BDGP Sequence Production Resources |
Search the DGRC for LD34464
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 344 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | gus-RI |
Protein status: | LD34464.pep: gold |
Preliminary Size: | 1993 |
Sequenced Size: | 1790 |
Gene | Date | Evidence |
---|---|---|
CG2944 | 2001-01-01 | Release 2 assignment |
CG2944 | 2002-06-06 | Blastp of sequenced clone |
CG2944 | 2003-01-01 | Sim4 clustering to Release 3 |
gus | 2008-04-29 | Release 5.5 accounting |
gus | 2008-08-15 | Release 5.9 accounting |
gus | 2008-12-18 | 5.12 accounting |
1790 bp (1790 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119609
> LD34464.complete CTACTTATATTGTGATCGGACAACCCGTGTGTTATCTTAAATAACAAATT TTTTATTTCGTTGAAAATAGTTGTTTGTTTCGTTTATATTTTAAATACTT TCTACATATTTCTGTGCATAATGAACATAACGATTTCACAACTAAGCAAG AAAAGAAATTAACTTCACTCGGTGACGCCATTTTGTCCAATTTTTATATA CTGCTTTATAAATGGAATTTGGTAAAAAAAGGTATAAGGGTGGTCGGACA CCTTCTATTAGGTCCAGTGAAAGGCGTCGTCCTCAAAGTGTTTCATCTAT ATCCACACTATCCCCGAGAGTTGTTTTGTCCAGATTGGAGCCGAGGGAGT TTGAACGTCTTCGACTATCCTACAAAATTGCAATCGACCAAAGAAGATCC AGAAGCTGCCGTGGCATGAACATGGGTCAAAAAATTAGTGGCGGAGTCAA AACAGTTAGTCGCAATGATTCACAGTCTACATTTAAACCAATAATACCAA GAGAGTTGCAAGCTGATTTCGTTAAACCAGCGCGAATCGATATATTACTT GATATGCCGCCAGCATCTCGAGATCTTCAATTGAAGCATTCATGGAACTC CGAAGATCGGTCTCTTAACATTTTTGTAAAAGAGGACGACAAGTTGACAT TTCATAGGCACCCAGTGGCTCAAAGTACTGACTGTATTCGCGGAAAAGTC GGACTTACAAAGGGATTGCATATTTGGGAAATTTATTGGCCAACAAGGCA AAGAGGAACCCACGCTGTTGTTGGCGTATGCACTGCAGATGCACCTTTAC ATTCAGTTGGCTACCAAAGTTTAGTTGGATCAACTGAACAAAGTTGGGGC TGGGACTTAGGAAGAAATAAATTATACCATGACTCAAAAAACTGCGCTGG AGTGACATATCCAGCAATTCTTAAAAACGACGAAGCTTTTTTAGTTCCAG ATAAGTTCTTAGTAGCGTTAGATATGGACGAAGGAACACTAAGCTTCATT GTTGATCAGCAGTACCTCGGTATTGCGTTTAGAGGACTGCGAGGGAAAAA ACTATATCCAATTGTTTCGGCGGTCTGGGGACACTGTGAAATAACAATGC GTTACATTGGTGGATTAGATCCCGAACCCTTGCCCCTAATGGATCTTTGC CGAAGAACAATTCGTCAAAAAATTGGTCGCACAAACTTGGAGGAGCACAT TCAACAGCTTCAACTTCCTTTATCAATGAAAACATATTTATTGTATAAAA ACCGTAGATAATAGTTTTGTTAAGTAGATGGAGGAGCAATTTCAATTTTT GCTGCATGTGATGAAAGCAGCAAATACTAATTGTGTTAGATTATAATAGT ATTAGATCAATGTTTGTCTGTCCTCCAACAGGAAAATCATAGGTATACAA TTCGTAATAATACTTTACTTAAGCTATAAAGATTGATTGTATATTAAGAA GCATTCAAATAATAGTATGTACACGGAATGACATCTCATCTTGCAATAAA TTGGAGAATCGAGTTTCTTCATGTAACATTATTTAAAAACTATACTCACT TCGTGTTATATAAAAAGCATATTTGTATAAATATTAAAACTTAAAAAGCG CAGTTTTAATTAAATGTATGTATGTATAAATAATTCTAACAATATTTAAC ATGAAAAGCTCTGAAAGTAATTGGTTTACTTTTTATAAATATATTTCGGG AGAAAAACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gus-RF | 2036 | gus-RF | 526..2011 | 229..1714 | 7430 | 100 | Plus |
gus.j | 2058 | gus.j | 341..1823 | 232..1714 | 7415 | 100 | Plus |
gus-RC | 1883 | gus-RC | 401..1883 | 232..1714 | 7415 | 100 | Plus |
gus-RF | 2036 | gus-RF | 110..343 | 1..234 | 1170 | 100 | Plus |
gus.j | 2058 | gus.j | 38..271 | 1..234 | 1170 | 100 | Plus |
gus-RC | 1883 | gus-RC | 98..331 | 1..234 | 1170 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1008241..1009133 | 1121..229 | 4435 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 1004702..1005291 | 1711..1122 | 2935 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 1009457..1009690 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 5120763..5121655 | 1121..229 | 4465 | 100 | Minus |
2R | 25286936 | 2R | 5117210..5117802 | 1714..1122 | 2965 | 100 | Minus |
2R | 25286936 | 2R | 5121980..5122213 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 5121962..5122854 | 1121..229 | 4465 | 100 | Minus |
2R | 25260384 | 2R | 5118409..5119001 | 1714..1122 | 2965 | 100 | Minus |
2R | 25260384 | 2R | 5123179..5123412 | 234..1 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 278..444 | 1394..1556 | 138 | 59.2 | Plus |
