BDGP Sequence Production Resources |
Search the DGRC for LD35784
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 357 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | dup-RA |
Protein status: | LD35784.pep: gold |
Preliminary Size: | 2699 |
Sequenced Size: | 3119 |
Gene | Date | Evidence |
---|---|---|
CG8171 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8171 | 2002-06-04 | Blastp of sequenced clone |
CG8171 | 2003-01-01 | Sim4 clustering to Release 3 |
dup | 2008-04-29 | Release 5.5 accounting |
dup | 2008-08-15 | Release 5.9 accounting |
dup | 2008-12-18 | 5.12 accounting |
3119 bp (3119 high quality bases) assembled on 2002-06-04
GenBank Submission: AY118555
> LD35784.complete CCGCTTGGAAATTTTGCTCGCCGTTTGCTTTCTCAAAGGCTCAAAAAAAT GCAGCTACCACCGACTTACCTGGCTTCGCAAGTGAACGCGAACTAAGCCA ATAGCATCTCGATTCGCCGGCGTTGCGCAGCGTTCGCAAATGCAGCTGAA ACGAGCAAAAAACACGCGCACAACGAAAAATCCGCAAGTGGAAAAAACTG CTACGGAAAAATCAACTCTGCCAGCAAACAGTGTTGCAAATCGATGGAGT TAAACAGCTGAGTGGTTAGTGTTGACTGACAGCCGAGTACGGCAACTTAC AACACTGTAGGCGTTTTGGCGCGATTTTAGGTTTTGGAGGGAAACTGCAT CTAGTGAAAAATCGTGGCCAGTTGTAATTCGAGCAGTGCGCTGGCACGAC GTGGTGATAAAAAAGGAAAACTAATAGAATTATACTGACTAGTGATAATT AACCGGACGTGCCCATCTGTTAATTCAGCCAAGTGGTATCTTTACAACCG TTTAGCCAACAACCAAATTGCTATCAGAAATATATATTATACACACTTAC TATGGCCCAGCCATCGGTAGCTGCATTTTTCACAAACCGCAAACGCGCCG CCTTGGATGATGCTATCAGTATCAAGAACAGGCGTTTGGTGGAACCCGCT GAAACCGTCTCTCCTGCCTCCGCCCCTTCCCAGTTGCCAGCCGGCGACCA GGATGCGGATCTAGACACCCTGAAGGCGGCGGCCACGGGCATGCGTACCC GATCCGGACGCACTGCCCGACTAATTGTCACCGCCGCTCAAGAGAGCAAA AAGAAGACACCGGCTGCCGCCAAGATGGAGCCACACATCAAGCAGCCCAA GCTGGTGCAATTCATTAAAAAGGGCACTCTGTCGCCCAGGAAACAGGCTC AGTCCAGTAAGCTGGACGAGGAGGAGCTGCAGCAGTCGTCGGCCATAAGC GAGCACACGCCCAAGGTTAACTTCACCATCACAAGCCAGCAGAATGCGGA CAATGTGCAGCGTGGCCTGCGCACACCCACCAAGCAGATCCTCAAGGATG CCTCGCCGATCAAGGCGGATCTCCGCCGTCAGCTCACTTTCGACGAGGTA AAAACGAAGGTATCGCGGAGTGCCAAGCTGCAGGAACTCAAGGCAGTGCT GGCCCTTAAGGCGGCGCTCGAGCAGAAGCGCAAGGAGCAGGAGGAGCGCA ACAGGAAACTCCGCGACGCTGGCCCCTCCCCATCGAAGTCCAAGATGAGC GTGCAGCTCAAGGAATTCGACACAATCGAACTGGAGGTGCTTATAAGCCC TTTGAAGACCTTCAAGACTCCCACAAAAATACCGCCACCCACCCCGGACA AACATGAGCTTATGTCGCCGCGTCACACTGACGTCTCCAAGCGCCTTCTC TTCAGTCCGGCCAAAAATGGATCTCCTGTCAAATTGGTGGAGGTGCCGGC TTATAAGCGCTACGCCAGTCTGGTGGAAAGCAGCCGCGCCGGCCAACTTC CATTGCCTTATAAGTACCGACACCTGTTGGACGTGTTCAAGGGTCTCGAT TCCGTGGTGGCCATGTTTCACAACCGCAAGGAGACCATCACATTCAAGAA GCTTAAGCCGGCAGTGCAGCGCATGCTCCGGAAGAACTTCACTGAGACCC ATTTGGCCCAGATCAAGCACATCTATCCAGACGCATTTATCTTCAGTCAG GTGAAGACGCGCAATTTCGGTTCTGTCTCCAAAGCGGACTATTTCCAGCT GATCATCGCTCCCAATGTGGAGCCACTGCCCGAGCAACAGCAATCGGAGA AGCCACAACATTTCACCAAGATCAACGAAGACGATGTGCTCGCGTCGGCC