BDGP Sequence Production Resources |
Search the DGRC for LD34406
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 344 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | mgr-RA |
Protein status: | LD34406.pep: gold |
Preliminary Size: | 1110 |
Sequenced Size: | 988 |
Gene | Date | Evidence |
---|---|---|
CG6719 | 2001-01-01 | Release 2 assignment |
CG6719 | 2003-01-14 | Blastp of sequenced clone |
CG6719 | 2008-04-29 | Release 5.5 accounting |
CG6719 | 2008-08-15 | Release 5.9 accounting |
CG6719 | 2008-12-18 | 5.12 accounting |
988 bp (988 high quality bases) assembled on 2003-01-14
GenBank Submission: BT003247
> LD34406.complete ATCGACTTTTACAGCGGCAGGCTGACCTCCTGAAAATTAAATTGCATTTG TAGACGGCACGGCTGAAGGCAACAGGATGACAGGAATAATGGACTCGGTG GAAATGCCCAAATTACCGGAAAACCAGAAGACCTTCGCCGGCATCCCGGA GGCAGTGTTCCTGGAGGAGATCGACACCTTCATGTCGCAGCCGGAGAACG AAAATTGCGAAAAGGTGCTGCAGCGACTGGACGAGCAGCACGGCAAGTAT CGATTCATGGCCTGCAATCTGGAGGCGCGGCGGCGCAAGTTGAAGTCTCA AATTCCGGACCTGGAGCGCTCCCTGGAAATGGTCAATGTGCTTCGCAAGG AGGACGAGGAGCGCGAGACGCAATTCCTGCTCAGCGACCAGGTGTTCATC AAGACACTGGTGCCGCCCACGAAAACAGTATACCTCTGGCTGGGGGCCAG CGTGATGCTGGAGTATCCGCTAGACGAGGCGGAGGCTCTGCTGAACCAGA ACATCACATCGGCCGTGGGCAACCTAAAGTCCGTGGAGCACGATCAGGAT TTTCTGAGGGATCAAATCACAACTACGGAGGTGAACATGGCGCGGGTCTA CAACTGGGGCGTGAAAAAGCGGCAGGCCGCTACCAAGACCACCGCCACTA CCCCATCCTAAGGAGACCCACCCAAATCCCATCCCAAGATCAACATCGGT AGCAGCCACTCGCATCTTATTTATTTCGACAGTACACCGCAAGGGCTCGG CAGGCGATTCCACCTGGCTTATTCTTGTTCTCCACTGATAGCAATAAAAC CGCCACACAAACGCATCAAGCTGACTCCAAACGAGATGCCTATTCCGGAG GAATGTAATATTTTAATTTGGCTACGGGCATTTAACTGCATGTAAACCGA ATAAACGGCGAACGCAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6719-RA | 1022 | CG6719-RA | 44..960 | 1..917 | 4585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7234679..7235075 | 559..163 | 1985 | 100 | Minus |
chr3R | 27901430 | chr3R | 7234260..7234620 | 917..557 | 1760 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 7235151..7235314 | 164..1 | 820 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11409209..11409605 | 559..163 | 1985 | 100 | Minus |
3R | 32079331 | 3R | 11408790..11409150 | 917..557 | 1805 | 100 | Minus |
3R | 32079331 | 3R | 11409681..11409844 | 164..1 | 820 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11150040..11150436 | 559..163 | 1985 | 100 | Minus |
3R | 31820162 | 3R | 11149621..11149981 | 917..557 | 1805 | 100 | Minus |
3R | 31820162 | 3R | 11150512..11150675 | 164..1 | 820 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle2 | 7220 | HMS-Beagle2 Beagle2 7220bp | 6515..6561 | 792..838 | 109 | 70.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7234262..7234618 | 559..915 | 99 | <- | Minus |
chr3R | 7234680..7235074 | 164..558 | 100 | <- | Minus |
chr3R | 7235152..7235314 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 1..585 | 77..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 1..585 | 77..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mgr-RA | 1..585 | 77..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 1..585 | 77..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mgr-RA | 1..585 | 77..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 34..948 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 44..958 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mgr-RA | 32..946 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6719-RA | 34..948 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mgr-RA | 32..946 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11409210..11409604 | 164..558 | 100 | <- | Minus |
