Clone LD35238 Report

Search the DGRC for LD35238

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:352
Well:38
Vector:pOT2
Associated Gene/Transcriptcbs-RA
Protein status:LD35238.pep: gold
Preliminary Size:2472
Sequenced Size:2206

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4840 2001-01-01 Release 2 assignment
CG4840 2001-07-04 Blastp of sequenced clone
CG4840 2003-01-01 Sim4 clustering to Release 3
cbs 2008-04-29 Release 5.5 accounting
cbs 2008-08-15 Release 5.9 accounting
cbs 2008-12-18 5.12 accounting

Clone Sequence Records

LD35238.complete Sequence

2206 bp (2206 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051853

> LD35238.complete
AACACTACGGCCACCAGATATAACGCCATGCTATAAACGCTCTGTGGGCA
CGTTTTCGTCAGCCCCAGCCACAAGCAGGCCAACTTCAGTCGGGGGCAGT
ACACATACAGAAAATAGAGCAGCGCAACAGAGAAAAAGCTCCCCCCTCGA
AAAACCTAACAATGTTTGCTACACTGAAAAACAAGATCAAGGAGGAAACT
GGCGATGATGTGGTCCAATCAGCCAATCAACGTTATCCCGGCAACAACAA
CAACAATTACCGGCTACGTAGTCGCCGCGTTAGCATTAATTCCAACTCAG
CTGATGATGTGGGCGGTGGCGGATTCTACAATGAGTCGGAGCAATTGTGC
GAGCTGCGAAGTCAGTGCAACGAGCTCACCACGAAGCTGTCCACCGTCAC
GCAGGGATTGCAGCAGCTGCAGGAGGAGAAGACGCGCGTGGACAAGACCA
ACGAGATTCTGCTAGAGAGTGTGCGTGTGGCCCAGACGCAGAAGGACATA
TACTGCGAGGAGCAGGAGAAGATTCAGAATCTACAGCAAATCGAGATTGA
CAAGCTGAAGAATCTGCTTAGCTTTCGGGAGCAGGAGTCGGTGGATCGCA
TGGGTCTCATGCGCCAGCAGACCCAGCAAATCGAGTCCTTGAGCGAGGAA
CTAGAACGTCTGCGTCCCATTGAATCCGTGGCCGAAGATTTACGCGACGA
ACTAGAGCAACTGCGACATTCTACACAGCAGGAGAAGAATCTGCTGACCA
CAACACTGGCGGCTGTACAGGAGGAGAACCGGCACCTCAAAAAGCGCATG
AAAATCGTCGAGGAGTCGCGACTCGAGTCTCTGGGCAAACTGAACTCCGA
GCAACAAGTGCAAGCCCTTATCCGGGAACATAAACTGCTGGAACAGCACT
TAGAGGAGGCCCATCTGCAGTTGTCGGACATCAAAGGCTCGTGGAGTGGC
CAGAATCTGGCGCTGGAAACCCAAGTTAGTCGTCTATCCAAGCAAGTGGC
CGAAGAGACCACCGAAAAGCGAAAGGCCCTTAAATCCCGCGACGATGCCA
TTGAAAGCCGCAAGCAGGTATCATTCGAACTCGAAAAAGCCAAAGATGAA
ATAAAGCAGCGGGACGATAAGGTCAAGCTGCTGGAGGAGGAAATCGATGA
ACTTAGTGTGGCCCTGAAAGAGTGCCGAGAGGAGAACGAGCAGCAAGTCC
TCTTTGAGCGCAATAAATCTCAAAATTTGGAAACAGAGGTAAAAGATCTC
AAGACTCGTCTCACGGCAGCGGATGACAGGTTCAGCGAGTACTCCTCGAA
TGCCGAGCAGGTGGCCCAAAAGCTACGGGTTCAGGTGACTGAAAAGCAGG
AGCAGCTGGACGAAACCATAATGCAACTGGAAATCGAACGAGAGGAGAAA
ATGACTGCAATACTTCGCAATGCGGAAATCGCCCAGAGCGAAGACATTTT
ACGGCAACAGCTGCGCTTGGAGCGCAGCGAAGCCAGCGACCTCCAGGAGA
GGAATAATCAGCTGGTGAGGGATATATCCGAGGCACGGCAAACGTTGCAG
CAGGTCAGCAGCACAGCACAGGATAATGCCGACAAGTTGACCGAATTCGA
GCGAGTTCAGTTGGAAATAATCGAAAAGAATAAGACAATAAAAACACTGA
ATCAGCGTTTGATTGACTTGAAAAAAACAGTGCAGAAGGAACTACGCAGT
GCGCAGATATCCACGGACAGTGAATCTCATCCGACAACGACACCAGGTCA
CAGAATCTCAAGTTCATCGCTGGAGGCATTTTCAACTGGCGACAAGGGAA
ATTGCGTCATAATGGACGAAGTTAATTTTCAATATTTGAAACACGTAATT
GTTAAGTTCTTGACCAGTCGCGAGGTGGAAGCTCGCCATCTTGTTCGTGC
CGTATCCACATTACTTCAATTGACAACCGAGGAGGAAAAGCTGCTACACG
ACACATTGAATTGGAAGATGAGTTGGTTTGGCATGAAACCAACTTAAGTA
GCCACAGCAATACATCACATTTGTACTCTAATCTATAGTCAATTCATAAC
GTTCGTGTAATATGTACATACCAATTGCATACGCAGCACTGTGTTATTTT
GTTTACCAACAACATTCCATTTTGTTGAATAGTATTTATTTCTACCGTTG
TGATTTTTATAATAAACTAACATTTATGTAAAAAAAAAAAAAAAAAAAAA
AAAAAA

