BDGP Sequence Production Resources |
Search the DGRC for LD35624
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 356 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | feo-RA |
Protein status: | LD35624.pep: gold |
Sequenced Size: | 2449 |
Gene | Date | Evidence |
---|---|---|
feo | 2008-04-29 | Picked prior to 5.5 |
feo | 2008-08-15 | Release 5.9 accounting |
feo | 2008-12-18 | 5.12 accounting |
2449 bp assembled on 2008-05-16
GenBank Submission: BT032843
> LD35624.complete CATCGATTCATTCAGTTCGAAATTTCGTGCAGTGATGCACTCTAAATAAA CCACTAAATAAATCCGCACATTCCCGAGCAATCCTGCCCAGCGTTGTGGG TCTGCGACACAACTGTCAAGTTAACTCAGATATGCTGGTTAAATAGTCCC CAAGTGAACACAACGAAAAAACAAAGCCAGTGAGCATTTACGCAAGAAAA GAAATTTTGAACAAAAAAAAAAAAACACAAATTTCACAACGAAAACGGAG AAAATGAACTCGCCGAGCGCCATTGCGGTGAAGGCCCAGATCCTGGAGAT GACGGGCGAGCACGTGGATCAGTTGCACGCGATGTGGTCGCAGTTGTTCG AGGTCAAGACCTGCGGTGAGTTCCTCCTCCGGTTGAAGGACCATGCGAAC AGCTTCTTCACGGATTTGCTCAATGAGTCGCGCGAAAAGCAGCAGGCGAT CCTCAACGATATAGCCGCCTTGCGGGCAGAGGCCACCGACTTGACGCGCC TACTCCACGAGCCGCTGGACATTGGCGAGCGGCCGGAGTCCATGCCGCTG GTCGTCTGGGAGCTGAAGCTGGACAAAAGCATCGAGCACTTACGCGATCA GCTGGCCAGGCGGCGAGCGGAGATCTGTGAGCTTCTGCTGCAGCAGGAGC AGCTGTGCGAGGAACTGGGAGAGCTGCCTCTGCCACTGTTGGCGGATCCA CTGCCGCTGCCCGAGGAGATGGACGCCTTTCGGAATCGCCTGGGCCAGCT ACGCGATCAGCGAGTGCTGCGCCTCAAAGAGATGGACCAGCTGCGCCAGG CCATTAAGCACGACATGAAGCTGCTTGAGTGCCTGCCCCAGACGGACACC GAGGAGCGTCTGCTCAACCAGGTGGATCACTGCCTAACGCCGGAGACCTT CGAGCTCCTGCGCAACATGCAAAAGAACTTCGCCGACCAGGTGAAGGAGC TGAGGGAGCGCATCGACGATATGCGCGAAAAGATCCATGTGCTGTGGGAC AGACTCCAGGAGACAGACGAGTATGCCATGCGTCGCGTGCGCGAGGCTAC GACCTACACTCAACGCACCTACGATGTCCTGCGGGAGGAACTGCAGCGCT GCCAGGCCCTGCGACGCCAGAATCTGAAAACCTTCATCGAGCAGCTACGC ATCGAGATCAAGGAGATGTGGGATCTCACACTTAAGAGCCAGCAGGAGCG CAAGCGCTTCTCGAACTACTACAACGACTGGTACAACGAAGATCTGCTGG AGCTCCACGAACTTGAGCTGGACGACCTCAAGACCTTCTACAACAAGAAC AAGGAGATCTTCGATCTGTACGAAAGCCGTGCCGAACTCTGGTCGCGCAT GGAGGCGCTGGAGGCCAAGGCGAGCGAGCCGAATCGCTTCAACAATCGTG GCGGCCAGTTGCTCAAGGAGGAGAAGGAGCGCAAGGCCATCACCTCCAAG CTGCCCAAGATTGAGCAGCAGATCACGGAACTGGTGCAGGCATACGAGGC GCAGGAGAACACACCCTTTCTGGTGCACGGCGAGAACATCCTGGAGCGGA TGGCCGCCGATTGGGAGCGTCATCGCCAGGCCAAACAGCAGAGCTCGGCG CGCAAGAAGGCACCGCCATCGGCCAGCAAGATAATGCCACCGCCGGCAAC GGGCTCGACAGCTCCACGCACGCCGCGCACGCTGCGCAACATGTCGACCC TTTCCAGCTCCACCATGTCGCTGCGCAAGACGCCGTCGCAGCAGCACCTC CGTCCACTAAACATCACCAAGAGTACGGGCAATCTGCACAAGCGCCTGAA TCCGTCCGGCCTGCAGACGGGCCCCAAAACGCCCAACGCCAAGCGCAGCC TTATGAACACACTCAACTCGATGAAGGCGTCGCCAGCCAAGCACCTGCTC GCGCCCAGCCAGCAGCATAACCAGCTGAAGAGCACCAAGTCGCCGCTGAA ACGTGTTCGCGTACTGGACAACACACTGCGACGCAGCGGCGGTATGGGCA GGCGCAGCATTGGAACGCGTTCCAGCAAGAAGGCGCGCACCAAGTCCAAC GATCAGAACGCCCCACCCGACAGCAGTGACTACACAACGGACGAGAATCC CGAGCAGGGTGTCAGCTATGACGAATTTCAGCCGACCAGTCGCTCCTCGA TGCTGCCGCGCCAGCGTCATCAATTGGCCGTGCCGCGAACTCGTCGTGCG GAAATGAATGCCAATCTGCCGGTGCCGCGGGAAAGCCTGATGATCGTGCA GCCGCGCAGACAGTTCTAGTTCCACTGGAGATTGACTAGCTTAACGCGTA CCTACTACACTATTTCATAACAGTTGGAGTTTCTTGATGTATTTTAATTT TTTATTTTCTGTTTTACGTTTTCAGAATAAAATTTATGTGAGTTTTTTCG CTTGACCACAAGAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