invader3 | 5484 | invader3 INVADER3 5484bp | 5052..5148 | 1577..1670 | 135 | 64.3 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 7526..7669 | 1394..1533 | 131 | 61 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1004702..1005291 | 1122..1711 | 99 | <- | Minus |
chr2R | 1008241..1009130 | 232..1121 | 99 | <- | Minus |
chr2R | 1009460..1009690 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RA | 1..1050 | 212..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RK | 1..840 | 422..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RA | 1..1050 | 212..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RK | 1..840 | 422..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RF | 38..268 | 1..231 | 100 | -> | Plus |
gus-RF | 457..1936 | 232..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RF | 38..268 | 1..231 | 100 | -> | Plus |
gus-RF | 457..1936 | 232..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RG | 35..1745 | 1..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RF | 38..268 | 1..231 | 100 | -> | Plus |
gus-RF | 457..1936 | 232..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gus-RG | 35..1745 | 1..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5117213..5117802 | 1122..1711 | 100 | <- | Minus |
2R | 5120763..5121652 | 232..1121 | 100 | <- | Minus |
2R | 5121983..5122213 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5117213..5117802 | 1122..1711 | 100 | <- | Minus |
2R | 5120763..5121652 | 232..1121 | 100 | <- | Minus |
2R | 5121983..5122213 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5117213..5117802 | 1122..1711 | 100 | <- | Minus |
2R | 5120763..5121652 | 232..1121 | 100 | <- | Minus |
2R | 5121983..5122213 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1004718..1005307 | 1122..1711 | 100 | <- | Minus |
arm_2R | 1008268..1009157 | 232..1121 | 100 | <- | Minus |
arm_2R | 1009488..1009718 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5118412..5119001 | 1122..1711 | 100 | <- | Minus |
2R | 5121962..5122851 | 232..1121 | 100 | <- | Minus |
2R | 5123182..5123412 | 1..231 | 100 | Minus |
Translation from 211 to 1260
> LD34464.pep MEFGKKRYKGGRTPSIRSSERRRPQSVSSISTLSPRVVLSRLEPREFERL RLSYKIAIDQRRSRSCRGMNMGQKISGGVKTVSRNDSQSTFKPIIPRELQ ADFVKPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRH PVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVG YQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFL VALDMDEGTLSFIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIG GLDPEPLPLMDLCRRTIRQKIGRTNLEEHIQQLQLPLSMKTYLLYKNRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12960-PA | 255 | GF12960-PA | 81..250 | 126..300 | 388 | 45.7 | Plus |
Dana\GF15713-PA | 304 | GF15713-PA | 74..279 | 127..343 | 228 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23140-PA | 349 | GG23140-PA | 1..349 | 1..349 | 1855 | 99.1 | Plus |
Dere\GG22511-PA | 255 | GG22511-PA | 81..250 | 126..300 | 387 | 45.7 | Plus |
Dere\GG25044-PA | 301 | GG25044-PA | 56..271 | 117..343 | 240 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13013-PA | 349 | GH13013-PA | 1..349 | 1..349 | 1757 | 92.3 | Plus |
Dgri\GH21169-PA | 252 | GH21169-PA | 78..247 | 126..300 | 395 | 46.9 | Plus |
Dgri\GH11484-PA | 283 | GH11484-PA | 36..256 | 112..343 | 230 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gus-PM | 279 | CG2944-PM | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PL | 279 | CG2944-PL | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PK | 279 | CG2944-PK | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PJ | 279 | CG2944-PJ | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PI | 279 | CG2944-PI | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PH | 279 | CG2944-PH | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PG | 279 | CG2944-PG | 1..279 | 71..349 | 1486 | 100 | Plus |
