BDGP Sequence Production Resources |
Search the DGRC for LD34822
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 348 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | mst-RA |
Protein status: | LD34822.pep: validated not full length |
Preliminary Size: | 1730 |
Sequenced Size: | 1902 |
Gene | Date | Evidence |
---|---|---|
CG1424 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1424 | 2002-05-18 | Blastp of sequenced clone |
mst | 2008-04-29 | Release 5.5 accounting |
mst | 2008-04-29 | Picked prior to 5.5 |
mst | 2008-08-15 | Release 5.9 accounting |
mst | 2008-12-18 | 5.12 accounting |
1902 bp (1902 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118952
> LD34822.complete GACTATACACGTGAAATTTTGACCTTCCAGTTCGGAACGTACGCGAATTA CGTGGGCACACACTTCTGGAACCAGCAGGAGGCCAACTTTAGGTACGGAG ACGAAAGCGAACAGGTGGCCGAGGAGCAGCTGCCCAACAATGATATTTTG TACCGTGAAGGGCGCAACGACCTCAATCGTACCACCTACACGCCCCGCCT GCTGTCCGTGGATTTGTCCGGGACCCTGGGACATCTGCCGGTGACCGGCG AGCTGTACGGCAATTTTGTGCAGCGTGATGAGGAGTTGCTGCCCCTGAGC ACCGGAGAGGAATTGGAACAGGTTCGCAAGCGGGCAGAGGAGAGCGGCGT ATGCTCACCGGAGCAGCTGGAAGTGCAGGAGCAGTCGAAGGCCTCCATTT CCGAATATCAGCGGGATCTGCTCAAGAATGCTGTGGTGCCCGAGAAGAAC TATCAGCTGGCAGCGACGGCAAACAGTTGGGTGGACTTCCTTTACGCCAG GTATCACCCGAGAACCTTGAATGTCTTGCCGGGGCTGATCCGAGATCCGA CTGCCCAAGCCCTGGGTACCTACTCTGCCGGAACAGAAATGTGGCAGGAA GTCTCCTTCAACGAGGAGTTCTGCGATCGTATCCGTTTGTATGTAGAGGA GTGCGATGGCCTGCAGGGCTTCCACGTGCTGTTCGACATTGACGATGGCT TCGGCGGACTGGCTGGGAAGTGCCTGGAGCACCTCAACGATGAGTACAGC CGGGCGAGTTTCGCGCTGCCACTTCACTATCCCAGGATCACTAGTTATCC CCAAGCGGATACCCGCCTGTCGCACAGCATTCGGGTGGTAAACAATGTGT TGGGCTACCACCAACTCAGCGAGCAGGCTTTGATGTTCACGCCGCTATCC ACGCTGGAGACCATCTGGCGAAACAATAATCTGAAGTCGCGCAGTCTGCC GGGACTCCAGTGGGAGACGGATAACCTCTACCAGACATCAGCGCTGCTGG CCGCCTTTTTCGACACGGCCACCTTGAGTTACCGCCTGCGGCAAACGCCA GAATCTTTGCTACGCTTTTGCGAATGCGTCACTCCAGCGGGCAGAAAGAT GACCGCCGCTGGATTGGCTCTGCCATTTGGGCTGAGGGAGGGTCAGGATC TGATAGAGTTTCTAGACCAGAGTGGCGACCACGCGCTGCTCACACAACTC ACACCGGGCTGTGAGCCTGGCACATCCTACGTGGTGCAATCAGTGACGGC TCGTGGCATTCCCGCGGAACGTTTGAAACGGCCCAGGGAGCTGGCCGGCG ATCAACTTCGGATGGCTGCCTATAGCTGCGATAGTATATCCCATATGCTG CAGCTATACTACCAGTGCACCTATCATGGAAGTGTTACAAATGCGGCAGC CACACCACTGCCACTAAAGACACAGCTACCTTTTCCTTATGAAATGTTTG CAGCCGGTATATCACGCGATGGCTACCGCTTGCCTGAGGGGGCGGAACGC GAGACGGGTAGTCGTGTGGATTCGGCACCCATGCTGGCCGCCGTACAGAA CTCCACCAAGCTGGGCGAGCATCTGGACAATGTGCACGCCCAATCGCATC GAGTGCAGCTGGCCAAGTTGCAAGCGTACTCTAATTCTGGATTGGAGCGG GATGAGTACGATACGGCGCTGGATCAGCTGCTTGAGTTCCGCGACCTTTA CGCAGACTCGCAGTATCTATAGGATGCTGTGGTTTTGGAAACTAAGATTT TGTGATAAGCCTAGGATTATGTACACAAAAAACACTCGTATACAGTCGAA TTCAAGATGAATATGTCATTTTATATTGCCTCCGAATTATATTTTCGTTT AGTTCAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21255094..21256144 | 808..1858 | 5255 | 100 | Plus |
chrX | 22417052 | chrX | 21254303..21255035 | 76..808 | 3650 | 99.9 | Plus |
chrX | 22417052 | chrX | 21254173..21254251 | 1..79 | 395 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21254173..21254250 | 1..78 | 100 | -> | Plus |
chrX | 21254306..21255035 | 79..808 | 99 | -> | Plus |
chrX | 21255095..21256141 | 809..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 4..1725 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 4..1725 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 4..1725 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 4..1725 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 4..1725 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 9..1730 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 9..1863 | 1..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 39..1893 | 1..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RA | 9..1730 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mst-RB | 39..1893 | 1..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21389015..21389092 | 1..78 | 100 | -> | Plus |
