BDGP Sequence Production Resources |
Search the DGRC for LD35843
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 358 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8187-RA |
Protein status: | LD35843.pep: gold |
Preliminary Size: | 1753 |
Sequenced Size: | 1681 |
Gene | Date | Evidence |
---|---|---|
CG8187 | 2001-01-01 | Release 2 assignment |
CG8187 | 2001-10-10 | Blastp of sequenced clone |
CG8187 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8187 | 2008-04-29 | Release 5.5 accounting |
CG8187 | 2008-08-15 | Release 5.9 accounting |
CG8187 | 2008-12-18 | 5.12 accounting |
1681 bp (1681 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061426
> LD35843.complete TTTGCATTTAAAAGTAAACAAATCTAATAAATTCCATTTCTTTATTGGAT TTATAATGCTTCTGCAACGCGTGTGGTTGACACATTTAAACAACCATCTA CGCCAATACGCGAACAAGTCGCGAGCCCACATCAAACCAGCCATGGCCGT GAGCATGCGGATGGTCCATCAGGAGATCCTGCATTATGTAAACCCCTTTG CCAGGATCAACGTGAAGTCCGATGTTTTCCTGCGCATCCAGCCCGCGGAT GTGCATCAGTATACCAGCGGGGATGTGTTTATCGCCCAACTGGTTGGCGG CCATGTCAAGAACTCGAATGTCTCTCTCGATGTGAAGGTAACCGATGAGG ACAAGGTGGTCAATGTGGTGGTTAAACAACTGGCGGAGCAGCCCTCAAAG CTTGAATGCCATCTGCAAATACCTGTGCGTTCCGATGTCTCTGTGGACGC AAAAGGTAGTGTGCGAGTGGAAGGCATACAGAGTGAACTGCTGCAAGTCA AAGCAAAGGAAGGCATCCTTACCAAAAATATCAAGGCCACCCATATAAAC TTGTACAGTGAAAATGGCAACATCAATTGCCAGGGCACATTGCTGGGCAA GATTACCCAAATAGAGTCACAAAATGGGAACATTGCGATGGATAAGTTGC AAGGAGACAGCTTGAATTGTTCCACCAAAGCTGGCAGTATTGTAACCGAT TGTTGTTATGTGGAAAAGTCAAAGTTTCAGACACAAACTGGGCGTCTGGA GCTCAAGAATGTCCACAAAAGCAGCGAAGTGCACGTCCATCAGTCGTCGG ATCTCAATATGACTGGAGTACATGGCAATATTCAAATAACTACCAAAGGA GGAAATTTAAATGTCCAACTCTCTGAGCTAGTGGGGAGCAACAAAATCGA CGCCGAGAACTTATTAGAAGAGGCTATCATACACATTTCCCAAGCCATAG AGCAGAATCTTCACATCGAGGTAACAGCCCCCGAAGTGAAATTGGAAAAC GAACTGGAGCATGTAGCCCATGCTCTCAACGAGAGCAAGAACAAATTCGT GCTAAGCAATCCAAATACAAATCGACTGGAAGTAAGCAGCACAGGCGACA AGGGCGTGCGCCTGGGAAAACAGTCATGGAGCGATATGATGCGTAATAAG TTGAAGGCTACCGGCACCTTGGACGATTTACCTTAGGTAAAGACAGAGAC TAACTAAGTTAAGAATATATTGTGCTGCAAGCTACAATCTCAGTCATTTT TGCTTTATCCATCATGGAGGCATGTTGTTTAGGCTTGGCCCGACTCCTTA GCCACTTTATCCTTTAAGCATTCAAGTGCCCTTGAGAAAATGGCTTCTTC CTTTCCGGCTTTGAGTGCAGACACAAACAGTTGCACCTTTTCATCGCCAA TCTCTTGGAGATCCGAGTTTTCCGCTTTTATCACCATACATGCCAACAGG CGCAGCAACTTCAAGGCGTTCTCCACATACTGCTCCTTTGGAGCGTCATC CTCCTCCTCTTCGTCCTCTTCGAACTCATTGGCGTCGGGATCACTTCCCC CCGTGTAGTTGTCAATGTGCTGTTTAAGTCTATACCACAATTCCAAAAGA TTTAAGAAGGCCTCCTTGTGATAGAAGTACTTCAGGCGCTGCAAAAATAA ATATTTAAATAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11426704..11427553 | 1662..813 | 4250 | 100 | Minus |
chr2R | 21145070 | chr2R | 11427850..11428477 | 628..1 | 3125 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 11427607..11427791 | 812..628 | 910 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15539552..15540403 | 1664..813 | 4260 | 100 | Minus |
2R | 25286936 | 2R | 15540700..15541327 | 628..1 | 3140 | 100 | Minus |
