCAGTCGGTGGATCCCCTGACCATTGGTGCCGTTGGCGCCGTGGC CCTTGGGGCGTACTTCAAAGAACATACATATTGCCGGTTTGCCGAATGCT GCGATGACCGAAACATTCCGGCGAGAATAGATGAATTAGAAAGATCCCTG GAACGCACCCTCATTGGCCAGCACATCGTGAGGCAGCATATCGTCCCCGC ACTGAAGGCGCACATCGCTTCGGGCAATAAGTCACGGAAACCGCTGGTCA TCAGCTTTCACGGCCAGCCCGGTACGGGCAAGAATTTTGTGGCTGAGCAA ATTGCAGATGCTATGTATTTGAAGGGCTCCAGGTCGAACTATGTAACCAA GTATCTCGGACAAGCTGACTTTCCCAAGGAAAGTGAGGTGTCTAACTATA GGGTGAAAATCAATAATGCGGTGCGCGATACCTTGCGTAGCTGCCCGAGA TCTTTGTTCATCTTCGACGAGGTGGATAAAATGCCCAGCGGAGTATTCGA CCAGCTCACCTCGCTGGTGGACTACAACGCCTTTGTCGATGGCACGGATA ACACAAAGGCAATCTTCATCTTTCTCTCGAACACGGCGGGCAGTCATATA GCCAGTCATCTGGGTAGTGTGATGAAGAATGGTAGGCTGCGCGAGGACAC ACGACTGAGTGACTTTGAGCCCCTTTTGCGGAAGGCCGCCTATAACATGG ATGGCGGTATGAAAAAGACCACCATGATTGAGTCTCATGTTATCGATCAT TTCATTCCGTTCCTGCCGATGGAGAAGGCGCATGTGATCAAGTGCCTGGA GGCGGAGCTTTTAAGGTGGCGGCGCGATCCTAAGCAAGCGAACAACCAAA AAATCATTGAGGACATAATAAACTCCTCCATTAGTTACGATCGCACGCAC AGCTTGTTCGCCATTTCGGGCTGCAAGACGCTGGAGAAGAAGGTGGCCAT GGCCATTTACTGAGAAAGGACCGACCGACTCCACATTTTAATGCTTAGTT TGGGTTTCGGTTTGTATTTAAAAAACTATTTTTTCGGAATAAAGAAAACA AATTTTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4541384..4542306 | 234..1156 | 100 | <- | Minus |
chrX | 4542365..4542597 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 1..1023 | 41..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 1..1023 | 41..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Torsin-RA | 1..1023 | 41..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 1..1023 | 41..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Torsin-RA | 1..1023 | 41..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 28..1183 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 28..1183 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Torsin-RA | 29..1184 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
torp4a-RA | 28..1183 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Torsin-RA | 29..1184 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4648592..4649514 | 234..1156 | 100 | <- | Minus |
X | 4649573..4649805 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4648592..4649514 | 234..1156 | 100 | <- | Minus |
X | 4649573..4649805 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4648592..4649514 | 234..1156 | 100 | <- | Minus |
X | 4649573..4649805 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4542625..4543547 | 234..1156 | 100 | <- | Minus |
arm_X | 4543606..4543838 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4656690..4657612 | 234..1156 | 100 | <- | Minus |
X | 4657671..4657903 | 1..233 | 100 | Minus |
Translation from 0 to 1062
> LD34179.hyp PSIHSTAEFSLHFMMSFPRMLSLCLSVLVILPLPLQSVDPLTIGAVGAVA LGAYFKEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPA LKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTK YLGQADFPKESEVSNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFD QLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGSVMKNGRLREDT RLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLE AELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKKVAM AIY*
Translation from 40 to 1062
> LD34179.pep MMSFPRMLSLCLSVLVILPLPLQSVDPLTIGAVGAVALGAYFKEHTYCRF AECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRK PLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEV SNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVD GTDNTKAIFIFLSNTAGSHIASHLGSVMKNGRLREDTRLSDFEPLLRKAA YNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAELLRWRRDPKQA NNQKIIEDIINSSISYDRTHSLFAISGCKTLEKKVAMAIY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20855-PA | 340 | GF20855-PA | 1..339 | 2..339 | 1256 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18527-PA | 341 | GG18527-PA | 18..340 | 19..339 | 1338 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17629-PA | 278 | GH17629-PA | 1..271 | 63..337 | 881 | 58.5 | Plus |
Dgri\GH17628-PA | 271 | GH17628-PA | 1..264 | 63..337 | 843 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Torsin-PB | 340 | CG3024-PB | 1..340 | 1..340 | 1754 | 100 | Plus |
Torsin-PA | 340 | CG3024-PA | 1..340 | 1..340 | 1754 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16067-PA | 333 | GI16067-PA | 14..329 | 22..340 | 988 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14553-PA | 313 | GL14553-PA | 1..312 | 25..339 | 1081 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15729-PA | 313 | GA15729-PA | 1..312 | 25..339 | 1075 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12675-PA | 340 | GM12675-PA | 1..340 | 2..340 | 1580 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16282-PA | 340 | GD16282-PA | 1..340 | 2..340 | 1537 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15712-PA | 338 | GJ15712-PA | 17..332 | 22..339 | 1032 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16456-PA | 341 | GK16456-PA | 27..340 | 24..339 | 1079 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16843-PA | 341 | GE16843-PA | 1..340 | 2..339 | 1512 | 80 | Plus |