Clone LD35441 Report

Gene	Date	Evidence
CG2139	2001-09-19	Blastp of sequenced clone
CG2139	2003-01-01	Sim4 clustering to Release 3
aralar1	2008-04-29	Release 5.5 accounting
aralar1	2008-08-15	Release 5.9 accounting
aralar1	2008-12-18	5.12 accounting

Clone Sequence Records

LD35441.complete Sequence

2325 bp (2325 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058654

> LD35441.complete
TGGTTTCGACTCGGGCGGATTGGATTAGATCGGCTTGCATTGATGAGCTA
ATTAGACGCGGGAATTGCTCGCGGAAACAACACTGAACCAGAAGCAGTCA
AAGCTAAAAAACAGGAATGCCGTTGACCAAGAGTTTGCCAAATTCTCCGT
CGCTTTTGAAGCGCGCCGGCACCGAAAAGTTGCGAGAGGTGTTCCTGAAG
TACGCATCCATCCAGAAGAATGGCGAGCACTATATGACCAGCGAGGACTT
CGTGCGAAAGTTCCTGGGACTCTTTTCCGAATCTGCATTTAATGACGAAT
CGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACTCATC
TCCTTCTCGGAGTTCCAGGCGTTCGAGGGTCTGCTCTGCACTCCAGATGC
CCTCTACAGGACCGCTTTCCAGCTGTTCGACCGCAAGGGCAACGGCACTG
TTTCCTATGCTGACTTCGCTGATGTCGTACAAAAAACTGAACTGCACTCA
AAGATACCTTTTAGCTTAGATGGCCCCTTTATCAAGCGCTACTTTGGTGA
TAAGAAGCAACGCCTTATCAACTATGCTGAGTTCACGCAGCTGCTGCACG
ACTTTCACGAGGAGCACGCGATGGAGGCCTTCCGCAGCAAGGATCCAGCT
GGCACTGGGTTCATCTCGCCATTGGACTTCCAGGACATCATAGTTAATGT
TAAGCGGCATTTACTGACCCCCGGCGTCAGGGACAATCTAGTTTCGGTAA
CTGAGGGTCACAAAGTGAGCTTCCCGTATTTCATCGCATTTACCTCGCTG
CTGAACAACATGGAACTGATCAAACAAGTCTACCTGCACGCCACCGAGGG
CAGTCGCACGGATATGATCACCAAGGATCAGATCCTCCTCGCCGCCCAAA
CGATGAGCCAAATCACGCCGCTGGAGATCGACATACTTTTCCACCTGGCG
GGCGCCGTCCATCAAGCAGGCCGCATCGACTATAGTGACCTGAGCAACAT
CGCACCCGAGCATTACACCAAGCATATGACACATCGTCTGGCGGAGATCA
AGGCGGTGGAGAGTCCTGCGGACCGATCTGCCTTTATTCAGGTCCTGGAG
AGCTCTTACCGTTTCACTCTCGGTTCCTTTGCCGGCGCTGTGGGCGCCAC
TGTGGTCTACCCCATCGATCTAGTCAAGACTCGAATGCAGAACCAGCGAG
CGGGTTCCTATATTGGTGAAGTTGCCTATCGAAACTCATGGGACTGCTTC
AAAAAGGTGGTTCGCCACGAGGGATTCATGGGTCTCTACAGAGGTCTCCT
GCCCCAGCTAATGGGCGTGGCCCCCGAGAAAGCCATCAAACTGACGGTGA
ATGATTTGGTGAGGGACAAACTCACCGACAAGAAGGGCAACATTCCCACA
TGGGCGGAAGTTCTGGCTGGTGGATGTGCCGGTGCGTCGCAGGTGGTGTT
CACCAATCCCCTGGAGATTGTGAAGATCCGTCTCCAGGTGGCGGGAGAAA
TCGCTAGTGGGAGCAAGATCCGCGCGTGGTCGGTGGTCCGGGAACTGGGA
CTCTTTGGCCTCTACAAGGGAGCCAGAGCATGTCTCCTCCGCGATGTGCC
ATTCTCGGCCATCTACTTCCCGACCTACGCCCACACCAAGGCCATGATGG
CCGACAAGGACGGCTACAATCATCCACTCACCCTGCTGGCCGCCGGTGCC
ATCGCCGGTGTTCCGGCCGCCTCCCTTGTCACGCCCGCCGACGTCATCAA
GACCCGCCTTCAGGTGGTTGCCCGATCTGGACAGACCACCTACACCGGCG
TATGGGATGCCACCAAGAAGATCATGGCCGAGGAGGGACCCAGAGCCTTC
TGGAAGGGCACAGCCGCTCGAGTGTTCCGTTCCTCACCACAGTTCGGTGT
GACCCTGGTGACCTACGAACTGCTACAGCGCCTCTTCTACGTGGACTTCG
GAGGCACTCAGCCCAAGGGATCCGAGGCGCACAAGATCACCACTCCCCTG
GAACAGGCGGCTGCGTCGGTGACCACCGAAAACGTGGACCACATTGGTGG
CTACCGGGCGGCAGTTCCTCTTCTGGCGGGAGTGGAGTCCAAGTTCGGGT
TGTATCTGCCGCGATTTGGACGCGGAGTAACCGCTGCCTCGCCCTCGACG
GCCACGGGATCCTGATTATATTGGCGCCACCGCCTGCCAAGCGCCACGTA
GTCTACGGAATGCAGAAGGGATTGGCGGGATTGGGCTCCGGTGGAATTAG
ATATGGGATATATTTTTTGCTAGGACGCGTTTACACAAAATACACAAACA
CACAGAAAAAAAAAAAAAAAAAAAA

