BDGP Sequence Production Resources |
Search the DGRC for LD34409
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 344 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | Gdh-RE |
Protein status: | LD34409.pep: validated not full length |
Sequenced Size: | 1636 |
Gene | Date | Evidence |
---|---|---|
CG5320 | 2002-11-14 | Blastp of sequenced clone |
Gdh | 2008-04-29 | Release 5.5 accounting |
Gdh | 2008-08-15 | Release 5.9 accounting |
Gdh | 2008-12-18 | 5.12 accounting |
1636 bp (1636 high quality bases) assembled on 2002-11-14
GenBank Submission: BT001501
> LD34409.complete AGTAGCGAGCGGTTGTGTAGAACAGAATAAAAAAAGAGTTGGAACCCGAA GAATCCAAGCGATTAGCAGCATGTATCACCTGAAGATCAACCCTAAGGAG TACTCCGAGCACGAGCTGGAGAAGATCACCCGTCGCTTCACCCTTGAGTT GGCCAAGAAGGGCTTCATTGGACCCGGTGTCGATGTGCCCGCCCCCGACA TGGGAACCGGTGAGCGCGAGATGTCCTGGATTGCCGATACTTATGCCAAG ACCATCGGTCACCTGGACATCAATGCTCATGCCTGTGTCACCGGCAAGCC CATCAACCAGGGCGGTATCCACGGACGCGTCTCGGCCACCGGTCGCGGTG TCTTCCACGGCCTGGAGAACTTCATCAACGAGGCCAACTACATGAGCCAG ATCGGCACCACTCCCGGCTGGGGCGGCAAGACCTTCATCGTCCAGGGCTT CGGTAACGTGGGCCTGCACACCACTCGCTATCTGACCCGCGCCGGAGCCA CCTGCATCGGTGTCATTGAGCACGACGGCACTCTGTACAACCCGGAGGGC ATTGACCCTAAGCTGCTGGAGGACTACAAGAACGAGCACGGCACCATTGT GGGCTACCAGAACGCCAAGCCCTACGAGGGCGAGAACCTCATGTTCGAGA AGTGCGACATCTTCATTCCCGCTGCCGTCGAGAAGGTCATCACCAGCGAG AATGCCAACCGCATTCAAGCTAAGATCATTGCCGAGGCTGCCAACGGCCC CACCACCCCCGCTGCCGACAAGATCCTCATCGATCGCAACATCCTGGTCA TTCCCGATCTGTACATCAACGCCGGTGGTGTCACCGTCTCCTTCTTCGAG TGGCTGAAGAACCTGAACCACGTCTCGTACGGTCGCCTGACCTTCAAGTA TGAGCGCGAGTCCAACTACCATCTGCTTGAATCCGTTCAAGAGTCCCTGG AGCGTCGCTTCGGCCGTGTGGGCGGTCGCATCCCCGTGACCCCCTCCGAG TCGTTCCAGAAGCGCATCTCCGGCGCCTCCGAGAAGGATATCGTGCACTC CGGCCTGGACTACACCATGGAGCGCTCCGCCCGCGCCATCATGAAGACAG CCATGAAGTACAACCTGGGCCTGGACCTCAGAACCGCTGCCTACGTCAAC TCCATTGAGAAGATCTTCACCACATACCGCGATGCCGGCCTGGCCTTCTA AGCCCGCTGAGTGTGCTGATTAGCCCCCAGACTCTTAACTAGTTAATTAA GCAATCGAACTCAAGAGCATAACTATTGCTATTGCTCCATGCACCGCCGT CTTAGATGAAAAGTCACAAAACCGAAATGCAAGAATCGTAATTTATATCT ATGGCAATTGGAGCTGGCCAAAATAACTCTTTTAAAAAACAAAGCAAAAC AAAAGCGAACTTTCGCCCGTGTTTCGTATTAAGTTGAACAAGTTGCGAGC TTATTATTGTTGATTTTCTGTAATTTTTAAGTTAATGAGCGTCAAAGTGA AGCAATTGCATTTTCAATTATGTATCGCAACGTCTCGTACCGTCAAGTCA CGTTTATCGTACGATCGCTCCGTTGCCGTAACATTAAAATAATCAAATAT ACACAAAACTAAACTCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdh-RF | 2159 | Gdh-RF | 620..2159 | 80..1619 | 7700 | 100 | Plus |
Gdh-RA | 2197 | Gdh-RA | 619..1484 | 80..945 | 4255 | 99.4 | Plus |
Gdh-RB | 1830 | Gdh-RB | 254..1119 | 80..945 | 4255 | 99.4 | Plus |
Gdh-RA | 2197 | Gdh-RA | 1507..2197 | 929..1619 | 3455 | 100 | Plus |
Gdh-RB | 1830 | Gdh-RB | 1142..1830 | 929..1617 | 3445 | 100 | Plus |
Gdh-RA | 2197 | Gdh-RA | 21..106 | 1..86 | 430 | 100 | Plus |
Gdh-RF | 2159 | Gdh-RF | 22..107 | 1..86 | 430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19759388..19760076 | 1617..929 | 3430 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 19761550..19761875 | 405..80 | 1615 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 19761162..19761482 | 724..404 | 1605 | 100 | Minus |
chr3R | 27901430 | chr3R | 19760855..19761059 | 927..723 | 1025 | 100 | Minus |
chr3R | 27901430 | chr3R | 19766425..19766510 | 86..1 | 415 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23935955..23936646 | 1620..929 | 3460 | 100 | Minus |
3R | 32079331 | 3R | 23938120..23938445 | 405..80 | 1630 | 100 | Minus |
3R | 32079331 | 3R | 23937732..23938052 | 724..404 | 1605 | 100 | Minus |