CAGTCGACGTCCATGAATCCACACGTTATGACGGCGCGCATGCAGCGCTT TCAGAGCCTTCTGCTCGATCGGGCAATGCGGGCGCACGACCAGTTCCTTC GCTCCCAGGATCCGCCGATCATCATCGAAAAGGCGCTGACTCGCTGGCAT CCGCAGTTTGATTTGGAGAGTTGTCCGGAAGTGGAGCTGTCCCCTTTGCC GCAGCCGCCCAATGTCGAGAAATACTCGTCAGCTAAGGATATTCTGTCTA CCGCTCGAAATCTCTTCAATTGCGCCACGCCCATGGAGAGAGCAATGGAT CGCTATGAGGCCAAGTTGGAGTCGGAAAAACAGCAAGCAGCTGAAAGCAA TAAAAAGACGGAGGAACAGCAGGCAGGAGAAGTTACCAGGACAAGTACAG CGATTCAAACCAGTCAGGAGGTGCCTGGAATATCTGGATCATCGAAAAAC CCAACTGTCCCTGAAACAACAAACCAAACAGAAACTGCCAAGCCCACCGT GAAGGATTGCACAGTGCCAGATGCCAGCTCCAATCTACTGAAGGGACTGC CAAAATCACTGATCGAGAAAATTCGAGCCAAACAGGCAGCAAAGGCTTTG GAGGCGATGACTCGACGTCCTTCGCAGGACCAGGAGGCCACGAAGTACTC ACGTTTGCCCGAATTGGCCAGACACCTGCGCAATGTCTTCGTTACCGAGC GTAAAGGAGTGCTCACCCTGGAAGTAATCATCAAGAAGATCCAGAACAGC TTCCGGGCGAACCTCACACCGCAGGAAATTGAGGCGCATCTGAAACTACT TGCCAAGGAGCTACCCAGCTGGGCTTCCTTTCATGAAGTGCGCAAGACCA TGTACCTCAAGGTTGCCAAGGACATGGACATGAACAAGATCATCGAGAAG CTGGAGAGCGTGGCTAACGCCAAGAGCAATTAGACCGGAAACACGGAAAC GCAACCAGGACGCGGGACTCCGTCGAGCAATGACCCTGTGGCTATATCCA GATATATGTTTAAGTACTTGTCAAACTCGCTGGCCATTACTTGATTAAAC AACCGGATTAGGCTAACCATCTTGACATTTCCACATTCAACAAGCACCTT GACAACCAGGATTGGATTCATCACATTTACCCAAGCAATCATTATCATTA TATGTGTAATTTTTGGACCAAACGTTTATACATTCATATTTATTAGTTTT AAGACCATTTTCATGTTGTACCACGTTGAATAAATAAATATTTTTCCTGG AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11263777..11265575 | 3100..1296 | 8750 | 99.1 | Minus |
chr2R | 21145070 | chr2R | 11266709..11267374 | 1297..632 | 3315 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 11267471..11268102 | 632..1 | 3160 | 100 | Minus |
chr2R | 21145070 | chr2R | 11261086..11261190 | 3100..2994 | 285 | 88.8 | Minus |
chr2R | 21145070 | chr2R | 11261254..11261325 | 2105..2034 | 240 | 88.9 | Minus |
chr2R | 21145070 | chr2R | 11262212..11262283 | 2105..2034 | 210 | 86.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15376609..15378423 | 3110..1296 | 9045 | 99.9 | Minus |
2R | 25286936 | 2R | 15379557..15380222 | 1297..632 | 3330 | 100 | Minus |
2R | 25286936 | 2R | 15380319..15380950 | 632..1 | 3160 | 100 | Minus |
2R | 25286936 | 2R | 15373894..15374001 | 3103..2994 | 300 | 89.1 | Minus |
2R | 25286936 | 2R | 15375035..15375106 | 2105..2034 | 225 | 87.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15377808..15379622 | 3110..1296 | 9045 | 99.8 | Minus |
2R | 25260384 | 2R | 15380756..15381421 | 1297..632 | 3330 | 100 | Minus |
2R | 25260384 | 2R | 15381518..15382149 | 632..1 | 3160 | 100 | Minus |
2R | 25260384 | 2R | 15375093..15375200 | 3103..2994 | 320 | 89 | Minus |
2R | 25260384 | 2R | 15376234..15376305 | 2105..2034 | 225 | 87.5 | Minus |
2R | 25260384 | 2R | 15375266..15375339 | 2105..2034 | 195 | 86.4 | Minus |