LD35441.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:18:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
aralar1-RD	2420	aralar1-RD	114..2420	1..2307	11535	100	Plus
aralar1-RA	2859	aralar1-RA	114..2420	1..2307	11535	100	Plus
aralar1.a	2859	aralar1.a	114..2420	1..2307	11535	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:57:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	26269109..26269720	1866..1255	3060	100	Minus
chr3R	27901430	chr3R	26268610..26269049	2305..1866	2185	99.8	Minus
chr3R	27901430	chr3R	26270889..26271113	970..746	1125	100	Minus
chr3R	27901430	chr3R	26271175..26271372	749..552	990	100	Minus
chr3R	27901430	chr3R	26269957..26270124	1137..970	840	100	Minus
chr3R	27901430	chr3R	26271585..26271751	463..297	820	99.4	Minus
chr3R	27901430	chr3R	26272349..26272502	297..144	755	99.4	Minus
chr3R	27901430	chr3R	26272772..26272914	143..1	715	100	Minus
chr3R	27901430	chr3R	26269773..26269894	1258..1137	610	100	Minus
chr3R	27901430	chr3R	26271439..26271531	551..459	465	100	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:30:01 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:57:26

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	30446564..30447175	1866..1255	3060	100	Minus
3R	32079331	3R	30446063..30446504	2307..1866	2210	100	Minus
3R	32079331	3R	30448346..30448570	970..746	1125	100	Minus
3R	32079331	3R	30448632..30448829	749..552	990	100	Minus
3R	32079331	3R	30447412..30447579	1137..970	840	100	Minus
3R	32079331	3R	30449042..30449208	463..297	820	99.4	Minus
3R	32079331	3R	30449806..30449959	297..144	770	100	Minus
3R	32079331	3R	30450229..30450371	143..1	715	100	Minus
3R	32079331	3R	30447228..30447349	1258..1137	610	100	Minus
3R	32079331	3R	30448896..30448988	551..459	465	100	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:41:23

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	30187395..30188006	1866..1255	3060	100	Minus
3R	31820162	3R	30186894..30187335	2307..1866	2210	100	Minus
3R	31820162	3R	30189177..30189401	970..746	1125	100	Minus
3R	31820162	3R	30189463..30189660	749..552	990	100	Minus
3R	31820162	3R	30188243..30188410	1137..970	840	100	Minus
3R	31820162	3R	30189873..30190039	463..297	820	99.4	Minus
3R	31820162	3R	30190637..30190790	297..144	770	100	Minus
3R	31820162	3R	30191060..30191202	143..1	715	100	Minus
3R	31820162	3R	30188059..30188180	1258..1137	610	100	Minus
3R	31820162	3R	30189727..30189819	551..459	465	100	Minus

Blast to na_te.dros performed on 2019-03-16 02:57:26 has no hits.