3R | 32079331 | 3R | 23937423..23937629 | 929..723 | 1035 | 100 | Minus |
3R | 32079331 | 3R | 23942996..23943081 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23676786..23677477 | 1620..929 | 3460 | 100 | Minus |
3R | 31820162 | 3R | 23678951..23679276 | 405..80 | 1630 | 100 | Minus |
3R | 31820162 | 3R | 23678563..23678883 | 724..404 | 1605 | 100 | Minus |
3R | 31820162 | 3R | 23678254..23678460 | 929..723 | 1035 | 100 | Minus |
3R | 31820162 | 3R | 23683827..23683912 | 86..1 | 430 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19766425..19766510 | 1..86 | 98 | Minus | |
chr3R | 19761551..19761869 | 87..404 | 99 | <- | Minus |
chr3R | 19761162..19761481 | 405..724 | 100 | <- | Minus |
chr3R | 19759388..19760075 | 930..1617 | 99 | <- | Minus |
chr3R | 19760853..19761057 | 725..929 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 529..1650 | 80..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 529..1650 | 80..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 529..1650 | 80..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 529..1650 | 80..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 529..1650 | 80..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RE | 1..1618 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 22..105 | 1..85 | 98 | -> | Plus |
Gdh-RF | 626..2157 | 86..1617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 21..104 | 1..85 | 98 | -> | Plus |
Gdh-RF | 625..2156 | 86..1617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RE | 1..1618 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdh-RF | 21..104 | 1..85 | 98 | -> | Plus |
Gdh-RF | 625..2156 | 86..1617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23935958..23936645 | 930..1617 | 100 | <- | Minus |
3R | 23937423..23937627 | 725..929 | 100 | <- | Minus |
3R | 23937732..23938051 | 405..724 | 100 | <- | Minus |
3R | 23938121..23938439 | 87..404 | 99 | <- | Minus |
3R | 23942996..23943081 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23935958..23936645 | 930..1617 | 100 | <- | Minus |
3R | 23937423..23937627 | 725..929 | 100 | <- | Minus |
3R | 23937732..23938051 | 405..724 | 100 | <- | Minus |
3R | 23938121..23938439 | 87..404 | 99 | <- | Minus |
3R | 23942996..23943081 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23935958..23936645 | 930..1617 | 100 | <- | Minus |
3R | 23937423..23937627 | 725..929 | 100 | <- | Minus |
3R | 23937732..23938051 | 405..724 | 100 | <- | Minus |
3R | 23938121..23938439 | 87..404 | 99 | <- | Minus |
3R | 23942996..23943081 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19761680..19762367 | 930..1617 | 100 | <- | Minus |
arm_3R | 19763145..19763349 | 725..929 | 100 | <- | Minus |
arm_3R | 19763454..19763773 | 405..724 | 100 | <- | Minus |
arm_3R | 19763843..19764161 | 87..404 | 99 | <- | Minus |
arm_3R | 19768718..19768803 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23678952..23679270 | 87..404 | 99 | <- | Minus |
3R | 23683827..23683912 | 1..86 | 100 | Minus | |
3R | 23676789..23677476 | 930..1617 | 100 | <- | Minus |
3R | 23678254..23678458 | 725..929 | 100 | <- | Minus |
3R | 23678563..23678882 | 405..724 | 100 | <- | Minus |
Translation from 70 to 1200
> LD34409.pep MYHLKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGERE MSWIADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLEN FINEANYMSQIGTTPGWGGKTFIVQGFGNVGLHTTRYLTRAGATCIGVIE HDGTLYNPEGIDPKLLEDYKNEHGTIVGYQNAKPYEGENLMFEKCDIFIP AAVEKVITSENANRIQAKIIAEAANGPTTPAADKILIDRNILVIPDLYIN AGGVTVSFFEWLKNLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRV GGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKYNLG LDLRTAAYVNSIEKIFTTYRDAGLAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17976-PA | 561 | GF17976-PA | 176..561 | 4..376 | 1967 | 96.1 | Plus |
