BDGP Sequence Production Resources |
Search the DGRC for LD34429
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 344 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Krn-RA |
Protein status: | LD34429.pep: gold |
Preliminary Size: | 1409 |
Sequenced Size: | 1340 |
Gene | Date | Evidence |
---|---|---|
CG32179 | 2001-09-19 | Blastp of sequenced clone |
Krn | 2008-04-29 | Release 5.5 accounting |
Krn | 2008-08-15 | Release 5.9 accounting |
CG32177 | 2008-08-15 | Release 5.9 accounting |
Krn | 2008-12-18 | 5.12 accounting |
CG32177 | 2008-12-18 | 5.12 accounting |
1340 bp (1340 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060409
> LD34429.complete ATTTGTTTTTTTCGCTTCGCTCGCGAAGTGAGCCCAGTTTTAAATTATTT AAATTGCGTATAGTGAAGCCACTTGAAAGCGAAACGCCTACTGTCGCAGT TCTGCCAAAAAACCAACAGTATTAGCTGTGTGCGTGTTTGGCAACAACAA GTCAACAAAATTCGAACAAAATCAATAAAACGGAAACGTGAGAGAGCGCT GCGCAAAAGAGAAAAGCGAACGCAATCGCAATCGACCAACGCATAGAAGA AAACAAGCCGCCTGCCAGCCAAAGCCAAGAATTCCACATTACAAAACACC TTAAACTGCATTGCCACATTCCCAAGTAAGCTGCCATGAGTTAAGATCAA GATGCGAGCCCAGGATCTGCTGCTGCTTGCCACCGCTTTAATCGGCGCTT ACCTACCGCTCACCGCCGCCTGTTCCTCGCGTGCCATCGCTAAGCCGCGG CCAACAGCTGCACCGATCCTGCCGCCGGATAATGTGGAAATATCCACAAC GCCGAGACCGAATGTCACCTTCCCGATCTTCGCCTGTCCACCGACCTATG TCGCCTGGTATTGCCTGAACGATGGCACCTGCTTTACGGTGAAGATCCAC AATGAAATCCTATACAACTGCGAATGTGCGCTGGGATTTATGGGTCCGAG GTGCGAGTACAAGGAGATTGATGGCTCGTACCTGCCAACCAGGAACCGTG TGATGCTAGAGAAGGCCAGCATTGTTAGCGGAGCAACGCTGGCCCTTCTG TTTATGGCCATGTGCTGTGTGGTTTTGTATCTGCGACACGAGAAGCTGCA AAAACAAAAGCTGCACGACAGCACCACAACCACAACGACCGACGGTGGCT GTCAGAACGAGGGCATGGACGAGGTGGATGGCTTGCGACCCTTACGTCCA GTGAGACGTCCCTTTGGACCCTGCCGCATCCTATCGCTGGAGGAGGCCCA CCTTCAAGCGAAAGCCTCCAATCGCCCCAGGCATTGCAACGAACTTTTGC GCTAACTAATTAGCCTGGCTGCTCATTTGTTTTTAAATGTCTAACATGTC CAACTGTTTATTTTAACTGCTAAACGAAACTATTATTTTTGCCATCTGAT TGAGATGGCGAATGCCGTAGTTCTAAGTGCCTACTGACGTGCCTATAACA CATTTAGATCAAGTATTAACGAACGAAAACTGATTGCTCAGAGAGAGATA AAAATAAATCTAGATATAATTCAATGCAATTTTGGCAGCTAGCCGCCCAT TTATTTATTATACACCTAATTTTATTAAAAAAAAAAACGCGTGAACTAAT ATCGTCAATAAAAGCGAGAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NOF | 4347 | NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). | 491..634 | 180..33 | 118 | 55.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17639157..17640221 | 258..1322 | 98 | <- | Minus |
chr3L | 17643587..17643843 | 1..257 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 1..654 | 352..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 1..654 | 352..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 1..654 | 352..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 1..654 | 352..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 1..654 | 352..1005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 29..1348 | 1..1320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 29..1348 | 1..1320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 33..1354 | 1..1322 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 29..1348 | 1..1320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Krn-RA | 33..1354 | 1..1322 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17649562..17650626 | 258..1322 | 100 | <- | Minus |
3L | 17653992..17654248 | 1..257 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17649562..17650626 | 258..1322 | 100 | <- | Minus |
3L | 17653992..17654248 | 1..257 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17649562..17650626 | 258..1322 | 100 | <- | Minus |
3L | 17653992..17654248 | 1..257 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17647092..17647348 | 1..257 | 100 | Minus | |
