BDGP Sequence Production Resources |
Search the DGRC for LD35257
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 352 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1234-RA |
Protein status: | LD35257.pep: gold |
Preliminary Size: | 2664 |
Sequenced Size: | 2575 |
Gene | Date | Evidence |
---|---|---|
CG1234 | 2001-01-01 | Release 2 assignment |
CG1234 | 2001-07-04 | Blastp of sequenced clone |
CG1234 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1234 | 2008-04-29 | Release 5.5 accounting |
CG1234 | 2008-08-15 | Release 5.9 accounting |
CG1234 | 2008-12-18 | 5.12 accounting |
2575 bp (2575 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051854
> LD35257.complete TTCCATGTGCTCGTCCCATTCAGAAGGCAACATTTGTGAAAATTAACTAT TAGTTGACTAAAACGGGTGCAATGGGAACTAAAAAGGTCAAAATCAGCTC GGTCAAGCGGGCTGCTCACCTGAAGTCGAAAAAAACACCGCTTTCTAAGC AGCAGCAACAAAAACAGAAGCAAAAGCGCGACCAACTGAAATCGAAGCGC GAACAGGGTCAGAATATATTCTCCCAAAAGGCGAGAAAGCGGGACAACTT AGCACAGCGTAAAAAGCACAACAAATTGGCCTCCCTGGGCTTGGATCCGC TCGAGGAAGACAACGAGGATGGCGACGATGAGATGCTTGAAAACGTTGCG GACATGCTGGATGGCGATGATCTTGCCCTGCTCCAGGCTAACAAACGCAA GCGAAAGGCCAAGACGACCGGCGAGAATGATCCTGACCAAGGACAATCCA TCGGCTTGGAAAGGGCCTATGCCTCTGACACGAAAAAAGAGCAGGACGCG CAAAAAATAAAGTTGGATTTGCTGCCAATCAAGTCCAGGGATGGTCAGAT TATCACCCGTACGACAGAGGTGGATTACATACCTAAGCCCAAGCAGAAAA AGAAGAATGAAGAAGAAGAGGAGGATGATTCCGAGGAAGACGGTGATACG GAGTATGAGGACAGCGATGACGATGTGGTCAATGATGTCGAGGCCGCCAC CGCCGCTCCCGTCCAAAAACTTATCTCTACCACGGATCTACTTATTGCCC GGCAGCAGGAGATCGAACGCCAGAAGTATCGCATTGGAATCATTTGTTCC GGGCTGCTCGAAAAGCCAGAGGATAAGATGCGCAACTTTCATGCTCTGTA CGAACTCATGGACGAAATCAACCCAGCCAGTCGACAGGCCAACCTAATGG CCGTCAGAAAGCTGGCCATAATCTCTGTCACCGAGATATTCAAAGATATC TTGCCCGAGTATCGAGTGGGTCAGGTCGACACCAAGATGCAGACGCTTCG CAAGGCCACTCTTGATCGTGTAACCTTTGAAAACGCCTTGCTTCAACAGT TTAAAAAGTTCCTGCAGAAACTGGAACAGATCACAGCGCAAGTTAACAGG AGAGGTGGTCTAAGGACGCCTCAGACTGTGAAGTTGGCCACCGTGGCAGT ACAGTGCATGTGTGACTTGCTTGTGGCACATCCATACTTTAACTACGTTC AAAACATTGCCCAGCTTCTGGTGTATATGCTGAATTGCAATTATGCAGAG ATGCGAACGGCGGTCCATCAGTGCTTCCGCACAGTCTTTTCCAACGACAA ACGGTTAGAAATGACTCTTTTTATAGTGCGACGCATCAATCACTTGATCA AAACGAAGCAGAACAATGTTCATGTGGAGTGCATCACCTGTCTGATGGGC CTTAAAATCAAGAACGTAAACCTAGATGCCGAAAAGGAGAATGAGCTAAA GCAAAAGAAGCTTGAGTCGCATCGTCAACGCTTACTAAGCTTGTCCAAGA AAGAGCGCAAAAGACGTAAGAAGCTCACCGAGGTTAACAGAGAACTAGAG GAAACCCGTGCCGAGGAAAACAAGCAAGCAAAGCATCAGAAGCTCACCGA GATCATAAAGATGGTGTTTACCATTTACTTCCGCGTGCTTAAGAACGATC CCACCTCCCGCGTGCTGAGCGCTATTCTAGAAGGATTGGCAGAGTTTGCG CACGTCATTAATTTGGACTTCTTCTCCGATCTAATCGATGTGCTCAACCG CATTCTAGAGGACCAAGACGAGCTGGGCTACCGGGAGCGATTGCACTGTG TTCAGACCATATTCGTTATCCTTTCCGGCCAGGGTGAGGTGCTAAACATC GACCCCATCCGATTCTACCAGCACTTTTACCGAAATATGCTGGCGGTGCA GGCAGGCAAAAATCACGATGACTTCGCCATTATTTTGCGAACTTTGGATG AGGTGCTCGTAAAGCGTCGTCGCAATATGAGCCAGCAGCGTCTAATGGCC TTCATGAAACGCTTGCTTACTGGAAGTCTGCATCTGCTCCATAATGGCAC CCTGGCCACGCTTGGCACAATAAAACAAACCTTCCAGCTCACTTCTGTGC TTGACAACCTATTGGATACAGACACTACGATAGGCTCTGGTCGTTACGAT CCCGAACTGGACGATCCTGAGTACTGTAACGCAGCAAGCACAGCGCTGTA TGAGCTTGCGCTTCTGGCACGTCACTATCATCCCACGGTGCGACGGATGG CCGTTCACATTGCTCATGGAGTGCCAGCAACGGGCGAGGGAGCTTTGCCC ACGGAAATTGGCAAACTTACCTCCCACGAGCTGTTTACGCAATTCGACAG CACTCAGATGGCTTTCAATCCGACAATACCGCTGCCAAAAGCGGGTCAAC CAAAACTAAAAAGGGGCAAACACTTATATATTCGCTCGGACTTCAAACAG GAGTACGGAAAACTGCTGCAGCAAGGAAAAGTTTCACAGACGAAGGATAA ACAAACCTTACAAATTGATTTTTTCAGTGCACTTCAATAAAGAAAAATTT GAAGATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3071292..3072906 | 1695..81 | 8060 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 3070612..3071235 | 2317..1694 | 3120 | 100 | Minus |