feo-RA | 2430 | feo-RA | 18..2430 | 1..2413 | 12065 | 100 | Plus |
sofe-RA | 2242 | sofe-RA | 253..648 | 404..799 | 570 | 76.2 | Plus |
sofe-RA | 2242 | sofe-RA | 1114..1339 | 1265..1490 | 470 | 80.5 | Plus |
sofe-RA | 2242 | sofe-RA | 861..1071 | 1012..1222 | 395 | 79.1 | Plus |
sofe-RA | 2242 | sofe-RA | 1358..1459 | 1509..1610 | 180 | 78.4 | Plus |
sofe-RA | 2242 | sofe-RA | 778..833 | 929..984 | 145 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10860543..10862955 | 2413..1 | 12065 | 100 | Minus |
X | 23527363 | X | 10864142..10864367 | 1490..1265 | 470 | 80.5 | Minus |
X | 23527363 | X | 10864833..10865066 | 799..566 | 435 | 79 | Minus |
X | 23527363 | X | 10864410..10864620 | 1222..1012 | 395 | 79.1 | Minus |
X | 23527363 | X | 10865095..10865228 | 537..404 | 190 | 76.1 | Minus |
X | 23527363 | X | 10864022..10864123 | 1610..1509 | 180 | 78.4 | Minus |
X | 23527363 | X | 10864648..10864703 | 984..929 | 145 | 83.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10743747..10746159 | 1..2413 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 1..2016 | 254..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 1..2016 | 254..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 1..2016 | 254..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 1..2016 | 254..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 1..2016 | 254..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 18..2430 | 1..2413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 18..2430 | 1..2413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 13..2424 | 1..2412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 18..2430 | 1..2413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
feo-RA | 13..2424 | 1..2412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10852445..10854857 | 1..2413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10852445..10854857 | 1..2413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10852445..10854857 | 1..2413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10746478..10748890 | 1..2413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10860543..10862955 | 1..2413 | 100 | Minus |
Translation from 253 to 2268
> LD35624.pep MNSPSAIAVKAQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKDHANS FFTDLLNESREKQQAILNDIAALRAEATDLTRLLHEPLDIGERPESMPLV VWELKLDKSIEHLRDQLARRRAEICELLLQQEQLCEELGELPLPLLADPL PLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTE ERLLNQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDR LQETDEYAMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRI EIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLELHELELDDLKTFYNKNK EIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLLKEEKERKAITSKL PKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHRQAKQQSSAR KKAPPSASKIMPPPATGSTAPRTPRTLRNMSTLSSSTMSLRKTPSQQHLR PLNITKSTGNLHKRLNPSGLQTGPKTPNAKRSLMNTLNSMKASPAKHLLA PSQQHNQLKSTKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSKKARTKSND QNAPPDSSDYTTDENPEQGVSYDEFQPTSRSSMLPRQRHQLAVPRTRRAE MNANLPVPRESLMIVQPRRQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20260-PA | 681 | GF20260-PA | 4..681 | 1..671 | 2631 | 81.8 | Plus |