LD35441.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:58:10 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	26268610..26269048	1867..2305	99	<-	Minus
chr3R	26269109..26269718	1257..1866	100	<-	Minus
chr3R	26269775..26269893	1138..1256	100	<-	Minus
chr3R	26269957..26270123	971..1137	100	<-	Minus
chr3R	26270889..26271112	747..970	100	<-	Minus
chr3R	26271178..26271372	552..746	100	<-	Minus
chr3R	26271439..26271530	460..551	100	<-	Minus
chr3R	26271589..26271751	297..459	100	<-	Minus
chr3R	26272350..26272502	144..296	99	<-	Minus
chr3R	26272772..26272914	1..143	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:17:40 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	1..2049	117..2165	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:00:40 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	1..2049	117..2165	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:37:48 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RF	1..2085	117..2201	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:31:06 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	1..2049	117..2165	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:26:39 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RF	1..2085	117..2201	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:48:13 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	36..2340	1..2305	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:00:40 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	36..2340	1..2305	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:37:48 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RA	36..2340	1..2305	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:31:06 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RD	36..2340	1..2305	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:26:39 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
aralar1-RA	36..2340	1..2305	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:10 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	30446065..30446503	1867..2305	100	<-	Minus
3R	30446564..30447173	1257..1866	100	<-	Minus
3R	30447230..30447348	1138..1256	100	<-	Minus
3R	30447412..30447578	971..1137	100	<-	Minus
3R	30448346..30448569	747..970	100	<-	Minus
3R	30448635..30448829	552..746	100	<-	Minus
3R	30448896..30448987	460..551	100	<-	Minus
3R	30449046..30449208	297..459	100	<-	Minus
3R	30449807..30449959	144..296	100	<-	Minus
3R	30450229..30450371	1..143	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:10 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	30446065..30446503	1867..2305	100	<-	Minus
3R	30446564..30447173	1257..1866	100	<-	Minus
3R	30447230..30447348	1138..1256	100	<-	Minus
3R	30447412..30447578	971..1137	100	<-	Minus
3R	30448346..30448569	747..970	100	<-	Minus
3R	30448635..30448829	552..746	100	<-	Minus
3R	30448896..30448987	460..551	100	<-	Minus
3R	30449046..30449208	297..459	100	<-	Minus
3R	30449807..30449959	144..296	100	<-	Minus
3R	30450229..30450371	1..143	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:10 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	30446065..30446503	1867..2305	100	<-	Minus
3R	30446564..30447173	1257..1866	100	<-	Minus
3R	30447230..30447348	1138..1256	100	<-	Minus
3R	30447412..30447578	971..1137	100	<-	Minus
3R	30448346..30448569	747..970	100	<-	Minus
3R	30448635..30448829	552..746	100	<-	Minus
3R	30448896..30448987	460..551	100	<-	Minus
3R	30449046..30449208	297..459	100	<-	Minus
3R	30449807..30449959	144..296	100	<-	Minus
3R	30450229..30450371	1..143	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:37:48 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	26274768..26274930	297..459	100	<-	Minus
arm_3R	26275529..26275681	144..296	100	<-	Minus
arm_3R	26275951..26276093	1..143	100		Minus
arm_3R	26271787..26272225	1867..2305	100	<-	Minus
arm_3R	26272286..26272895	1257..1866	100	<-	Minus
arm_3R	26272952..26273070	1138..1256	100	<-	Minus
arm_3R	26273134..26273300	971..1137	100	<-	Minus
arm_3R	26274068..26274291	747..970	100	<-	Minus
arm_3R	26274357..26274551	552..746	100	<-	Minus
arm_3R	26274618..26274709	460..551	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:07:36 Download gff for LD35441.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	30186896..30187334	1867..2305	100	<-	Minus
3R	30187395..30188004	1257..1866	100	<-	Minus
3R	30188061..30188179	1138..1256	100	<-	Minus
3R	30188243..30188409	971..1137	100	<-	Minus
3R	30189177..30189400	747..970	100	<-	Minus
3R	30189466..30189660	552..746	100	<-	Minus
3R	30189727..30189818	460..551	100	<-	Minus
3R	30189877..30190039	297..459	100	<-	Minus
3R	30190638..30190790	144..296	100	<-	Minus
3R	30191060..30191202	1..143	100		Minus

