BDGP Sequence Production Resources |
Search the DGRC for LD35289
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 352 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8003-RA |
Protein status: | LD35289.pep: gold |
Preliminary Size: | 1410 |
Sequenced Size: | 1363 |
Gene | Date | Evidence |
---|---|---|
CG8003 | 2001-01-01 | Release 2 assignment |
CG8003 | 2001-10-10 | Blastp of sequenced clone |
CG8003 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8003 | 2008-04-29 | Release 5.5 accounting |
CG8003 | 2008-08-15 | Release 5.9 accounting |
CG8003 | 2008-12-18 | 5.12 accounting |
1363 bp (1363 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061422
> LD35289.complete AAACAGTGGAGTTTCTTGATTTCCATATTCCGAAGAGCACTTGAAAAATC CAACAAAAACAAACAATCGAATCACAATGACCGAGGAAAGCAAGAAGATC GTACAGCTGGACGACGTGCAGCGCCAGTTGCTGGATCATCTGGCCAAGAA TGACACCAGTGGATTCAAGCAGCTGCTGAGCGGAGTGAGGAATGTTAATT TCGTGGACGACACCGGGATGTCGTGTTTGGCCCACGCCAGCTTCAAGGGA AACCGCGAGGCGGTGCAGCTGCTCCTGGACATGGGTGCCGACATAAACCT CAATCAGCATGGAGCTGATTATACGCCACTGCATTTCGCCGCTCTATCGG GCAATACACATGTGTGCCGGCTTCTTTTGGATGCTGGCATCAAGCCGGGT AGCATCAATAGTGTCAACAGGACCGCCGCCCAAATGGCCGCCTTTGTGGG CAACCACGCCTGCGTGGAGACCATCAACAACTATGTGACCCAGTCGAGTT TGGAGTACTACACCCAAGTGCATGGCCAGCAGACGGAGCCGCATATACCA CCCAGCTTACTCAAATCGTTCCACGCCTTTGTCACCGAAATCAACCTGCA TCCCGTGAGGATTGCCCTGAATGTGCAGTCCTTGGGATTGCTTAGGATCC TGTCCAGTCTGCGCAAGACGCTGGCTTTGATGTGCGAAAAGGAGATGCAG AAGTCGCATGACCTCAACGAGCTGCTGGCCTTCAAGTTCCATTATCAGGG CTGGATTTTGGCCGAACTAATACGCTGCGAGGAGCAATTCAAGGCGCAGC ACAAGGAGAAAAGTGGCGAGGAGGCGGGCGATGCGAACAAGAACGATTTC ATCGAGATGTTTGTGAAGCGGGTGCTCAAGGAGAACAAGCTGGGCCAGCT GGACTATGTGGAATACACGTTGCGCGAATGTGCCAGGGAGTTTCCCGTGA GAGAGTGCACCATCTTCCGGCAAATCGCAACGCAATTTGGCGCCAAGGAT GCCCCACCAGCACTGACTGTCCTGCGAAATGCCATCAATGGGATGAGGTG GATTACGGACGAGGGCAACTACTGCAGCACCTGCGGCGCCGAGAAACCGG ACAAGAAGTGCTCCAAGTGCAAGGCGGTGCAGTATTGCGATCGCGAATGC CAGCGGCTGCATTGGTTCATGCACAAGAAGAACTGTGCCCGCCTCCTGGC CCAATCCCAAGCCCAAGCCCAAGCCCAGCCGCAATCGCAAGCGAAGGGAG CCATTGACACGGCCGAGCTGCGCGAGGAACTGTCCAAACTGACTGCGTAA TCCTGTGCTCCTTTGTAACGCCAATAAATGTAACATAAAACCAGAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 10653229..10654004 | 283..1058 | 3835 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 10654063..10654350 | 1057..1344 | 1365 | 98.3 | Plus |
chr3L | 24539361 | chr3L | 10652877..10653162 | 1..284 | 1300 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 10661849..10662624 | 283..1058 | 3880 | 100 | Plus |
3L | 28110227 | 3L | 10662683..10662973 | 1057..1347 | 1455 | 100 | Plus |
3L | 28110227 | 3L | 10661499..10661782 | 1..284 | 1420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 10654949..10655724 | 283..1058 | 3880 | 100 | Plus |
3L | 28103327 | 3L | 10655783..10656073 | 1057..1347 | 1455 | 100 | Plus |
3L | 28103327 | 3L | 10654599..10654882 | 1..284 | 1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10652877..10653161 | 1..283 | 98 | -> | Plus |
chr3L | 10653230..10654003 | 284..1057 | 99 | -> | Plus |
chr3L | 10654064..10654350 | 1058..1344 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 1..1224 | 77..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 1..1224 | 77..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 1..1224 | 77..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 1..1224 | 77..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 1..1224 | 77..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 21..1364 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 21..1364 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 25..1368 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 21..1364 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8003-RA | 25..1368 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10661499..10661781 | 1..283 | 100 | -> | Plus |