LD35238.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
cbs-RA 2366 cbs-RA 162..2344 1..2183 10915 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9338381..9339170 334..1123 3890 99.5 Plus
chr2R 21145070 chr2R 9339615..9340028 1221..1634 2025 99.3 Plus
chr2R 21145070 chr2R 9337957..9338291 1..335 1615 98.8 Plus
chr2R 21145070 chr2R 9340380..9340686 1873..2179 1535 100 Plus
chr2R 21145070 chr2R 9340082..9340325 1633..1876 1220 100 Plus
chr2R 21145070 chr2R 9339219..9339319 1120..1220 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:29:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13451088..13451877 334..1123 3950 100 Plus
2R 25286936 2R 13452322..13452735 1221..1634 2070 100 Plus
2R 25286936 2R 13450664..13450998 1..335 1675 100 Plus
2R 25286936 2R 13453087..13453397 1873..2183 1555 100 Plus
2R 25286936 2R 13452789..13453032 1633..1876 1220 100 Plus
2R 25286936 2R 13451926..13452026 1120..1220 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13452287..13453076 334..1123 3950 100 Plus
2R 25260384 2R 13453521..13453934 1221..1634 2070 100 Plus
2R 25260384 2R 13451863..13452197 1..335 1675 100 Plus
2R 25260384 2R 13454286..13454596 1873..2183 1555 100 Plus
2R 25260384 2R 13453988..13454231 1633..1876 1220 100 Plus
2R 25260384 2R 13453125..13453225 1120..1220 505 100 Plus
Blast to na_te.dros performed 2019-03-15 13:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 4723..4793 87..18 118 64.8 Minus