Dana\GF18014-PA | 535 | GF18014-PA | 165..533 | 4..375 | 881 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12388-PA | 562 | GG12388-PA | 177..562 | 4..376 | 1975 | 96.4 | Plus |
Dere\GG12444-PA | 535 | GG12444-PA | 167..533 | 6..375 | 916 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19680-PA | 557 | GH19680-PA | 172..557 | 4..376 | 1935 | 94.3 | Plus |
Dgri\GH20746-PA | 535 | GH20746-PA | 165..533 | 4..375 | 909 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdh-PD | 391 | CG5320-PD | 19..391 | 4..376 | 1955 | 100 | Plus |
Gdh-PF | 549 | CG5320-PF | 177..549 | 4..376 | 1955 | 100 | Plus |
Gdh-PB | 404 | CG5320-PB | 19..404 | 4..376 | 1931 | 96.6 | Plus |
Gdh-PA | 562 | CG5320-PA | 177..562 | 4..376 | 1931 | 96.6 | Plus |
bb8-PA | 535 | CG4434-PA | 167..533 | 6..375 | 878 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22276-PA | 557 | GI22276-PA | 172..557 | 4..376 | 1935 | 94.3 | Plus |
Dmoj\GI23213-PA | 522 | GI23213-PA | 154..520 | 4..375 | 935 | 49.5 | Plus |
Dmoj\GI23212-PA | 507 | GI23212-PA | 138..505 | 4..375 | 925 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24163-PA | 561 | GL24163-PA | 176..561 | 4..376 | 1960 | 95.9 | Plus |
Dper\GL23033-PA | 533 | GL23033-PA | 163..531 | 4..375 | 908 | 48.5 | Plus |
Dper\GL15416-PA | 77 | GL15416-PA | 1..63 | 314..376 | 171 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18802-PB | 548 | GA18802-PB | 176..548 | 4..376 | 1983 | 99.2 | Plus |
Dpse\GA18802-PA | 561 | GA18802-PA | 176..561 | 4..376 | 1960 | 95.9 | Plus |
Dpse\GA18802-PC | 404 | GA18802-PC | 19..404 | 4..376 | 1954 | 95.9 | Plus |
Dpse\GA23808-PA | 529 | GA23808-PA | 165..528 | 6..374 | 947 | 50.5 | Plus |
Dpse\GA18181-PA | 533 | GA18181-PA | 163..531 | 4..375 | 901 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23525-PA | 558 | GM23525-PA | 177..558 | 4..376 | 1976 | 97.4 | Plus |
Dsec\GM23576-PA | 535 | GM23576-PA | 167..533 | 6..375 | 896 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18335-PA | 562 | GD18335-PA | 177..562 | 4..376 | 1978 | 96.6 | Plus |
Dsim\GD18391-PA | 535 | GD18391-PA | 167..533 | 6..375 | 896 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24069-PA | 557 | GJ24069-PA | 172..557 | 4..376 | 1942 | 94.8 | Plus |
Dvir\GJ22871-PA | 507 | GJ22871-PA | 138..505 | 4..375 | 924 | 49.3 | Plus |
Dvir\GJ22872-PA | 535 | GJ22872-PA | 165..533 | 4..375 | 923 | 48.9 | Plus |
Translation from 199 to 1200
> LD34409.hyp MGTGEREMSWIADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRG VFHGLENFINEANYMSQIGTTPGWGGKTFIVQGFGNVGLHTTRYLTRAGA TCIGVIEHDGTLYNPEGIDPKLLEDYKNEHGTIVGYQNAKPYEGENLMFE KCDIFIPAAVEKVITSENANRIQAKIIAEAANGPTTPAADKILIDRNILV IPDLYINAGGVTVSFFEWLKNLNHVSYGRLTFKYERESNYHLLESVQESL ERRFGRVGGRIPVTPSESFQKRISGASEKDIVHSGLDYTMERSARAIMKT AMKYNLGLDLRTAAYVNSIEKIFTTYRDAGLAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdh-PD | 391 | CG5320-PD | 59..391 | 1..333 | 1746 | 100 | Plus |
Gdh-PF | 549 | CG5320-PF | 217..549 | 1..333 | 1746 | 100 | Plus |
Gdh-PB | 404 | CG5320-PB | 59..404 | 1..333 | 1722 | 96.2 | Plus |
Gdh-PA | 562 | CG5320-PA | 217..562 | 1..333 | 1722 | 96.2 | Plus |
CG4434-PA | 535 | CG4434-PA | 205..533 | 1..332 | 741 | 47.1 | Plus |