chr3R | 27901430 | chr3R | 3070316..3070555 | 2557..2318 | 1200 | 100 | Minus |
chr3R | 27901430 | chr3R | 3072959..3073038 | 80..1 | 400 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7245208..7246822 | 1695..81 | 8075 | 100 | Minus |
3R | 32079331 | 3R | 7244528..7245151 | 2317..1694 | 3120 | 100 | Minus |
3R | 32079331 | 3R | 7244232..7244471 | 2557..2318 | 1200 | 100 | Minus |
3R | 32079331 | 3R | 7246875..7246954 | 80..1 | 400 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 6986039..6987653 | 1695..81 | 8075 | 100 | Minus |
3R | 31820162 | 3R | 6985359..6985982 | 2317..1694 | 3120 | 100 | Minus |
3R | 31820162 | 3R | 6985063..6985302 | 2557..2318 | 1200 | 100 | Minus |
3R | 31820162 | 3R | 6987706..6987785 | 80..1 | 400 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6786 | 148..214 | 119 | 64.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2631..2677 | 147..196 | 117 | 74 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6835 | 148..206 | 115 | 66.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3070316..3070555 | 2318..2557 | 100 | <- | Minus |
chr3R | 3070612..3071235 | 1694..2317 | 100 | <- | Minus |
chr3R | 3071294..3072906 | 81..1693 | 97 | <- | Minus |
chr3R | 3072959..3073038 | 1..80 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 1..2469 | 72..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 1..2469 | 72..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 1..2469 | 72..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 1..2469 | 72..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 1..2469 | 72..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 14..2570 | 1..2557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 42..2598 | 1..2557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 16..2572 | 1..2557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 14..2570 | 1..2557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1234-RA | 16..2572 | 1..2557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7244232..7244471 | 2318..2557 | 100 | <- | Minus |
3R | 7244528..7245151 | 1694..2317 | 100 | <- | Minus |
3R | 7245210..7246822 | 81..1693 | 100 | <- | Minus |
3R | 7246875..7246954 | 1..80 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7244232..7244471 | 2318..2557 | 100 | <- | Minus |
3R | 7244528..7245151 | 1694..2317 | 100 | <- | Minus |
3R | 7245210..7246822 | 81..1693 | 100 | <- | Minus |
3R | 7246875..7246954 | 1..80 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7244232..7244471 | 2318..2557 | 100 | <- | Minus |
3R | 7244528..7245151 | 1694..2317 | 100 | <- | Minus |
3R | 7245210..7246822 | 81..1693 | 100 | <- | Minus |
3R | 7246875..7246954 | 1..80 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3069954..3070193 | 2318..2557 | 100 | <- | Minus |
arm_3R | 3070250..3070873 | 1694..2317 | 100 | <- | Minus |
arm_3R | 3070932..3072544 | 81..1693 | 100 | <- | Minus |
arm_3R | 3072597..3072676 | 1..80 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6985063..6985302 | 2318..2557 | 100 | <- | Minus |
3R | 6985359..6985982 | 1694..2317 | 100 | <- | Minus |