LD35238.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:45:17 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9337957..9338291 1..335 98 -> Plus
chr2R 9338383..9339168 336..1121 99 -> Plus
chr2R 9339221..9339319 1122..1220 100 -> Plus
chr2R 9339615..9340028 1221..1634 99 -> Plus
chr2R 9340084..9340323 1635..1874 100 -> Plus
chr2R 9340382..9340686 1875..2179 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:17:22 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..1836 162..1997 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:18:15 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..1836 162..1997 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:01 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..1836 162..1997 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:49:49 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..1836 162..1997 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:39:37 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..1836 162..1997 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:13:24 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..2179 1..2179 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:18:15 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..2179 1..2179 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:01 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 79..2257 1..2179 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:49:49 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 1..2179 1..2179 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:39:37 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
cbs-RA 79..2257 1..2179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:17 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13450664..13450998 1..335 100 -> Plus
2R 13451090..13451875 336..1121 100 -> Plus
2R 13451928..13452026 1122..1220 100 -> Plus
2R 13452322..13452735 1221..1634 100 -> Plus
2R 13452791..13453030 1635..1874 100 -> Plus
2R 13453089..13453393 1875..2179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:17 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13450664..13450998 1..335 100 -> Plus
2R 13451090..13451875 336..1121 100 -> Plus
2R 13451928..13452026 1122..1220 100 -> Plus
2R 13452322..13452735 1221..1634 100 -> Plus
2R 13452791..13453030 1635..1874 100 -> Plus
2R 13453089..13453393 1875..2179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:17 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13450664..13450998 1..335 100 -> Plus
2R 13451090..13451875 336..1121 100 -> Plus
2R 13451928..13452026 1122..1220 100 -> Plus
2R 13452322..13452735 1221..1634 100 -> Plus
2R 13452791..13453030 1635..1874 100 -> Plus
2R 13453089..13453393 1875..2179 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:01 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9338169..9338503 1..335 100 -> Plus
arm_2R 9338595..9339380 336..1121 100 -> Plus
arm_2R 9339433..9339531 1122..1220 100 -> Plus
arm_2R 9339827..9340240 1221..1634 100 -> Plus
arm_2R 9340296..9340535 1635..1874 100 -> Plus
arm_2R 9340594..9340898 1875..2179 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:28:02 Download gff for LD35238.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13454288..13454592 1875..2179 100   Plus
2R 13453521..13453934 1221..1634 100 -> Plus
2R 13453990..13454229 1635..1874 100 -> Plus
2R 13451863..13452197 1..335 100 -> Plus
2R 13452289..13453074 336..1121 100 -> Plus
2R 13453127..13453225 1122..1220 100 -> Plus

LD35238.pep Sequence

Translation from 161 to 1996

> LD35238.pep
MFATLKNKIKEETGDDVVQSANQRYPGNNNNNYRLRSRRVSINSNSADDV
GGGGFYNESEQLCELRSQCNELTTKLSTVTQGLQQLQEEKTRVDKTNEIL
LESVRVAQTQKDIYCEEQEKIQNLQQIEIDKLKNLLSFREQESVDRMGLM
RQQTQQIESLSEELERLRPIESVAEDLRDELEQLRHSTQQEKNLLTTTLA
AVQEENRHLKKRMKIVEESRLESLGKLNSEQQVQALIREHKLLEQHLEEA
HLQLSDIKGSWSGQNLALETQVSRLSKQVAEETTEKRKALKSRDDAIESR
KQVSFELEKAKDEIKQRDDKVKLLEEEIDELSVALKECREENEQQVLFER
NKSQNLETEVKDLKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQLD
ETIMQLEIEREEKMTAILRNAEIAQSEDILRQQLRLERSEASDLQERNNQ
LVRDISEARQTLQQVSSTAQDNADKLTEFERVQLEIIEKNKTIKTLNQRL
IDLKKTVQKELRSAQISTDSESHPTTTPGHRISSSSLEAFSTGDKGNCVI
MDEVNFQYLKHVIVKFLTSREVEARHLVRAVSTLLQLTTEEEKLLHDTLN
WKMSWFGMKPT*

