BDGP Sequence Production Resources |
Search the DGRC for LD34766
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 347 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | TfIIS-RA |
Protein status: | LD34766.pep: gold |
Preliminary Size: | 1758 |
Sequenced Size: | 1708 |
Gene | Date | Evidence |
---|---|---|
CG3710 | 2001-01-01 | Release 2 assignment |
CG3710 | 2001-07-04 | Blastp of sequenced clone |
CG3710 | 2003-01-01 | Sim4 clustering to Release 3 |
TfIIS | 2008-04-29 | Release 5.5 accounting |
TfIIS | 2008-08-15 | Release 5.9 accounting |
TfIIS | 2008-12-18 | 5.12 accounting |
1708 bp (1708 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051843
> LD34766.complete TCAACTCGTTCTGCGAATACAGAAACGAAAAAAATAGTAAACAACATTTA TTGGAGGGAAAAAAAGAAATAGCCCGGCTTCCGCATAAACAACTGTCGCA GACCCGCAGCACCGATTAAAGCCGACAGCCGACGCCAGTTAACCTAACCT CTGATCAAATTAAGTGGGCCAAAATGAGCGTGGAGGAGGAAGTGTTTCGA ATCCAAAAGAAGATGAGCAAGATGGCCAGCGACGGCACAGGACAGGATCA GGCTCTGGACCTGCTGAAGGCCCTGCAAACGCTTAACATCAATCTCGACA TTCTGACCAAAACGCGCATCGGCATGACCGTAAACGAGCTGCGCAAGAGT AGCAAGGACGACGAGGTGATCGCTCTGGCCAAGACGCTGATCAAGAACTG GAAACGATTCCTCGCCAGCCCGGCGCCAACCACACCGAACAACAGCTCCG CTAAGGAGGGCTCCTCCAACAACAGCAGTGCCTCGAAGTCCACCAGTGCC GCCAAGTCGTCGTCGTCAATCTCCGGCAAGGATAAGTCCAGTTCATCCAG CTCATCCAAGGATAAAGAGAAGAAAGGCTCGACATCCTCGTCACAGACCT CGTTTCCCTCCGGCGGCATGACAGATGCGGTCCGCATCAAATGCCGCGAA ATGCTGGCCACCGCACTGAAGATTGGTGAAGTGCCCGAAGGATGCGGTGA GCCGGAGGAAATGGCCGCCGAACTGGAGGATGCCATTTACTCCGAGTTCA ATAACACGGATATGAAGTACAAGAATCGCATTAGGTCACGCGTGGCCAAT CTGAAGGACCCCAAAAATCCTGGATTGCGAGGCAACTTTATGTGCGGCGC CGTCACTGCCAAGCAGCTGGCCAAAATGACGCCGGAGGAGATGGCCAGCG ATGAGATGAAGAAGCTGCGCGAGAAGTTCGTCAAGGAGGCCATCAACGAT GCCCAGCTGGCCACCGTGCAGGGCACCAAGACCGATCTCCTCAAGTGCGC CAAGTGCAAGAAGCGCAACTGCACCTACAACCAGCTGCAGACTCGTTCCG CCGATGAACCTATGACCACCTTCGTCATGTGCAACGAGTGCGGCAACCGA TGGAAGTTCTGCTAACTCCCAAAATTGTTCCAAAATATAAATCAATCCCA AATGAGCACACACCACACATCCTTCATATTCTTAAATGAAACATTGTAAA GACACGACACGCGAGAAAACATTTTGTATCTGCTGCCCAACTGCGGAGGC GTTTACTCTGACCACCTAAACCTTAAACGAGAGAAAAGAAATTTCAATAA ACATTAACTATTGATAAAACGGAGACGTCTTGTTGCCGCAATCAGTTTTT TAAAAACGCCGGTGATAACGACCACGCTGCTGATAACTCGCCGATAACAC AGCGGGGCGATAAATTGAGCATTGAGCAAAGTAAATATGAATACATTATA AATATAACTCAGAATGATCTAGCAGAGAAGTAAATAAGACGCCATATTGT GTATGTATTCTCGAAGAGTATTAACAACCGATGTAATTAGTCAGTTTTAA AGCAATTTGCATTAACGAACTTTGTATTGCATTAAGTATAGAAGTCGGAA CGGGCCAGATCGGACAACTATATCATATAGCGGGCATAGGAATAATTAAA ACATTAACGCAAAATAAATATGTGTTCGTTGTGTTAGAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 15057714..15059161 | 1687..240 | 7120 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 15059227..15059466 | 240..1 | 1185 | 99.6 | Minus |
chrX | 22417052 | chrX | 15534424..15534540 | 871..987 | 270 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15058918..15060366 | 1688..240 | 7245 | 100 | Minus |
2L | 23513712 | 2L | 15060432..15060671 | 240..1 | 1200 | 100 | Minus |
X | 23542271 | X | 15644544..15644660 | 871..987 | 270 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15058918..15060366 | 1688..240 | 7245 | 100 | Minus |
2L | 23513712 | 2L | 15060432..15060671 | 240..1 | 1200 | 100 | Minus |
X | 23527363 | X | 15652642..15652758 | 871..987 | 270 | 82 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 15059228..15059466 | 1..239 | 99 | Minus | |
chr2L | 15057714..15059161 | 240..1687 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 1..942 | 174..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 1..942 | 174..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 1..942 | 174..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 1..942 | 174..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 1..942 | 174..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 83..1769 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 83..1769 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RB | 87..1773 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RA | 83..1769 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TfIIS-RB | 87..1773 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15058919..15060366 | 240..1687 | 100 | <- | Minus |