2R | 25260384 | 2R | 15376297..15376337 | 2026..1986 | 175 | 95.1 | Minus |
2R | 25260384 | 2R | 15375331..15375371 | 2026..1986 | 160 | 92.6 | Minus |
2R | 25260384 | 2R | 15376118..15376197 | 2992..2913 | 160 | 80 | Minus |
2R | 25260384 | 2R | 15376049..15376089 | 3103..3063 | 145 | 90.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11263777..11265573 | 1298..3100 | 99 | <- | Minus |
chr2R | 11266709..11267373 | 633..1297 | 99 | <- | Minus |
chr2R | 11267471..11268102 | 1..632 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 1..2232 | 552..2783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 1..2232 | 552..2783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 1..2232 | 552..2783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 1..2232 | 552..2783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 1..2232 | 552..2783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 11..3110 | 1..3100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 11..3110 | 1..3100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 39..3138 | 1..3100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 11..3110 | 1..3100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dup-RA | 39..3138 | 1..3100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15376619..15378421 | 1298..3100 | 100 | <- | Minus |
2R | 15379557..15380221 | 633..1297 | 100 | <- | Minus |
2R | 15380319..15380950 | 1..632 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15376619..15378421 | 1298..3100 | 100 | <- | Minus |
2R | 15379557..15380221 | 633..1297 | 100 | <- | Minus |
2R | 15380319..15380950 | 1..632 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15376619..15378421 | 1298..3100 | 100 | <- | Minus |
2R | 15379557..15380221 | 633..1297 | 100 | <- | Minus |
2R | 15380319..15380950 | 1..632 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11264124..11265926 | 1298..3100 | 100 | <- | Minus |
arm_2R | 11267062..11267726 | 633..1297 | 100 | <- | Minus |
arm_2R | 11267824..11268455 | 1..632 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15377818..15379620 | 1298..3100 | 100 | <- | Minus |
2R | 15380756..15381420 | 633..1297 | 100 | <- | Minus |
2R | 15381518..15382149 | 1..632 | 100 | Minus |
Translation from 551 to 2782