3R | 6986041..6987653 | 81..1693 | 100 | <- | Minus |
3R | 6987706..6987785 | 1..80 | 100 | Minus |
Translation from 71 to 2539
> LD35257.pep MGTKKVKISSVKRAAHLKSKKTPLSKQQQQKQKQKRDQLKSKREQGQNIF SQKARKRDNLAQRKKHNKLASLGLDPLEEDNEDGDDEMLENVADMLDGDD LALLQANKRKRKAKTTGENDPDQGQSIGLERAYASDTKKEQDAQKIKLDL LPIKSRDGQIITRTTEVDYIPKPKQKKKNEEEEEDDSEEDGDTEYEDSDD DVVNDVEAATAAPVQKLISTTDLLIARQQEIERQKYRIGIICSGLLEKPE DKMRNFHALYELMDEINPASRQANLMAVRKLAIISVTEIFKDILPEYRVG QVDTKMQTLRKATLDRVTFENALLQQFKKFLQKLEQITAQVNRRGGLRTP QTVKLATVAVQCMCDLLVAHPYFNYVQNIAQLLVYMLNCNYAEMRTAVHQ CFRTVFSNDKRLEMTLFIVRRINHLIKTKQNNVHVECITCLMGLKIKNVN LDAEKENELKQKKLESHRQRLLSLSKKERKRRKKLTEVNRELEETRAEEN KQAKHQKLTEIIKMVFTIYFRVLKNDPTSRVLSAILEGLAEFAHVINLDF FSDLIDVLNRILEDQDELGYRERLHCVQTIFVILSGQGEVLNIDPIRFYQ HFYRNMLAVQAGKNHDDFAIILRTLDEVLVKRRRNMSQQRLMAFMKRLLT GSLHLLHNGTLATLGTIKQTFQLTSVLDNLLDTDTTIGSGRYDPELDDPE YCNAASTALYELALLARHYHPTVRRMAVHIAHGVPATGEGALPTEIGKLT SHELFTQFDSTQMAFNPTIPLPKAGQPKLKRGKHLYIRSDFKQEYGKLLQ QGKVSQTKDKQTLQIDFFSALQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17313-PA | 825 | GF17313-PA | 1..825 | 1..822 | 3625 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25293-PA | 822 | GG25293-PA | 1..822 | 1..822 | 4276 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19284-PA | 829 | GH19284-PA | 1..826 | 1..821 | 3347 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1234-PA | 822 | CG1234-PA | 1..822 | 1..822 | 4176 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23496-PA | 828 | GI23496-PA | 1..825 | 1..821 | 3433 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12190-PA | 826 | GL12190-PA | 1..826 | 1..822 | 3548 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11564-PA | 826 | GA11564-PA | 1..826 | 1..822 | 3549 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10495-PA | 823 | GM10495-PA | 1..823 | 1..822 | 4314 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19492-PA | 823 | GD19492-PA | 1..823 | 1..822 | 4297 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10246-PA | 825 | GJ10246-PA | 1..822 | 1..821 | 3499 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12258-PA | 825 | GK12258-PA | 1..825 | 1..822 | 3282 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25803-PA | 822 | GE25803-PA | 1..822 | 1..822 | 4238 | 96.7 | Plus |
Translation from 71 to 2539
> LD35257.hyp MGTKKVKISSVKRAAHLKSKKTPLSKQQQQKQKQKRDQLKSKREQGQNIF SQKARKRDNLAQRKKHNKLASLGLDPLEEDNEDGDDEMLENVADMLDGDD LALLQANKRKRKAKTTGENDPDQGQSIGLERAYASDTKKEQDAQKIKLDL LPIKSRDGQIITRTTEVDYIPKPKQKKKNEEEEEDDSEEDGDTEYEDSDD DVVNDVEAATAAPVQKLISTTDLLIARQQEIERQKYRIGIICSGLLEKPE DKMRNFHALYELMDEINPASRQANLMAVRKLAIISVTEIFKDILPEYRVG QVDTKMQTLRKATLDRVTFENALLQQFKKFLQKLEQITAQVNRRGGLRTP QTVKLATVAVQCMCDLLVAHPYFNYVQNIAQLLVYMLNCNYAEMRTAVHQ CFRTVFSNDKRLEMTLFIVRRINHLIKTKQNNVHVECITCLMGLKIKNVN LDAEKENELKQKKLESHRQRLLSLSKKERKRRKKLTEVNRELEETRAEEN KQAKHQKLTEIIKMVFTIYFRVLKNDPTSRVLSAILEGLAEFAHVINLDF FSDLIDVLNRILEDQDELGYRERLHCVQTIFVILSGQGEVLNIDPIRFYQ HFYRNMLAVQAGKNHDDFAIILRTLDEVLVKRRRNMSQQRLMAFMKRLLT GSLHLLHNGTLATLGTIKQTFQLTSVLDNLLDTDTTIGSGRYDPELDDPE YCNAASTALYELALLARHYHPTVRRMAVHIAHGVPATGEGALPTEIGKLT SHELFTQFDSTQMAFNPTIPLPKAGQPKLKRGKHLYIRSDFKQEYGKLLQ QGKVSQTKDKQTLQIDFFSALQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1234-PA | 822 | CG1234-PA | 1..822 | 1..822 | 4176 | 100 | Plus |