X | 21389148..21389877 | 79..808 | 100 | -> | Plus |
X | 21389937..21390983 | 809..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21389015..21389092 | 1..78 | 100 | -> | Plus |
X | 21389148..21389877 | 79..808 | 100 | -> | Plus |
X | 21389937..21390983 | 809..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21389015..21389092 | 1..78 | 100 | -> | Plus |
X | 21389148..21389877 | 79..808 | 100 | -> | Plus |
X | 21389937..21390983 | 809..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21260042..21260119 | 1..78 | 100 | -> | Plus |
arm_X | 21260175..21260904 | 79..808 | 100 | -> | Plus |
arm_X | 21260964..21262010 | 809..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21374240..21374969 | 79..808 | 100 | -> | Plus |
X | 21375029..21376075 | 809..1855 | 100 | Plus | |
X | 21374107..21374184 | 1..78 | 100 | -> | Plus |
Translation from 0 to 1721
> LD34822.pep DYTREILTFQFGTYANYVGTHFWNQQEANFRYGDESEQVAEEQLPNNDIL YREGRNDLNRTTYTPRLLSVDLSGTLGHLPVTGELYGNFVQRDEELLPLS TGEELEQVRKRAEESGVCSPEQLEVQEQSKASISEYQRDLLKNAVVPEKN YQLAATANSWVDFLYARYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQE VSFNEEFCDRIRLYVEECDGLQGFHVLFDIDDGFGGLAGKCLEHLNDEYS RASFALPLHYPRITSYPQADTRLSHSIRVVNNVLGYHQLSEQALMFTPLS TLETIWRNNNLKSRSLPGLQWETDNLYQTSALLAAFFDTATLSYRLRQTP ESLLRFCECVTPAGRKMTAAGLALPFGLREGQDLIEFLDQSGDHALLTQL TPGCEPGTSYVVQSVTARGIPAERLKRPRELAGDQLRMAAYSCDSISHML QLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAER ETGSRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLER DEYDTALDQLLEFRDLYADSQYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20926-PA | 576 | GF20926-PA | 3..576 | 2..573 | 2440 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19729-PA | 574 | GG19729-PA | 2..574 | 1..573 | 2869 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24680-PA | 570 | GH24680-PA | 2..570 | 1..573 | 2005 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mst-PB | 574 | CG1424-PB | 2..574 | 1..573 | 3000 | 100 | Plus |
mst-PA | 574 | CG1424-PA | 2..574 | 1..573 | 3000 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21660-PA | 570 | GI21660-PA | 4..570 | 3..573 | 2053 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16019-PA | 555 | GL16019-PA | 2..555 | 1..573 | 2027 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12852-PA | 574 | GA12852-PA | 2..574 | 1..573 | 2283 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23085-PA | 540 | GM23085-PA | 4..540 | 37..573 | 2727 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17537-PA | 574 | GD17537-PA | 2..574 | 1..573 | 2940 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16019-PA | 572 | GJ16019-PA | 2..572 | 1..573 | 2179 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25434-PA | 572 | GK25434-PA | 2..572 | 1..573 | 2137 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17927-PA | 574 | GE17927-PA | 2..574 | 1..573 | 2865 | 92.8 | Plus |
Translation from 0 to 1721
> LD34822.hyp DYTREILTFQFGTYANYVGTHFWNQQEANFRYGDESEQVAEEQLPNNDIL YREGRNDLNRTTYTPRLLSVDLSGTLGHLPVTGELYGNFVQRDEELLPLS TGEELEQVRKRAEESGVCSPEQLEVQEQSKASISEYQRDLLKNAVVPEKN YQLAATANSWVDFLYARYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQE VSFNEEFCDRIRLYVEECDGLQGFHVLFDIDDGFGGLAGKCLEHLNDEYS RASFALPLHYPRITSYPQADTRLSHSIRVVNNVLGYHQLSEQALMFTPLS TLETIWRNNNLKSRSLPGLQWETDNLYQTSALLAAFFDTATLSYRLRQTP ESLLRFCECVTPAGRKMTAAGLALPFGLREGQDLIEFLDQSGDHALLTQL TPGCEPGTSYVVQSVTARGIPAERLKRPRELAGDQLRMAAYSCDSISHML QLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAER ETGSRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLER DEYDTALDQLLEFRDLYADSQYL*