2L | 15060433..15060671 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15058919..15060366 | 240..1687 | 100 | <- | Minus |
2L | 15060433..15060671 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15058919..15060366 | 240..1687 | 100 | <- | Minus |
2L | 15060433..15060671 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 15058919..15060366 | 240..1687 | 100 | <- | Minus |
arm_2L | 15060433..15060671 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15058919..15060366 | 240..1687 | 100 | <- | Minus |
2L | 15060433..15060671 | 1..239 | 100 | Minus |
Translation from 173 to 1114
> LD34766.hyp MSVEEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIG MTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNN SSASKSTSAAKSSSSISGKDKSSSSSSSKDKEKKGSTSSSQTSFPSGGMT DAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYK NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLRE KFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF VMCNECGNRWKFC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TfIIS-PB | 313 | CG3710-PB | 1..313 | 1..313 | 1589 | 100 | Plus |
TfIIS-PA | 313 | CG3710-PA | 1..313 | 1..313 | 1589 | 100 | Plus |
CG8117-PA | 162 | CG8117-PA | 1..161 | 149..311 | 576 | 63.8 | Plus |
pps-PA | 2016 | CG6525-PA | 1219..1409 | 95..277 | 157 | 29.5 | Plus |
pps-PB | 2018 | CG6525-PB | 1221..1411 | 95..277 | 157 | 29.5 | Plus |
Translation from 173 to 1114
> LD34766.pep MSVEEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIG MTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNN SSASKSTSAAKSSSSISGKDKSSSSSSSKDKEKKGSTSSSQTSFPSGGMT DAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYK NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLRE KFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF VMCNECGNRWKFC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15561-PA | 315 | GF15561-PA | 1..315 | 1..313 | 1345 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24225-PA | 313 | GG24225-PA | 1..313 | 1..313 | 1608 | 96.8 | Plus |
Dere\GG17893-PA | 162 | GG17893-PA | 1..161 | 149..311 | 599 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10818-PA | 350 | GH10818-PA | 1..350 | 1..313 | 1257 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TfIIS-PB | 313 | CG3710-PB | 1..313 | 1..313 | 1589 | 100 | Plus |
TfIIS-PA | 313 | CG3710-PA | 1..313 | 1..313 | 1589 | 100 | Plus |
CG8117-PA | 162 | CG8117-PA | 1..161 | 149..311 | 576 | 63.8 | Plus |
pps-PA | 2016 | CG6525-PA | 1219..1409 | 95..277 | 157 | 29.5 | Plus |
pps-PB | 2018 | CG6525-PB | 1221..1411 | 95..277 | 157 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17330-PA | 323 | GI17330-PA | 1..323 | 1..313 | 1265 | 83 | Plus |
Dmoj\GI24826-PA | 2080 | GI24826-PA | 1246..1455 | 77..277 | 151 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25727-PA | 313 | GL25727-PA | 1..313 | 1..313 | 1359 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17632-PA | 313 | GA17632-PA | 1..313 | 1..313 | 1359 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14545-PA | 311 | GM14545-PA | 1..311 | 1..313 | 1601 | 97.4 | Plus |
Dsec\GM22558-PA | 162 | GM22558-PA | 1..161 | 149..311 | 585 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21972-PA | 146 | GD21972-PA | 22..146 | 189..313 | 686 | 100 | Plus |
Dsim\GD17224-PA | 141 | GD17224-PA | 1..140 | 170..311 | 511 | 59.9 | Plus |
Dsim\GD21971-PA | 147 | GD21971-PA | 1..96 | 1..96 | 484 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TfIIS-PA | 324 | GJ15975-PA | 1..324 | 1..313 | 1211 | 78.1 | Plus |