> LD35784.hyp MAQPSVAAFFTNRKRAALDDAISIKNRRLVEPAETVSPASAPSQLPAGDQ DADLDTLKAAATGMRTRSGRTARLIVTAAQESKKKTPAAAKMEPHIKQPK LVQFIKKGTLSPRKQAQSSKLDEEELQQSSAISEHTPKVNFTITSQQNAD NVQRGLRTPTKQILKDASPIKADLRRQLTFDEVKTKVSRSAKLQELKAVL ALKAALEQKRKEQEERNRKLRDAGPSPSKSKMSVQLKEFDTIELEVLISP LKTFKTPTKIPPPTPDKHELMSPRHTDVSKRLLFSPAKNGSPVKLVEVPA YKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKK LKPAVQRMLRKNFTETHLAQIKHIYPDAFIFSQVKTRNFGSVSKADYFQL IIAPNVEPLPEQQQSEKPQHFTKINEDDVLASAQSTSMNPHVMTARMQRF QSLLLDRAMRAHDQFLRSQDPPIIIEKALTRWHPQFDLESCPEVELSPLP QPPNVEKYSSAKDILSTARNLFNCATPMERAMDRYEAKLESEKQQAAESN KKTEEQQAGEVTRTSTAIQTSQEVPGISGSSKNPTVPETTNQTETAKPTV KDCTVPDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYS RLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLL AKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKSN*
Translation from 551 to 2782
> LD35784.pep MAQPSVAAFFTNRKRAALDDAISIKNRRLVEPAETVSPASAPSQLPAGDQ DADLDTLKAAATGMRTRSGRTARLIVTAAQESKKKTPAAAKMEPHIKQPK LVQFIKKGTLSPRKQAQSSKLDEEELQQSSAISEHTPKVNFTITSQQNAD NVQRGLRTPTKQILKDASPIKADLRRQLTFDEVKTKVSRSAKLQELKAVL ALKAALEQKRKEQEERNRKLRDAGPSPSKSKMSVQLKEFDTIELEVLISP LKTFKTPTKIPPPTPDKHELMSPRHTDVSKRLLFSPAKNGSPVKLVEVPA YKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKK LKPAVQRMLRKNFTETHLAQIKHIYPDAFIFSQVKTRNFGSVSKADYFQL IIAPNVEPLPEQQQSEKPQHFTKINEDDVLASAQSTSMNPHVMTARMQRF QSLLLDRAMRAHDQFLRSQDPPIIIEKALTRWHPQFDLESCPEVELSPLP QPPNVEKYSSAKDILSTARNLFNCATPMERAMDRYEAKLESEKQQAAESN KKTEEQQAGEVTRTSTAIQTSQEVPGISGSSKNPTVPETTNQTETAKPTV KDCTVPDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYS RLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLL AKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11870-PA | 735 | GF11870-PA | 1..735 | 1..743 | 3066 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22355-PA | 742 | GG22355-PA | 1..742 | 1..743 | 3532 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21650-PA | 718 | GH21650-PA | 1..717 | 1..742 | 2644 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dup-PB | 743 | CG8171-PB | 1..743 | 1..743 | 3731 | 100 | Plus |
dup-PA | 743 | CG8171-PA | 1..743 | 1..743 | 3731 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20103-PA | 697 | GI20103-PA | 1..696 | 1..742 | 2711 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20043-PA | 730 | GL20043-PA | 1..729 | 1..742 | 2999 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20864-PA | 730 | GA20864-PA | 1..729 | 1..742 | 2995 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20140-PA | 744 | GM20140-PA | 1..744 | 1..743 | 3784 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25618-PA | 737 | GD25618-PA | 1..737 | 1..743 | 3615 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19871-PA | 721 | GJ19871-PA | 1..720 | 1..742 | 2716 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23207-PA | 721 | GK23207-PA | 1..720 | 1..742 | 2707 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\dup-PA | 743 | GE14156-PA | 1..743 | 1..743 | 3660 | 94.6 | Plus |