BDGP Sequence Production Resources |
Search the DGRC for LD34211
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 342 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | Ykt6-RA |
Protein status: | LD34211.pep: gold |
Preliminary Size: | 1660 |
Sequenced Size: | 1439 |
Gene | Date | Evidence |
---|---|---|
CG1515 | 2001-01-01 | Release 2 assignment |
CG1515 | 2001-07-04 | Blastp of sequenced clone |
CG1515 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0155 | 2008-04-29 | Release 5.5 accounting |
l(1)G0155 | 2008-08-15 | Release 5.9 accounting |
l(1)G0155 | 2008-12-18 | 5.12 accounting |
1439 bp (1439 high quality bases) assembled on 2001-07-04
GenBank Submission: AY059454
> LD34211.complete GGGAACGGCACAGATTTACTGCGTTAAACAAACTCACTTGTCGCACTTTT CCACGAATGCCAGTGCGCTGAAAGTGAAACCCATCCGCCGGAGCATAGTA GGATTAGCCAGGACAACCGTTCAGCTCAGTGCCCCAGAAGCATTTAATTG GAGGAGCAACAGTCGAGCAACCCGCGACCCGCAGACCCAGTCTTGGCAGC CCACAGCCACTCAAAATGGTCAAACTATTCGCGTTGAGCATCTTTCACAA GGGCGCCAGCGAGGCGCGTCTCCTGAAGACCGCCTCGGACCTGCAGTCCT TCTCCTTTTTCCAACGTGGCACCGTCAACGAGTTCATGACTTTCGCTTCG AAGACGATTGTGGAGCGCACACAGCCGGCCCTGCGGCAATCGGTGAAACA GGATGCCTACATGTGTCATGTCTATGTGCGGGCGGACAATCTGGCCGGTG TACTGATCGCCGATCATGAGTATCCGCATCGCGTGGCGCACACGCTTATC ACAAAGATTCTGGATGACTTTACGGCCAAGGTGTCGGCCGATCAGTGGCC CAATGGCACGGAGGCCACTATCTCATTTGACTTGCTGCCAGCGTTTCTAG CACGCTATCAAAATCCCGTCGAAGCAGATCCGCTGACGAAAATGCAAAAC GACCTGGACGAAACGAAGATCATACTGAAGAATACCATCGAGGCGGTGCT GGAGCGGGGCGAGAAGCTGGACGACATGGTCAGCAAGTCGGAGAAATTGT CGCTGCAGAGCAAGGCGTTCTACAAGACGGCGAAAAAGACTAACTCCTGC TGCAGCTTCACCTAGACGACAGCTGCACCTCTCATCACCCCCCACCACAC GCTAATCCTCTCAAGCAACAACCACAACAGGAAACACCAGAAAATGCAAA TCAAAGACAACACAAAGGATAATGGATAACACGATAACACCAACAAACTA CAACCAAACAAACTCCAAGGGAGCGGTGCGACTTGGGCTTTGATGATTGC TTTTTATAAATGAATTAGTTAATTTTATATACTATATATATATATTATAT TATATACTGTATGAATAGGATGGCCAGTTGCCAGTTACGATAGTCCGCTA ACCCAATGTCTACCTGTCTGTATATGTCTACGCTTTGGATATCTAAATGT TAATTACTACCAATACAGATTACGATCTAAACCCATGTGCTTAACATAAT CTTCTCTTCACTTATGTGTTGGCACGGCGGTCCAAAATTGGCCCTTTGCT AGCTATTGATGTTGTGGGCCTTCTTATCGCCTCCACGGCGGATCTATGTA TACCAATCGGATCGGAAGGCTGCACCTATGTATACACATGCAGTCGCACT TCCGATCCGGGCAACTGGCGGTCGGAATGTGTGGGCGTTTCAATAAAGAA GTATTATGGGAAATGTGAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ykt6-RA | 1594 | Ykt6-RA | 151..1569 | 1..1419 | 7095 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7812803..7813543 | 341..1081 | 3705 | 100 | Plus |
chrX | 22417052 | chrX | 7812374..7812713 | 1..340 | 1700 | 100 | Plus |
chrX | 22417052 | chrX | 7813543..7813846 | 1114..1417 | 1505 | 99.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7812374..7812713 | 1..340 | 100 | -> | Plus |
chrX | 7812803..7813462 | 341..1000 | 100 | == | Plus |
chrX | 7813519..7813546 | 1057..1085 | 93 | == | Plus |
chrX | 7813547..7813846 | 1118..1417 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0155-RA | 1..600 | 216..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 1..600 | 216..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 1..600 | 216..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0155-RA | 1..600 | 216..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 1..600 | 216..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0155-RA | 1..1417 | 1..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 1..1417 | 1..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 53..1469 | 1..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0155-RA | 1..1417 | 1..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ykt6-RA | 53..1469 | 1..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7920461..7920800 | 1..340 | 100 | -> | Plus |
X | 7920890..7921966 | 341..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7920461..7920800 | 1..340 | 100 | -> | Plus |
X | 7920890..7921966 | 341..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7920461..7920800 | 1..340 | 100 | -> | Plus |
X | 7920890..7921966 | 341..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7814494..7814833 | 1..340 | 100 | -> | Plus |
arm_X | 7814923..7815999 | 341..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7928559..7928898 | 1..340 | 100 | -> | Plus |
X | 7928988..7930064 | 341..1417 | 100 | Plus |
Translation from 215 to 814
> LD34211.pep MVKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVE RTQPALRQSVKQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILD DFTAKVSADQWPNGTEATISFDLLPAFLARYQNPVEADPLTKMQNDLDET KIILKNTIEAVLERGEKLDDMVSKSEKLSLQSKAFYKTAKKTNSCCSFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21192-PA | 199 | GF21192-PA | 1..199 | 1..199 | 995 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19670-PA | 199 | GG19670-PA | 1..199 | 1..199 | 1065 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12325-PA | 199 | GH12325-PA | 1..198 | 1..198 | 965 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ykt6-PA | 199 | CG1515-PA | 1..199 | 1..199 | 1011 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14604-PA | 199 | GI14604-PA | 1..199 | 1..199 | 971 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18342-PA | 199 | GL18342-PA | 1..199 | 1..199 | 1023 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13531-PA | 199 | GA13531-PA | 1..199 | 1..199 | 1023 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11984-PA | 199 | GM11984-PA | 1..199 | 1..199 | 1065 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16871-PA | 199 | GD16871-PA | 1..199 | 1..199 | 1065 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19012-PA | 199 | GJ19012-PA | 1..198 | 1..198 | 984 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25383-PA | 199 | GK25383-PA | 1..199 | 1..199 | 946 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15747-PA | 199 | GE15747-PA | 1..199 | 1..199 | 1065 | 100 | Plus |
Translation from 215 to 814
> LD34211.hyp MVKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVE RTQPALRQSVKQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILD DFTAKVSADQWPNGTEATISFDLLPAFLARYQNPVEADPLTKMQNDLDET KIILKNTIEAVLERGEKLDDMVSKSEKLSLQSKAFYKTAKKTNSCCSFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ykt6-PA | 199 | CG1515-PA | 1..199 | 1..199 | 1011 | 100 | Plus |