LD35238.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13694-PA 617 GF13694-PA 1..617 1..611 2730 86.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20382-PA 611 GG20382-PA 1..611 1..611 3092 97.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22681-PA 618 GH22681-PA 1..618 1..611 2219 71.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:47
Subject Length Description Subject Range Query Range Score Percent Strand
cbs-PA 611 CG4840-PA 1..611 1..611 3018 100 Plus
cbs-PB 603 CG4840-PB 1..603 1..611 2961 98.7 Plus
cbs-PC 601 CG4840-PC 1..601 1..611 2951 98.4 Plus
GCC185-PB 1135 CG3532-PB 411..909 55..539 227 21.2 Plus
Root-PF 2048 CG6129-PF 810..1304 53..511 225 21.2 Plus
Root-PE 2048 CG6129-PE 810..1304 53..511 225 21.2 Plus
Root-PD 2048 CG6129-PD 810..1304 53..511 225 21.2 Plus
Mhc-PU 1949 CG17927-PU 973..1432 68..519 219 23 Plus
Mhc-PN 1949 CG17927-PN 973..1432 68..519 219 23 Plus
Mhc-PE 1962 CG17927-PE 973..1432 68..519 219 23 Plus
Mhc-PH 1962 CG17927-PH 973..1432 68..519 219 23 Plus
Mhc-PT 1962 CG17927-PT 973..1432 68..519 219 23 Plus
Mhc-PO 1962 CG17927-PO 973..1432 68..519 219 23 Plus
Mhc-PF 1962 CG17927-PF 973..1432 68..519 219 23 Plus
Mhc-PQ 1962 CG17927-PQ 973..1432 68..519 219 23 Plus
Mhc-PI 1962 CG17927-PI 973..1432 68..519 219 23 Plus
Mhc-PG 1962 CG17927-PG 973..1432 68..519 219 23 Plus
Mhc-PA 1962 CG17927-PA 973..1432 68..519 219 23 Plus
Mhc-PD 1962 CG17927-PD 973..1432 68..519 219 23 Plus
Mhc-PC 1962 CG17927-PC 973..1432 68..519 219 23 Plus
Mhc-PR 1962 CG17927-PR 973..1432 68..519 219 23 Plus
Mhc-PL 1936 CG17927-PL 973..1432 68..519 215 23.6 Plus
Mhc-PM 1936 CG17927-PM 973..1432 68..519 215 23.6 Plus
Mhc-PK 1936 CG17927-PK 973..1432 68..519 215 23.6 Plus
Mhc-PP 1949 CG17927-PP 973..1432 68..519 215 23.6 Plus
Mhc-PV 1962 CG17927-PV 973..1432 68..519 215 23.6 Plus
Mhc-PS 1962 CG17927-PS 973..1432 68..519 215 23.6 Plus
Mhc-PB 1962 CG17927-PB 973..1432 68..519 215 23.6 Plus
Gmap-PC 1208 CG33206-PC 608..1065 59..591 210 21.9 Plus
Gmap-PB 1208 CG33206-PB 608..1065 59..591 210 21.9 Plus
Gmap-PA 1398 CG33206-PA 798..1255 59..591 210 21.9 Plus
zip-PH 1964 CG15792-PH 953..1445 64..521 209 21.8 Plus
zip-PG 1971 CG15792-PG 945..1437 64..521 209 21.8 Plus
zip-PE 1971 CG15792-PE 945..1437 64..521 209 21.8 Plus
zip-PC 1971 CG15792-PC 945..1437 64..521 209 21.8 Plus
zip-PF 1979 CG15792-PF 953..1445 64..521 209 21.8 Plus
zip-PB 2011 CG15792-PB 985..1477 64..521 209 21.8 Plus
zip-PD 2016 CG15792-PD 990..1482 64..521 209 21.8 Plus
zip-PI 2024 CG15792-PI 998..1490 64..521 209 21.8 Plus
zip-PA 2056 CG15792-PA 1030..1522 64..521 209 21.8 Plus
Golgin245-PA 1489 CG3493-PA 259..814 58..594 206 21.4 Plus
asl-PA 994 CG2919-PA 325..770 60..512 203 23 Plus
Golgin245-PA 1489 CG3493-PA 729..1172 57..515 202 23.5 Plus
brp-PI 1397 CG42344-PI 65..536 64..510 202 23.8 Plus
brp-PK 1707 CG42344-PK 386..846 64..510 201 24.7 Plus