3R | 11409682..11409844 | 1..163 | 100 | Minus | |
3R | 11408792..11409148 | 559..915 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11409210..11409604 | 164..558 | 100 | <- | Minus |
3R | 11409682..11409844 | 1..163 | 100 | Minus | |
3R | 11408792..11409148 | 559..915 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11409210..11409604 | 164..558 | 100 | <- | Minus |
3R | 11409682..11409844 | 1..163 | 100 | Minus | |
3R | 11408792..11409148 | 559..915 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7235404..7235566 | 1..163 | 100 | Minus | |
arm_3R | 7234514..7234870 | 559..915 | 100 | <- | Minus |
arm_3R | 7234932..7235326 | 164..558 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11149623..11149979 | 559..915 | 100 | <- | Minus |
3R | 11150041..11150435 | 164..558 | 100 | <- | Minus |
3R | 11150513..11150675 | 1..163 | 100 | Minus |
Translation from 76 to 660
> LD34406.pep MTGIMDSVEMPKLPENQKTFAGIPEAVFLEEIDTFMSQPENENCEKVLQR LDEQHGKYRFMACNLEARRRKLKSQIPDLERSLEMVNVLRKEDEERETQF LLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLDEAEALLNQNITSAVGNL KSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQAATKTTATTPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18161-PA | 194 | GF18161-PA | 1..194 | 1..194 | 992 | 94.8 | Plus |
Dana\GF13259-PA | 197 | GF13259-PA | 1..197 | 1..193 | 168 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17226-PA | 194 | GG17226-PA | 1..194 | 1..194 | 996 | 96.4 | Plus |
Dere\GG22129-PA | 182 | GG22129-PA | 1..182 | 1..181 | 205 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24010-PA | 196 | GH24010-PA | 1..196 | 1..194 | 972 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mgr-PA | 194 | CG6719-PA | 1..194 | 1..194 | 993 | 100 | Plus |
CG15676-PB | 182 | CG15676-PB | 1..181 | 1..180 | 209 | 28.6 | Plus |
CG15676-PA | 182 | CG15676-PA | 1..181 | 1..180 | 209 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10062-PA | 195 | GI10062-PA | 1..195 | 1..194 | 972 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12609-PA | 195 | GL12609-PA | 1..195 | 1..194 | 991 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19809-PA | 195 | GA19809-PA | 1..195 | 1..194 | 991 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26102-PA | 194 | GM26102-PA | 1..194 | 1..194 | 1033 | 99.5 | Plus |
Dsec\GM15853-PA | 182 | GM15853-PA | 1..181 | 1..180 | 215 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20662-PA | 194 | GD20662-PA | 1..194 | 1..194 | 1033 | 99.5 | Plus |
Dsim\GD11614-PA | 182 | GD11614-PA | 1..181 | 1..180 | 218 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23797-PA | 195 | GJ23797-PA | 1..195 | 1..194 | 981 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11798-PA | 195 | GK11798-PA | 1..192 | 1..192 | 984 | 95.3 | Plus |
Dwil\GK19015-PA | 192 | GK19015-PA | 1..179 | 1..178 | 244 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24626-PA | 194 | GE24626-PA | 1..194 | 1..194 | 1006 | 96.9 | Plus |
Translation from 76 to 660
> LD34406.hyp MTGIMDSVEMPKLPENQKTFAGIPEAVFLEEIDTFMSQPENENCEKVLQR LDEQHGKYRFMACNLEARRRKLKSQIPDLERSLEMVNVLRKEDEERETQF LLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLDEAEALLNQNITSAVGNL KSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQAATKTTATTPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mgr-PA | 194 | CG6719-PA | 1..194 | 1..194 | 993 | 100 | Plus |
CG15676-PB | 182 | CG15676-PB | 1..181 | 1..180 | 209 | 28.6 | Plus |
CG15676-PA | 182 | CG15676-PA | 1..181 | 1..180 | 209 | 28.6 | Plus |