LD35441.hyp Sequence

Translation from 116 to 2164

> LD35441.hyp
MPLTKSLPNSPSLLKRAGTEKLREVFLKYASIQKNGEHYMTSEDFVRKFL
GLFSESAFNDESVRLLANIADTSKDGLISFSEFQAFEGLLCTPDALYRTA
FQLFDRKGNGTVSYADFADVVQKTELHSKIPFSLDGPFIKRYFGDKKQRL
INYAEFTQLLHDFHEEHAMEAFRSKDPAGTGFISPLDFQDIIVNVKRHLL
TPGVRDNLVSVTEGHKVSFPYFIAFTSLLNNMELIKQVYLHATEGSRTDM
ITKDQILLAAQTMSQITPLEIDILFHLAGAVHQAGRIDYSDLSNIAPEHY
TKHMTHRLAEIKAVESPADRSAFIQVLESSYRFTLGSFAGAVGATVVYPI
DLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMG
VAPEKAIKLTVNDLVRDKLTDKKGNIPTWAEVLAGGCAGASQVVFTNPLE
IVKIRLQVAGEIASGSKIRAWSVVRELGLFGLYKGARACLLRDVPFSAIY
FPTYAHTKAMMADKDGYNHPLTLLAAGAIAGVPAASLVTPADVIKTRLQV
VARSGQTTYTGVWDATKKIMAEEGPRAFWKGTAARVFRSSPQFGVTLVTY
ELLQRLFYVDFGGTQPKGSEAHKITTPLEQAAASVTTENVDHIGGYRAAV
PLLAGVESKFGLYLPRFGRGVTAASPSTATGS*

LD35441.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:03:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
aralar1-PF	694	CG2139-PF	1..682	1..682	3496	100	Plus
aralar1-PD	682	CG2139-PD	1..682	1..682	3496	100	Plus
aralar1-PA	682	CG2139-PA	1..682	1..682	3496	100	Plus
aralar1-PB	679	CG2139-PB	7..679	10..682	3449	100	Plus
aralar1-PC	695	CG2139-PC	23..695	10..682	3449	100	Plus

LD35441.pep Sequence

Translation from 116 to 2164

> LD35441.pep
MPLTKSLPNSPSLLKRAGTEKLREVFLKYASIQKNGEHYMTSEDFVRKFL
GLFSESAFNDESVRLLANIADTSKDGLISFSEFQAFEGLLCTPDALYRTA
FQLFDRKGNGTVSYADFADVVQKTELHSKIPFSLDGPFIKRYFGDKKQRL
INYAEFTQLLHDFHEEHAMEAFRSKDPAGTGFISPLDFQDIIVNVKRHLL
TPGVRDNLVSVTEGHKVSFPYFIAFTSLLNNMELIKQVYLHATEGSRTDM
ITKDQILLAAQTMSQITPLEIDILFHLAGAVHQAGRIDYSDLSNIAPEHY
TKHMTHRLAEIKAVESPADRSAFIQVLESSYRFTLGSFAGAVGATVVYPI
DLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMG
VAPEKAIKLTVNDLVRDKLTDKKGNIPTWAEVLAGGCAGASQVVFTNPLE
IVKIRLQVAGEIASGSKIRAWSVVRELGLFGLYKGARACLLRDVPFSAIY
FPTYAHTKAMMADKDGYNHPLTLLAAGAIAGVPAASLVTPADVIKTRLQV
VARSGQTTYTGVWDATKKIMAEEGPRAFWKGTAARVFRSSPQFGVTLVTY
ELLQRLFYVDFGGTQPKGSEAHKITTPLEQAAASVTTENVDHIGGYRAAV
PLLAGVESKFGLYLPRFGRGVTAASPSTATGS*

LD35441.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:43:30

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF23336-PA	693	GF23336-PA	22..693	9..682	3430	95	Plus
Dana\GF23042-PA	317	GF23042-PA	33..305	345..602	541	43.1	Plus
Dana\GF23043-PA	312	GF23043-PA	30..297	345..602	461	43.6	Plus
Dana\GF23041-PA	275	GF23041-PA	1..260	352..602	398	40.2	Plus
Dana\GF16639-PA	311	GF16639-PA	34..306	336..607	311	29.2	Plus
Dana\GF16639-PA	311	GF16639-PA	31..214	432..610	163	27.7	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:43:30