lva-PD 2779 CG6450-PD 1093..1578 66..523 201 21.4 Plus
lva-PC 2779 CG6450-PC 1093..1578 66..523 201 21.4 Plus
CLIP-190-PN 1598 CG5020-PN 702..1208 64..517 200 20.5 Plus
CLIP-190-PR 1601 CG5020-PR 705..1211 64..517 200 20.5 Plus
CLIP-190-PP 1623 CG5020-PP 727..1233 64..517 200 20.5 Plus
CLIP-190-PC 1652 CG5020-PC 756..1262 64..517 200 20.5 Plus
CLIP-190-PS 1653 CG5020-PS 757..1263 64..517 200 20.5 Plus
CLIP-190-PN 1598 CG5020-PN 434..923 59..541 199 19.6 Plus
CLIP-190-PR 1601 CG5020-PR 437..926 59..541 199 19.6 Plus
CLIP-190-PP 1623 CG5020-PP 459..948 59..541 199 19.6 Plus
CLIP-190-PC 1652 CG5020-PC 488..977 59..541 199 19.6 Plus
CLIP-190-PS 1653 CG5020-PS 489..978 59..541 199 19.6 Plus
Golgin245-PA 1489 CG3493-PA 893..1473 60..594 197 19.7 Plus
asl-PA 994 CG2919-PA 456..931 57..523 197 21 Plus
CLIP-190-PN 1598 CG5020-PN 859..1370 59..516 191 18.1 Plus
CLIP-190-PR 1601 CG5020-PR 862..1373 59..516 191 18.1 Plus
CLIP-190-PP 1623 CG5020-PP 884..1395 59..516 191 18.1 Plus
CLIP-190-PC 1652 CG5020-PC 913..1424 59..516 191 18.1 Plus
CLIP-190-PS 1653 CG5020-PS 914..1425 59..516 191 18.1 Plus
Mhc-PU 1949 CG17927-PU 1226..1662 61..513 187 23.1 Plus
Mhc-PN 1949 CG17927-PN 1226..1662 61..513 187 23.1 Plus
Mhc-PE 1962 CG17927-PE 1226..1662 61..513 187 23.1 Plus
Mhc-PH 1962 CG17927-PH 1226..1662 61..513 187 23.1 Plus
Mhc-PT 1962 CG17927-PT 1226..1662 61..513 187 23.1 Plus
Mhc-PO 1962 CG17927-PO 1226..1662 61..513 187 23.1 Plus
Mhc-PF 1962 CG17927-PF 1226..1662 61..513 187 23.1 Plus
Mhc-PQ 1962 CG17927-PQ 1226..1662 61..513 187 23.1 Plus
Mhc-PI 1962 CG17927-PI 1226..1662 61..513 187 23.1 Plus
Mhc-PG 1962 CG17927-PG 1226..1662 61..513 187 23.1 Plus
Mhc-PA 1962 CG17927-PA 1226..1662 61..513 187 23.1 Plus
Mhc-PD 1962 CG17927-PD 1226..1662 61..513 187 23.1 Plus
Mhc-PC 1962 CG17927-PC 1226..1662 61..513 187 23.1 Plus
Mhc-PR 1962 CG17927-PR 1226..1662 61..513 187 23.1 Plus
asl-PA 994 CG2919-PA 149..702 57..597 186 19.6 Plus
Mhc-PL 1936 CG17927-PL 1250..1662 64..513 184 22.9 Plus
Mhc-PM 1936 CG17927-PM 1250..1662 64..513 184 22.9 Plus
Mhc-PK 1936 CG17927-PK 1250..1662 64..513 184 22.9 Plus
Mhc-PP 1949 CG17927-PP 1250..1662 64..513 184 22.9 Plus
Mhc-PV 1962 CG17927-PV 1250..1662 64..513 184 22.9 Plus
Mhc-PS 1962 CG17927-PS 1250..1662 64..513 184 22.9 Plus
Mhc-PB 1962 CG17927-PB 1250..1662 64..513 184 22.9 Plus
CLIP-190-PN 1598 CG5020-PN 1111..1498 58..451 179 20.6 Plus
CLIP-190-PR 1601 CG5020-PR 1114..1501 58..451 179 20.6 Plus
CLIP-190-PP 1623 CG5020-PP 1136..1523 58..451 179 20.6 Plus
CLIP-190-PC 1652 CG5020-PC 1165..1552 58..451 179 20.6 Plus
CLIP-190-PS 1653 CG5020-PS 1166..1553 58..451 179 20.6 Plus
Root-PF 2048 CG6129-PF 599..1013 55..478 178 19.7 Plus
Root-PE 2048 CG6129-PE 599..1013 55..478 178 19.7 Plus
Root-PD 2048 CG6129-PD 599..1013 55..478 178 19.7 Plus
Gmap-PC 1208 CG33206-PC 229..690 61..522 178 19.6 Plus
Gmap-PB 1208 CG33206-PB 229..690 61..522 178 19.6 Plus
