BDGP Sequence Production Resources |
Search the DGRC for LD35003
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 350 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | mdlc-RA |
Protein status: | LD35003.pep: gold |
Preliminary Size: | 1501 |
Sequenced Size: | 1403 |
Gene | Date | Evidence |
---|---|---|
CG4973 | 2001-01-01 | Release 2 assignment |
CG4973 | 2001-07-04 | Blastp of sequenced clone |
CG4973 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4973 | 2008-04-29 | Release 5.5 accounting |
CG4973 | 2008-08-15 | Release 5.9 accounting |
CG4973 | 2008-12-18 | 5.12 accounting |
1403 bp (1403 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051847
> LD35003.complete CGAAATTGCTATTGTTAATTGTTGTTAACGTGAATTACTAGATAAGTACA TAAATTTAAAAGCCGGAGAATGTCGGAAGAAGCGGCTAGCACCTCGTCCT TTGGCTTCAAGAAGCGGAACCTCAAGAAGGGAGCTGGAATTCGTCGCAAA AAGGAAACCAGCAGTGATGAATCTGCAAAAAGCAGCGATGAAGAGACCAA AGGCAAAGCCAGTGCTCTGGTGCGAGCCGAGAACCGCCGAAAGCGCACGA ATCCCAACTTCCAGAGCACCAAGACAATGAGCAAAGCAAAGAGACAGGCG GGAGGAGTTGGTGATGATGGCTCATCCTCAGCCTCCGACGATGATAAACT GGGCATTGCGTACAAATCCAAACGCGAGGCGCTGCCCAGTGGACCCCAAG ATCAGGGAGCTACATCGATTAACGAAATGGACACAGAATTGGATCGCGAT GCGCAGGCAATTCATGCGCGAGCTCTGAAAATCAACGAAGAGCTGGAGGG CAAGGCGGACGATAAGATCTATCGCGGAATTAACAACTATGCGCAGTACT ACAAGAAGCAGGATACAGCGGCAGGGAATGCCAGCTCCGGAATGGTACGA AGTGGCCCAATTAGGGCTCCTGCCCATCTTAGGGCCACTGTCAGGTGGGA TTATCAGCCGGATATATGCAAGGATTACAAGGAAACAGGATATTGCGGCT TTGGCGACAGCTGTAAGTTTCTGCACGATCGCAGTGATTACAAAGCGGGC TGGCAATTGGAAATGGATCACGAAAATCAGCGAACGGGTGATGTAGACTC CGATGGCGATGATACCAAGTATGAGATTCACTCCGATGAAGAAACACTGC CTTTCAAGTGCCACATCTGCCGACAGAGTTTTGTCAATCCCGTGGTAACA AAGTGCAAGCACTATTTCTGTGAAAAGTGCGCCTTGGCCCAGTACAAAAA GTCACAGCGCTGCATCATCTGTTCCCAGCAAACAAATGGTATTTTCAATC CCGCCAAAGAGCTGATAGCTCGCCTCAAGACAAACCCAATGGAAAACTCA GATAGTGATGAGGAGGAGGAATTTGGGAAAAAGGAGGATAAAGCGGAAGC AGGGGAGGAAGCTCAGGAGATTTCTTCGGATGATAGTGATTAAAATATTT TTTTAAATCATTTATACAGGTTGTGAAAGTAAATAGGGACATTGATTAGA TGCTTCACATAAAATCCATTTTACAGCACATTTGCCGCATAAGTGTAGAA AGTAAAGTAAGGATTGTACCACCGATAGGTGGCGTGTAAGAAATTGTAAA ACCCTTTGCCCCAAAGAGAATTGCTGATAAATCACTATTCTTACTTGTAA CTAGAAAAATATATTTTGATAAGTTTTCAACCAAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4973-RA | 1441 | CG4973-RA | 41..1428 | 1..1388 | 6925 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15881961..15882690 | 175..904 | 3620 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 15882756..15883233 | 903..1382 | 2290 | 99 | Plus |
chr3R | 27901430 | chr3R | 15881729..15881903 | 1..175 | 875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 20058017..20058746 | 175..904 | 3650 | 100 | Plus |
3R | 32079331 | 3R | 20058812..20059297 | 903..1388 | 2415 | 99.8 | Plus |
3R | 32079331 | 3R | 20057785..20057959 | 1..175 | 875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19798848..19799577 | 175..904 | 3650 | 100 | Plus |
3R | 31820162 | 3R | 19799643..19800128 | 903..1388 | 2415 | 99.7 | Plus |
3R | 31820162 | 3R | 19798616..19798790 | 1..175 | 875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15881729..15881903 | 1..175 | 100 | -> | Plus |
chr3R | 15881962..15882688 | 176..902 | 99 | -> | Plus |