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG11935-PA	682	GG11935-PA	1..682	1..682	3605	98.2	Plus
Dere\GG18542-PA	321	GG18542-PA	37..309	345..602	532	41.6	Plus
Dere\GG18553-PA	314	GG18553-PA	22..299	336..602	460	40.4	Plus
Dere\GG10106-PA	399	GG10106-PA	44..296	333..591	311	31.1	Plus
Dere\GG12807-PA	306	GG12807-PA	9..295	316..601	307	30.5	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:43:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH17431-PA	695	GH17431-PA	23..681	10..669	3074	86.1	Plus
Dgri\GH23533-PA	324	GH23533-PA	40..312	345..602	547	43.1	Plus
Dgri\GH23534-PA	315	GH23534-PA	20..300	332..602	537	41.3	Plus
Dgri\GH15324-PA	314	GH15324-PA	36..308	336..607	306	30.6	Plus
Dgri\GH19165-PA	383	GH19165-PA	18..288	333..617	301	31.6	Plus
Dgri\GH19165-PA	383	GH19165-PA	4..193	421..610	177	26.2	Plus
Dgri\GH15324-PA	314	GH15324-PA	33..220	432..617	157	27.2	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
aralar1-PF	694	CG2139-PF	1..682	1..682	3496	100	Plus
aralar1-PD	682	CG2139-PD	1..682	1..682	3496	100	Plus
aralar1-PA	682	CG2139-PA	1..682	1..682	3496	100	Plus
aralar1-PB	679	CG2139-PB	7..679	10..682	3449	100	Plus
aralar1-PC	695	CG2139-PC	23..695	10..682	3449	100	Plus
aralar1-PE	707	CG2139-PE	23..707	10..682	3426	98.2	Plus
GC1-PB	321	CG18347-PB	28..309	336..602	544	41.7	Plus
GC1-PA	321	CG18347-PA	28..309	336..602	544	41.7	Plus
GC2-PB	319	CG12201-PB	27..304	336..602	500	40.4	Plus
GC2-PD	240	CG12201-PD	1..225	390..602	366	38.6	Plus
CG5254-PA	306	CG5254-PA	14..295	329..601	306	29.4	Plus
sea-PE	317	CG6782-PE	40..312	336..607	301	28.8	Plus
sea-PD	317	CG6782-PD	40..312	336..607	301	28.8	Plus
sea-PC	317	CG6782-PC	40..312	336..607	301	28.8	Plus
sea-PA	317	CG6782-PA	40..312	336..607	301	28.8	Plus
CG4995-PD	360	CG4995-PD	5..257	333..591	290	29.9	Plus
CG4995-PC	360	CG4995-PC	5..257	333..591	290	29.9	Plus
CG4995-PB	399	CG4995-PB	44..296	333..591	290	29.9	Plus
CG4995-PA	399	CG4995-PA	44..296	333..591	290	29.9	Plus
mfrn-PA	379	CG4963-PA	19..282	334..609	277	29.3	Plus
MME1-PA	299	CG3476-PA	18..298	333..604	274	29.5	Plus
CG2616-PB	449	CG2616-PB	103..422	342..608	272	26.5	Plus
CG2616-PA	449	CG2616-PA	103..422	342..608	272	26.5	Plus
CG9582-PB	300	CG9582-PB	15..291	331..603	270	28	Plus
CG9582-PA	300	CG9582-PA	15..291	331..603	270	28	Plus
colt-PD	306	CG3057-PD	19..301	333..609	268	28.2	Plus
colt-PA	306	CG3057-PA	19..301	333..609	268	28.2	Plus
Bmcp-PB	303	CG7314-PB	10..302	333..605	267	27.2	Plus
Bmcp-PA	303	CG7314-PA	10..302	333..605	267	27.2	Plus
CG18418-PA	311	CG18418-PA	17..297	332..607	267	27.4	Plus
CG7514-PA	301	CG7514-PA	19..288	336..607	250	28.5	Plus
CG1628-PC	305	CG1628-PC	10..299	324..605	246	27.5	Plus
Ucp4B-PA	337	CG18340-PA	41..330	335..605	246	31	Plus
CG1628-PB	459	CG1628-PB	164..453	324..605	246	27.5	Plus
CG18324-PB	307	CG18324-PB	6..296	333..606	245	29.4	Plus
CG8026-PD	322	CG8026-PD	29..300	336..601	245	28.5	Plus
CG8323-PA	303	CG8323-PA	6..293	333..603	240	30.2	Plus
DPCoAC-PE	290	CG4241-PE	4..276	336..604	239	28.2	Plus
DPCoAC-PB	290	CG4241-PB	4..276	336..604	239	28.2	Plus
CG1907-PA	317	CG1907-PA	14..300	326..606	239	27.7	Plus
DPCoAC-PF	365	CG4241-PF	79..351	336..604	239	28.2	Plus
DPCoAC-PC	365	CG4241-PC	79..351	336..604	239	28.2	Plus
DPCoAC-PA	365	CG4241-PA	79..351	336..604	239	28.2	Plus
CG4743-PA	297	CG4743-PA	22..269	324..586	227	27.8	Plus
CG8026-PB	304	CG8026-PB	29..302	336..603	226	26.6	Plus
CG18327-PB	304	CG18327-PB	6..293	333..603	226	27.1	Plus
CG18327-PA	304	CG18327-PA	6..293	333..603	226	27.1	Plus
DPCoAC-PD	364	CG4241-PD	79..350	336..604	225	28.2	Plus
DPCoAC-PE	290	CG4241-PE	1..229	432..647	223	28.1	Plus