Gmap-PA 1398 CG33206-PA 419..880 61..522 178 19.6 Plus
Mhc-PU 1949 CG17927-PU 1484..1910 111..519 177 21.6 Plus
Mhc-PN 1949 CG17927-PN 1484..1910 111..519 177 21.6 Plus
Mhc-PE 1962 CG17927-PE 1484..1910 111..519 177 21.6 Plus
Mhc-PH 1962 CG17927-PH 1484..1910 111..519 177 21.6 Plus
Mhc-PT 1962 CG17927-PT 1484..1910 111..519 177 21.6 Plus
Mhc-PO 1962 CG17927-PO 1484..1910 111..519 177 21.6 Plus
Mhc-PF 1962 CG17927-PF 1484..1910 111..519 177 21.6 Plus
Mhc-PQ 1962 CG17927-PQ 1484..1910 111..519 177 21.6 Plus
Mhc-PI 1962 CG17927-PI 1484..1910 111..519 177 21.6 Plus
Mhc-PG 1962 CG17927-PG 1484..1910 111..519 177 21.6 Plus
Mhc-PA 1962 CG17927-PA 1484..1910 111..519 177 21.6 Plus
Mhc-PD 1962 CG17927-PD 1484..1910 111..519 177 21.6 Plus
Mhc-PC 1962 CG17927-PC 1484..1910 111..519 177 21.6 Plus
Mhc-PR 1962 CG17927-PR 1484..1910 111..519 177 21.6 Plus
Mhc-PL 1936 CG17927-PL 1484..1910 111..519 177 21.6 Plus
Mhc-PM 1936 CG17927-PM 1484..1910 111..519 177 21.6 Plus
Mhc-PK 1936 CG17927-PK 1484..1910 111..519 177 21.6 Plus
Mhc-PP 1949 CG17927-PP 1484..1910 111..519 177 21.6 Plus
Mhc-PV 1962 CG17927-PV 1484..1910 111..519 177 21.6 Plus
Mhc-PS 1962 CG17927-PS 1484..1910 111..519 177 21.6 Plus
Mhc-PB 1962 CG17927-PB 1484..1910 111..519 177 21.6 Plus
zip-PH 1964 CG15792-PH 1495..1902 59..510 177 20.1 Plus
zip-PG 1971 CG15792-PG 1487..1894 59..510 177 20.1 Plus
zip-PE 1971 CG15792-PE 1487..1894 59..510 177 20.1 Plus
zip-PC 1971 CG15792-PC 1487..1894 59..510 177 20.1 Plus
zip-PF 1979 CG15792-PF 1495..1902 59..510 177 20.1 Plus
zip-PB 2011 CG15792-PB 1527..1934 59..510 177 20.1 Plus
zip-PD 2016 CG15792-PD 1532..1939 59..510 177 20.1 Plus
zip-PI 2024 CG15792-PI 1540..1947 59..510 177 20.1 Plus
zip-PA 2056 CG15792-PA 1572..1979 59..510 177 20.1 Plus
lva-PD 2779 CG6450-PD 1224..1731 60..523 177 19.4 Plus
lva-PC 2779 CG6450-PC 1224..1731 60..523 177 19.4 Plus
zip-PH 1964 CG15792-PH 813..1338 118..603 176 20.2 Plus
zip-PG 1971 CG15792-PG 805..1330 118..603 176 20.2 Plus
zip-PE 1971 CG15792-PE 805..1330 118..603 176 20.2 Plus
zip-PC 1971 CG15792-PC 805..1330 118..603 176 20.2 Plus
zip-PF 1979 CG15792-PF 813..1338 118..603 176 20.2 Plus
zip-PB 2011 CG15792-PB 845..1370 118..603 176 20.2 Plus
zip-PD 2016 CG15792-PD 850..1375 118..603 176 20.2 Plus
zip-PI 2024 CG15792-PI 858..1383 118..603 176 20.2 Plus
zip-PA 2056 CG15792-PA 890..1415 118..603 176 20.2 Plus
Mhc-PL 1936 CG17927-PL 847..1235 156..519 174 20.1 Plus
Mhc-PM 1936 CG17927-PM 847..1235 156..519 174 20.1 Plus
Mhc-PK 1936 CG17927-PK 847..1235 156..519 174 20.1 Plus
Mhc-PP 1949 CG17927-PP 847..1235 156..519 174 20.1 Plus
Mhc-PV 1962 CG17927-PV 847..1235 156..519 174 20.1 Plus
Mhc-PS 1962 CG17927-PS 847..1235 156..519 174 20.1 Plus
Mhc-PB 1962 CG17927-PB 847..1235 156..519 174 20.1 Plus
Mhc-PU 1949 CG17927-PU 847..1181 156..466 169 20.9 Plus
Mhc-PN 1949 CG17927-PN 847..1181 156..466 169 20.9 Plus