Fsn-PA | 255 | CG4643-PA | 81..250 | 126..300 | 394 | 45.7 | Plus |
Fsn-PB | 255 | CG4643-PB | 81..250 | 126..300 | 394 | 45.7 | Plus |
SP555-PD | 293 | CG14041-PD | 19..271 | 56..343 | 238 | 28.2 | Plus |
SP555-PB | 293 | CG14041-PB | 19..271 | 56..343 | 238 | 28.2 | Plus |
SP555-PC | 301 | CG14041-PC | 19..271 | 56..343 | 238 | 28.2 | Plus |
SP555-PA | 301 | CG14041-PA | 19..271 | 56..343 | 238 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18267-PA | 349 | GI18267-PA | 1..349 | 1..349 | 1761 | 92.6 | Plus |
Dmoj\GI18764-PA | 252 | GI18764-PA | 78..247 | 126..300 | 395 | 46.3 | Plus |
Dmoj\GI16979-PA | 316 | GI16979-PA | 85..290 | 127..343 | 208 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15433-PA | 349 | GL15433-PA | 1..349 | 1..349 | 1808 | 96 | Plus |
Dper\GL10506-PA | 255 | GL10506-PA | 81..250 | 126..300 | 393 | 46.9 | Plus |
Dper\GL26545-PA | 292 | GL26545-PA | 51..270 | 119..343 | 227 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23998-PA | 349 | GA23998-PA | 1..349 | 1..349 | 1808 | 96 | Plus |
Dpse\GA18323-PA | 255 | GA18323-PA | 81..250 | 126..300 | 393 | 46.9 | Plus |
Dpse\GA12721-PA | 292 | GA12721-PA | 51..270 | 119..343 | 227 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26734-PA | 349 | GM26734-PA | 1..349 | 1..349 | 1865 | 100 | Plus |
Dsec\GM20297-PA | 255 | GM20297-PA | 64..250 | 110..300 | 389 | 43.8 | Plus |
Dsec\GM18519-PA | 301 | GM18519-PA | 56..271 | 117..343 | 238 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16681-PA | 349 | GD16681-PA | 1..349 | 1..349 | 1865 | 100 | Plus |
Dsim\GD25778-PA | 245 | GD25778-PA | 81..240 | 126..300 | 331 | 41.7 | Plus |
Dsim\GD12021-PA | 301 | GD12021-PA | 56..271 | 117..343 | 238 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21895-PA | 349 | GJ21895-PA | 1..349 | 1..349 | 1761 | 92.3 | Plus |
Dvir\GJ21788-PA | 252 | GJ21788-PA | 78..247 | 126..300 | 393 | 46.3 | Plus |
Dvir\GJ17226-PA | 299 | GJ17226-PA | 53..272 | 113..343 | 226 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14868-PA | 349 | GK14868-PA | 1..349 | 1..349 | 1785 | 94.6 | Plus |
Dwil\GK22006-PA | 255 | GK22006-PA | 81..250 | 126..300 | 389 | 46.3 | Plus |
Dwil\GK24858-PA | 301 | GK24858-PA | 64..276 | 117..343 | 218 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\gus-PA | 349 | GE11348-PA | 1..349 | 1..349 | 1851 | 98.9 | Plus |
Dyak\GE13381-PA | 255 | GE13381-PA | 81..250 | 126..300 | 380 | 45.1 | Plus |
Dyak\GE11313-PA | 303 | GE11313-PA | 58..273 | 117..343 | 235 | 28.3 | Plus |
Translation from 211 to 1260
> LD34464.hyp MEFGKKRYKGGRTPSIRSSERRRPQSVSSISTLSPRVVLSRLEPREFERL RLSYKIAIDQRRSRSCRGMNMGQKISGGVKTVSRNDSQSTFKPIIPRELQ ADFVKPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRH PVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVG YQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFL VALDMDEGTLSFIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIG GLDPEPLPLMDLCRRTIRQKIGRTNLEEHIQQLQLPLSMKTYLLYKNRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gus-PM | 279 | CG2944-PM | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PL | 279 | CG2944-PL | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PK | 279 | CG2944-PK | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PJ | 279 | CG2944-PJ | 1..279 | 71..349 | 1486 | 100 | Plus |
gus-PI | 279 | CG2944-PI | 1..279 | 71..349 | 1486 | 100 | Plus |