Dana\GF20258-PA | 611 | GF20258-PA | 7..602 | 10..615 | 1706 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18896-PA | 655 | GG18896-PA | 1..655 | 1..661 | 2972 | 91.4 | Plus |
Dere\GG18895-PA | 610 | GG18895-PA | 7..579 | 10..595 | 1699 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24191-PA | 638 | GH24191-PA | 5..635 | 9..638 | 1616 | 60.2 | Plus |
Dgri\GH24767-PA | 633 | GH24767-PA | 1..605 | 31..637 | 1520 | 59.7 | Plus |
Dgri\GH23324-PA | 346 | GH23324-PA | 68..331 | 215..476 | 401 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
feo-PA | 671 | CG11207-PA | 1..671 | 1..671 | 3450 | 100 | Plus |
sofe-PB | 607 | CG1655-PB | 7..601 | 10..618 | 1698 | 57 | Plus |
sofe-PA | 607 | CG1655-PA | 7..601 | 10..618 | 1698 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15801-PA | 703 | GI15801-PA | 7..696 | 9..663 | 1717 | 59.1 | Plus |
Dmoj\GI14829-PA | 549 | GI14829-PA | 16..474 | 39..495 | 494 | 29.7 | Plus |
Dmoj\GI13637-PA | 365 | GI13637-PA | 64..347 | 206..489 | 485 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14295-PA | 681 | GL14295-PA | 6..681 | 8..668 | 2070 | 66.1 | Plus |
Dper\GL12872-PA | 661 | GL12872-PA | 1..661 | 1..671 | 1924 | 61 | Plus |
Dper\GL21681-PA | 629 | GL21681-PA | 1..517 | 1..511 | 1533 | 62.9 | Plus |
Dper\GL21682-PA | 629 | GL21682-PA | 1..517 | 1..511 | 1533 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10841-PA | 706 | GA10841-PA | 6..706 | 8..668 | 2215 | 68.8 | Plus |
Dpse\GA22612-PA | 644 | GA22612-PA | 1..603 | 1..654 | 1818 | 62 | Plus |
Dpse\GA26369-PA | 604 | GA26369-PA | 1..516 | 1..511 | 1514 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11282-PA | 671 | GM11282-PA | 1..671 | 1..671 | 3487 | 97.8 | Plus |
Dsec\GM11280-PA | 614 | GM11280-PA | 1..606 | 1..621 | 1596 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18655-PA | 690 | GJ18655-PA | 6..638 | 8..636 | 1856 | 65.5 | Plus |
Dvir\GJ19495-PA | 663 | GJ19495-PA | 7..649 | 10..637 | 1791 | 63.1 | Plus |
Dvir\GJ13975-PA | 364 | GJ13975-PA | 64..345 | 206..489 | 546 | 44.1 | Plus |
Translation from 253 to 2268
> LD35624.hyp MNSPSAIAVKAQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKDHANS FFTDLLNESREKQQAILNDIAALRAEATDLTRLLHEPLDIGERPESMPLV VWELKLDKSIEHLRDQLARRRAEICELLLQQEQLCEELGELPLPLLADPL PLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTE ERLLNQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDR LQETDEYAMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRI EIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLELHELELDDLKTFYNKNK EIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLLKEEKERKAITSKL PKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHRQAKQQSSAR KKAPPSASKIMPPPATGSTAPRTPRTLRNMSTLSSSTMSLRKTPSQQHLR PLNITKSTGNLHKRLNPSGLQTGPKTPNAKRSLMNTLNSMKASPAKHLLA PSQQHNQLKSTKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSKKARTKSND QNAPPDSSDYTTDENPEQGVSYDEFQPTSRSSMLPRQRHQLAVPRTRRAE MNANLPVPRESLMIVQPRRQF*