Mhc-PE 1962 CG17927-PE 847..1181 156..466 169 20.9 Plus
Mhc-PH 1962 CG17927-PH 847..1181 156..466 169 20.9 Plus
Mhc-PT 1962 CG17927-PT 847..1181 156..466 169 20.9 Plus
Mhc-PO 1962 CG17927-PO 847..1181 156..466 169 20.9 Plus
Mhc-PF 1962 CG17927-PF 847..1181 156..466 169 20.9 Plus
Mhc-PQ 1962 CG17927-PQ 847..1181 156..466 169 20.9 Plus
Mhc-PI 1962 CG17927-PI 847..1181 156..466 169 20.9 Plus
Mhc-PG 1962 CG17927-PG 847..1181 156..466 169 20.9 Plus
Mhc-PA 1962 CG17927-PA 847..1181 156..466 169 20.9 Plus
Mhc-PD 1962 CG17927-PD 847..1181 156..466 169 20.9 Plus
Mhc-PC 1962 CG17927-PC 847..1181 156..466 169 20.9 Plus
Mhc-PR 1962 CG17927-PR 847..1181 156..466 169 20.9 Plus
lva-PD 2779 CG6450-PD 2011..2505 64..522 168 21.7 Plus
lva-PC 2779 CG6450-PC 2011..2505 64..522 168 21.7 Plus
Gmap-PC 1208 CG33206-PC 36..552 58..519 167 22.3 Plus
Gmap-PB 1208 CG33206-PB 36..552 58..519 167 22.3 Plus
Gmap-PA 1398 CG33206-PA 226..742 58..519 167 22.3 Plus
brp-PI 1397 CG42344-PI 829..1378 14..515 166 17.8 Plus
brp-PK 1707 CG42344-PK 1139..1688 14..515 166 17.8 Plus
brp-PI 1397 CG42344-PI 410..892 80..525 164 23.3 Plus
brp-PK 1707 CG42344-PK 720..1202 80..525 164 23.3 Plus
zip-PH 1964 CG15792-PH 1195..1642 57..523 162 21.6 Plus
zip-PG 1971 CG15792-PG 1187..1634 57..523 162 21.6 Plus
zip-PE 1971 CG15792-PE 1187..1634 57..523 162 21.6 Plus
zip-PC 1971 CG15792-PC 1187..1634 57..523 162 21.6 Plus
zip-PF 1979 CG15792-PF 1195..1642 57..523 162 21.6 Plus
zip-PB 2011 CG15792-PB 1227..1674 57..523 162 21.6 Plus
zip-PD 2016 CG15792-PD 1232..1679 57..523 162 21.6 Plus
zip-PI 2024 CG15792-PI 1240..1687 57..523 162 21.6 Plus
zip-PA 2056 CG15792-PA 1272..1719 57..523 162 21.6 Plus
brp-PK 1707 CG42344-PK 169..604 84..526 162 20.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:01:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20609-PA 612 GI20609-PA 1..612 1..611 2262 72.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:01:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17075-PA 614 GL17075-PA 1..614 1..611 2546 81.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:01:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18469-PA 614 GA18469-PA 1..614 1..611 2503 81.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:01:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21469-PA 611 GM21469-PA 1..611 1..611 3136 99 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10966-PA 611 GD10966-PA 1..611 1..611 3126 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:01:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21049-PA 616 GJ21049-PA 1..616 1..611 2299 72.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:01:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10646-PA 605 GK10646-PA 1..604 1..610 2246 75.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12543-PA 611 GE12543-PA 1..611 1..611 3085 97.2 Plus