DPCoAC-PB	290	CG4241-PB	1..229	432..647	223	28.1	Plus
DPCoAC-PF	365	CG4241-PF	76..304	432..647	223	28.1	Plus
DPCoAC-PC	365	CG4241-PC	76..304	432..647	223	28.1	Plus
DPCoAC-PA	365	CG4241-PA	76..304	432..647	223	28.1	Plus
DPCoAC-PD	364	CG4241-PD	76..303	432..647	220	28.6	Plus
CG5254-PB	237	CG5254-PB	3..226	383..601	218	28.6	Plus
Tpc1-PA	332	CG6608-PA	27..330	328..606	218	26.6	Plus
Tpc1-PB	332	CG6608-PB	27..330	328..606	218	26.6	Plus
Tpc1-PA	332	CG6608-PA	127..328	318..508	185	26.4	Plus
Tpc1-PB	332	CG6608-PB	127..328	318..508	185	26.4	Plus
CG18327-PB	304	CG18327-PB	4..269	430..663	181	25.6	Plus
CG18327-PA	304	CG18327-PA	4..269	430..663	181	25.6	Plus
Bmcp-PB	303	CG7314-PB	2..202	424..612	178	27	Plus
Bmcp-PA	303	CG7314-PA	2..202	424..612	178	27	Plus
CG1907-PA	317	CG1907-PA	11..238	422..641	174	27	Plus
CG8323-PA	303	CG8323-PA	4..244	430..644	173	27	Plus
CG18418-PA	311	CG18418-PA	8..231	422..641	169	24.6	Plus
Ucp4B-PA	337	CG18340-PA	29..236	419..611	166	29.6	Plus
CG2616-PB	449	CG2616-PB	209..434	295..524	162	27	Plus
CG2616-PA	449	CG2616-PA	209..434	295..524	162	27	Plus
sea-PE	317	CG6782-PE	37..220	432..610	158	27.7	Plus
sea-PD	317	CG6782-PD	37..220	432..610	158	27.7	Plus
sea-PC	317	CG6782-PC	37..220	432..610	158	27.7	Plus
sea-PA	317	CG6782-PA	37..220	432..610	158	27.7	Plus
CG1628-PC	305	CG1628-PC	120..302	336..512	157	27.2	Plus
CG1628-PB	459	CG1628-PB	274..456	336..512	157	27.2	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:43:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI22760-PA	695	GI22760-PA	23..681	10..669	3084	86.1	Plus
Dmoj\GI23551-PA	327	GI23551-PA	43..315	345..602	535	42.3	Plus
Dmoj\GI17471-PA	296	GI17471-PA	16..294	333..607	301	30.7	Plus
Dmoj\GI21513-PA	310	GI21513-PA	15..305	320..603	296	31.2	Plus
Dmoj\GI17472-PA	310	GI17472-PA	6..303	312..607	288	30.2	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:43:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL14047-PA	689	GL14047-PA	15..676	2..669	3238	90.1	Plus
Dper\GL22256-PA	321	GL22256-PA	28..309	336..602	565	43.1	Plus
Dper\GL22257-PA	312	GL22257-PA	28..300	345..602	537	42.7	Plus
Dper\GL22258-PA	315	GL22258-PA	28..298	345..600	518	42.6	Plus
Dper\GL21377-PA	310	GL21377-PA	12..299	316..601	302	31.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:43:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA15263-PA	689	GA15263-PA	15..676	2..669	3240	90.3	Plus
Dpse\GA14898-PA	321	GA14898-PA	28..309	336..602	565	43.1	Plus
Dpse\GA27431-PA	315	GA27431-PA	28..298	345..600	522	43	Plus
Dpse\GA27089-PA	303	GA27089-PA	26..298	336..607	303	28.9	Plus
Dpse\GA18765-PA	310	GA18765-PA	12..299	316..601	299	31.4	Plus
Dpse\GA27089-PA	303	GA27089-PA	23..184	432..588	162	30.7	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:43:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM12154-PA	682	GM12154-PA	1..682	1..682	3623	99.3	Plus
Dsec\GM23990-PA	321	GM23990-PA	37..309	345..602	533	41.6	Plus
Dsec\GM23991-PA	325	GM23991-PA	33..310	336..602	502	40.1	Plus
Dsec\GM19087-PA	306	GM19087-PA	9..295	316..601	309	30.8	Plus
Dsec\GM18148-PA	399	GM18148-PA	44..296	333..591	293	29.9	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:43:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD17068-PA	669	GD17068-PA	1..468	1..468	2489	99.6	Plus
Dsim\GD18793-PA	321	GD18793-PA	37..309	345..602	534	41.6	Plus
Dsim\GD16525-PA	306	GD16525-PA	9..295	316..601	309	30.8	Plus
Dsim\GD23676-PA	399	GD23676-PA	44..296	333..591	293	29.9	Plus
Dsim\GD20656-PA	317	GD20656-PA	40..312	336..607	287	28.6	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:43:36