3L | 10661850..10662623 | 284..1057 | 100 | -> | Plus |
3L | 10662684..10662970 | 1058..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10661499..10661781 | 1..283 | 100 | -> | Plus |
3L | 10661850..10662623 | 284..1057 | 100 | -> | Plus |
3L | 10662684..10662970 | 1058..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10661499..10661781 | 1..283 | 100 | -> | Plus |
3L | 10661850..10662623 | 284..1057 | 100 | -> | Plus |
3L | 10662684..10662970 | 1058..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10654599..10654881 | 1..283 | 100 | -> | Plus |
arm_3L | 10654950..10655723 | 284..1057 | 100 | -> | Plus |
arm_3L | 10655784..10656070 | 1058..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10654599..10654881 | 1..283 | 100 | -> | Plus |
3L | 10654950..10655723 | 284..1057 | 100 | -> | Plus |
3L | 10655784..10656070 | 1058..1344 | 100 | Plus |
Translation from 76 to 1299
> LD35289.pep MTEESKKIVQLDDVQRQLLDHLAKNDTSGFKQLLSGVRNVNFVDDTGMSC LAHASFKGNREAVQLLLDMGADINLNQHGADYTPLHFAALSGNTHVCRLL LDAGIKPGSINSVNRTAAQMAAFVGNHACVETINNYVTQSSLEYYTQVHG QQTEPHIPPSLLKSFHAFVTEINLHPVRIALNVQSLGLLRILSSLRKTLA LMCEKEMQKSHDLNELLAFKFHYQGWILAELIRCEEQFKAQHKEKSGEEA GDANKNDFIEMFVKRVLKENKLGQLDYVEYTLRECAREFPVRECTIFRQI ATQFGAKDAPPALTVLRNAINGMRWITDEGNYCSTCGAEKPDKKCSKCKA VQYCDRECQRLHWFMHKKNCARLLAQSQAQAQAQPQSQAKGAIDTAELRE ELSKLTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10604-PA | 407 | GF10604-PA | 1..407 | 1..407 | 1851 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15447-PA | 403 | GG15447-PA | 1..403 | 1..407 | 2079 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14954-PA | 399 | GH14954-PA | 3..399 | 10..407 | 1717 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8003-PB | 407 | CG8003-PB | 1..407 | 1..407 | 2128 | 100 | Plus |
CG8003-PA | 407 | CG8003-PA | 1..407 | 1..407 | 2128 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11481-PA | 401 | GI11481-PA | 1..401 | 1..407 | 1724 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15477-PA | 289 | GL15477-PA | 1..264 | 1..265 | 1134 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20758-PA | 404 | GA20758-PA | 1..404 | 1..407 | 1783 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25221-PA | 407 | GM25221-PA | 1..407 | 1..407 | 2141 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14254-PA | 407 | GD14254-PA | 1..407 | 1..407 | 2149 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13675-PA | 401 | GJ13675-PA | 1..401 | 1..407 | 1749 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12277-PA | 401 | GK12277-PA | 1..401 | 1..407 | 1745 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21757-PA | 403 | GE21757-PA | 1..403 | 1..407 | 2063 | 94.1 | Plus |
Translation from 76 to 1299
> LD35289.hyp MTEESKKIVQLDDVQRQLLDHLAKNDTSGFKQLLSGVRNVNFVDDTGMSC LAHASFKGNREAVQLLLDMGADINLNQHGADYTPLHFAALSGNTHVCRLL LDAGIKPGSINSVNRTAAQMAAFVGNHACVETINNYVTQSSLEYYTQVHG QQTEPHIPPSLLKSFHAFVTEINLHPVRIALNVQSLGLLRILSSLRKTLA LMCEKEMQKSHDLNELLAFKFHYQGWILAELIRCEEQFKAQHKEKSGEEA GDANKNDFIEMFVKRVLKENKLGQLDYVEYTLRECAREFPVRECTIFRQI ATQFGAKDAPPALTVLRNAINGMRWITDEGNYCSTCGAEKPDKKCSKCKA VQYCDRECQRLHWFMHKKNCARLLAQSQAQAQAQPQSQAKGAIDTAELRE ELSKLTA*