LD35238.hyp Sequence

Translation from 161 to 1996

> LD35238.hyp
MFATLKNKIKEETGDDVVQSANQRYPGNNNNNYRLRSRRVSINSNSADDV
GGGGFYNESEQLCELRSQCNELTTKLSTVTQGLQQLQEEKTRVDKTNEIL
LESVRVAQTQKDIYCEEQEKIQNLQQIEIDKLKNLLSFREQESVDRMGLM
RQQTQQIESLSEELERLRPIESVAEDLRDELEQLRHSTQQEKNLLTTTLA
AVQEENRHLKKRMKIVEESRLESLGKLNSEQQVQALIREHKLLEQHLEEA
HLQLSDIKGSWSGQNLALETQVSRLSKQVAEETTEKRKALKSRDDAIESR
KQVSFELEKAKDEIKQRDDKVKLLEEEIDELSVALKECREENEQQVLFER
NKSQNLETEVKDLKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQLD
ETIMQLEIEREEKMTAILRNAEIAQSEDILRQQLRLERSEASDLQERNNQ
LVRDISEARQTLQQVSSTAQDNADKLTEFERVQLEIIEKNKTIKTLNQRL
IDLKKTVQKELRSAQISTDSESHPTTTPGHRISSSSLEAFSTGDKGNCVI
MDEVNFQYLKHVIVKFLTSREVEARHLVRAVSTLLQLTTEEEKLLHDTLN
WKMSWFGMKPT*

LD35238.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
cbs-PA 611 CG4840-PA 1..611 1..611 3018 100 Plus
cbs-PB 603 CG4840-PB 1..603 1..611 2961 98.7 Plus
cbs-PC 601 CG4840-PC 1..601 1..611 2951 98.4 Plus
Rootletin-PF 2048 CG6129-PF 810..1304 53..511 225 21.2 Plus
Rootletin-PE 2048 CG6129-PE 810..1304 53..511 225 21.2 Plus
Rootletin-PF 2048 CG6129-PF 599..1013 55..478 178 19.7 Plus