chr3R | 15882756..15883233 | 903..1382 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 1..1074 | 70..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 1..1074 | 70..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 1..1074 | 70..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 1..1074 | 70..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdlc-RA | 1..1074 | 70..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 36..1417 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 36..1417 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 38..1419 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4973-RA | 36..1417 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdlc-RA | 38..1419 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20057785..20057959 | 1..175 | 100 | -> | Plus |
3R | 20058018..20058744 | 176..902 | 100 | -> | Plus |
3R | 20058812..20059291 | 903..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20057785..20057959 | 1..175 | 100 | -> | Plus |
3R | 20058018..20058744 | 176..902 | 100 | -> | Plus |
3R | 20058812..20059291 | 903..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20057785..20057959 | 1..175 | 100 | -> | Plus |
3R | 20058018..20058744 | 176..902 | 100 | -> | Plus |
3R | 20058812..20059291 | 903..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15883507..15883681 | 1..175 | 100 | -> | Plus |
arm_3R | 15883740..15884466 | 176..902 | 100 | -> | Plus |
arm_3R | 15884534..15885013 | 903..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19798616..19798790 | 1..175 | 100 | -> | Plus |
3R | 19798849..19799575 | 176..902 | 100 | -> | Plus |
3R | 19799643..19800122 | 903..1382 | 100 | Plus |
Translation from 69 to 1142
> LD35003.hyp MSEEAASTSSFGFKKRNLKKGAGIRRKKETSSDESAKSSDEETKGKASAL VRAENRRKRTNPNFQSTKTMSKAKRQAGGVGDDGSSSASDDDKLGIAYKS KREALPSGPQDQGATSINEMDTELDRDAQAIHARALKINEELEGKADDKI YRGINNYAQYYKKQDTAAGNASSGMVRSGPIRAPAHLRATVRWDYQPDIC KDYKETGYCGFGDSCKFLHDRSDYKAGWQLEMDHENQRTGDVDSDGDDTK YEIHSDEETLPFKCHICRQSFVNPVVTKCKHYFCEKCALAQYKKSQRCII CSQQTNGIFNPAKELIARLKTNPMENSDSDEEEEFGKKEDKAEAGEEAQE ISSDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdlc-PA | 357 | CG4973-PA | 1..357 | 1..357 | 1880 | 100 | Plus |
Translation from 69 to 1142
> LD35003.pep MSEEAASTSSFGFKKRNLKKGAGIRRKKETSSDESAKSSDEETKGKASAL VRAENRRKRTNPNFQSTKTMSKAKRQAGGVGDDGSSSASDDDKLGIAYKS KREALPSGPQDQGATSINEMDTELDRDAQAIHARALKINEELEGKADDKI YRGINNYAQYYKKQDTAAGNASSGMVRSGPIRAPAHLRATVRWDYQPDIC KDYKETGYCGFGDSCKFLHDRSDYKAGWQLEMDHENQRTGDVDSDGDDTK YEIHSDEETLPFKCHICRQSFVNPVVTKCKHYFCEKCALAQYKKSQRCII CSQQTNGIFNPAKELIARLKTNPMENSDSDEEEEFGKKEDKAEAGEEAQE ISSDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17636-PA | 353 | GF17636-PA | 1..353 | 1..357 | 1526 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23724-PA | 356 | GG23724-PA | 1..356 | 1..357 | 1704 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22886-PA | 364 | GH22886-PA | 1..360 | 1..354 | 1480 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdlc-PA | 357 | CG4973-PA | 1..357 | 1..357 | 1880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22714-PA | 360 | GI22714-PA | 1..329 | 1..324 | 1449 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12088-PA | 358 | GL12088-PA | 1..358 | 1..357 | 1557 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18564-PA | 358 | GA18564-PA | 1..358 | 1..357 | 1559 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17684-PA | 356 | GM17684-PA | 1..356 | 1..357 | 1830 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19337-PA | 356 | GD19337-PA | 1..356 | 1..357 | 1851 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23438-PA | 366 | GJ23438-PA | 1..331 | 1..325 | 1502 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22373-PA | 357 | GK22373-PA | 1..357 | 1..357 | 1396 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25648-PA | 356 | GE25648-PA | 1..356 | 1..357 | 1644 | 93.8 | Plus |