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ22761-PA	695	GJ22761-PA	1..681	1..669	3099	84.6	Plus
Dvir\GJ23512-PA	306	GJ23512-PA	25..289	345..600	532	42.1	Plus
Dvir\GJ23511-PA	326	GJ23511-PA	42..314	345..602	530	42	Plus
Dvir\GJ19052-PA	311	GJ19052-PA	7..300	319..601	303	29.6	Plus
Dvir\GJ15411-PA	363	GJ15411-PA	5..257	333..591	298	31.8	Plus
Dvir\GJ15411-PA	363	GJ15411-PA	4..180	431..606	162	28.6	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:43:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK13128-PA	679	GK13128-PA	1..665	1..669	3292	91.3	Plus
Dwil\GK11426-PA	324	GK11426-PA	40..312	345..602	529	42	Plus
Dwil\GK11427-PA	314	GK11427-PA	27..299	345..602	465	41.2	Plus
Dwil\GK23706-PA	298	GK23706-PA	18..287	336..601	308	30.4	Plus
Dwil\GK16434-PA	305	GK16434-PA	17..294	331..601	291	30	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:43:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE23386-PA	682	GE23386-PA	1..682	1..682	3615	98.8	Plus
Dyak\GE26151-PA	321	GE26151-PA	37..309	345..602	536	42	Plus
Dyak\GE26153-PA	314	GE26153-PA	22..299	336..602	492	42.2	Plus
Dyak\GE16633-PA	306	GE16633-PA	9..295	316..601	307	30.5	Plus
Dyak\GE10109-PA	317	GE10109-PA	52..312	348..607	286	30.2	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	354
Well:	41
Vector:	pOT2
Associated Gene/Transcript	aralar1-RA
Protein status:	LD35441.pep: gold
Preliminary Size:	2625
Sequenced Size:	2325

Clone LD35441 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD35441.complete Sequence

LD35441.complete Blast Records

LD35441.complete Sim4 Records

LD35441.hyp Sequence

LD35441.hyp Blast Records

LD35441.pep Sequence

LD35441.pep Blast Records