arm_3L | 17642662..17643726 | 258..1322 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17642662..17643726 | 258..1322 | 100 | <- | Minus |
3L | 17647092..17647348 | 1..257 | 100 | Minus |
Translation from 351 to 1004
> LD34429.hyp MRAQDLLLLATALIGAYLPLTAACSSRAIAKPRPTAAPILPPDNVEISTT PRPNVTFPIFACPPTYVAWYCLNDGTCFTVKIHNEILYNCECALGFMGPR CEYKEIDGSYLPTRNRVMLEKASIVSGATLALLFMAMCCVVLYLRHEKLQ KQKLHDSTTTTTTDGGCQNEGMDEVDGLRPLRPVRRPFGPCRILSLEEAH LQAKASNRPRHCNELLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Krn-PA | 217 | CG32179-PA | 1..217 | 1..217 | 1162 | 100 | Plus |
spi-PF | 234 | CG10334-PF | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PG | 234 | CG10334-PG | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PA | 234 | CG10334-PA | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PB | 234 | CG10334-PB | 11..176 | 8..156 | 404 | 50.6 | Plus |
Translation from 351 to 1004
> LD34429.pep MRAQDLLLLATALIGAYLPLTAACSSRAIAKPRPTAAPILPPDNVEISTT PRPNVTFPIFACPPTYVAWYCLNDGTCFTVKIHNEILYNCECALGFMGPR CEYKEIDGSYLPTRNRVMLEKASIVSGATLALLFMAMCCVVLYLRHEKLQ KQKLHDSTTTTTTDGGCQNEGMDEVDGLRPLRPVRRPFGPCRILSLEEAH LQAKASNRPRHCNELLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23898-PA | 209 | GF23898-PA | 1..209 | 1..213 | 875 | 80.6 | Plus |
Dana\GF15623-PA | 225 | GF15623-PA | 1..164 | 7..153 | 381 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15794-PA | 217 | GG15794-PA | 1..217 | 1..217 | 1115 | 96.3 | Plus |
Dere\GG21620-PA | 230 | GG21620-PA | 7..169 | 8..153 | 359 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15347-PA | 227 | GH15347-PA | 30..227 | 23..211 | 721 | 72.7 | Plus |
Dgri\GH13498-PA | 245 | GH13498-PA | 5..174 | 6..156 | 391 | 50.3 | Plus |
Dgri\GH13960-PA | 187 | GH13960-PA | 11..116 | 51..156 | 361 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Krn-PA | 217 | CG32179-PA | 1..217 | 1..217 | 1162 | 100 | Plus |
spi-PF | 234 | CG10334-PF | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PG | 234 | CG10334-PG | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PA | 234 | CG10334-PA | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PB | 234 | CG10334-PB | 11..176 | 8..156 | 404 | 50.6 | Plus |
spi-PE | 234 | CG10334-PE | 11..176 | 8..156 | 404 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12950-PA | 216 | GI12950-PA | 1..216 | 1..211 | 772 | 70.5 | Plus |
Dmoj\GI17249-PA | 231 | GI17249-PA | 18..163 | 20..148 | 346 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25227-PA | 231 | GL25227-PA | 1..231 | 1..213 | 810 | 72.5 | Plus |
Dper\GL26227-PA | 241 | GL26227-PA | 18..203 | 9..179 | 402 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16736-PA | 231 | GA16736-PA | 1..231 | 1..213 | 811 | 72.5 | Plus |
Dpse\GA28085-PA | 230 | GA28085-PA | 7..192 | 9..179 | 402 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24318-PA | 217 | GM24318-PA | 1..217 | 1..217 | 1137 | 98.2 | Plus |
Dsec\GM16998-PA | 230 | GM16998-PA | 7..172 | 8..156 | 355 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12388-PA | 217 | GD12388-PA | 1..217 | 1..217 | 1137 | 98.2 | Plus |
Dsim\GD21745-PA | 230 | GD21745-PA | 7..172 | 8..156 | 359 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13094-PA | 215 | GJ13094-PA | 5..215 | 7..211 | 769 | 72 | Plus |
Dvir\GJ18009-PA | 233 | GJ18009-PA | 18..188 | 20..174 | 381 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12333-PA | 236 | GK12333-PA | 26..236 | 18..211 | 743 | 73.9 | Plus |
Dwil\GK15227-PA | 252 | GK15227-PA | 25..184 | 20..159 | 332 | 48.1 | Plus |
Dwil\GK18382-PA | 325 | GK18382-PA | 204..263 | 54..113 | 143 | 40 | Plus |