2R | 25286936 | 2R | 15540457..15540641 | 812..628 | 925 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15540751..15541602 | 1664..813 | 4260 | 100 | Minus |
2R | 25260384 | 2R | 15541899..15542526 | 628..1 | 3140 | 100 | Minus |
2R | 25260384 | 2R | 15541656..15541840 | 812..628 | 925 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11426704..11427553 | 813..1662 | 100 | <- | Minus |
chr2R | 11427607..11427790 | 629..812 | 99 | <- | Minus |
chr2R | 11427850..11428477 | 1..628 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 1..1131 | 56..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 1..1131 | 56..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 1..1131 | 56..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 1..1131 | 56..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 1..1131 | 56..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 9..1670 | 1..1662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 9..1670 | 1..1662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 37..1698 | 1..1662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 9..1670 | 1..1662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8187-RA | 37..1698 | 1..1662 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15539554..15540403 | 813..1662 | 100 | <- | Minus |
2R | 15540457..15540640 | 629..812 | 100 | <- | Minus |
2R | 15540700..15541327 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15539554..15540403 | 813..1662 | 100 | <- | Minus |
2R | 15540457..15540640 | 629..812 | 100 | <- | Minus |
2R | 15540700..15541327 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15539554..15540403 | 813..1662 | 100 | <- | Minus |
2R | 15540457..15540640 | 629..812 | 100 | <- | Minus |
2R | 15540700..15541327 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11427059..11427908 | 813..1662 | 100 | <- | Minus |
arm_2R | 11427962..11428145 | 629..812 | 100 | <- | Minus |
arm_2R | 11428205..11428832 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15540753..15541602 | 813..1662 | 100 | <- | Minus |
2R | 15541656..15541839 | 629..812 | 100 | <- | Minus |
2R | 15541899..15542526 | 1..628 | 100 | Minus |
Translation from 0 to 1185
> LD35843.hyp LHLKVNKSNKFHFFIGFIMLLQRVWLTHLNNHLRQYANKSRAHIKPAMAV SMRMVHQEILHYVNPFARINVKSDVFLRIQPADVHQYTSGDVFIAQLVGG HVKNSNVSLDVKVTDEDKVVNVVVKQLAEQPSKLECHLQIPVRSDVSVDA KGSVRVEGIQSELLQVKAKEGILTKNIKATHINLYSENGNINCQGTLLGK ITQIESQNGNIAMDKLQGDSLNCSTKAGSIVTDCCYVEKSKFQTQTGRLE LKNVHKSSEVHVHQSSDLNMTGVHGNIQITTKGGNLNVQLSELVGSNKID AENLLEEAIIHISQAIEQNLHIEVTAPEVKLENELEHVAHALNESKNKFV LSNPNTNRLEVSSTGDKGVRLGKQSWSDMMRNKLKATGTLDDLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8187-PA | 376 | CG8187-PA | 1..376 | 19..394 | 1915 | 100 | Plus |
Translation from 55 to 1185
> LD35843.pep MLLQRVWLTHLNNHLRQYANKSRAHIKPAMAVSMRMVHQEILHYVNPFAR INVKSDVFLRIQPADVHQYTSGDVFIAQLVGGHVKNSNVSLDVKVTDEDK VVNVVVKQLAEQPSKLECHLQIPVRSDVSVDAKGSVRVEGIQSELLQVKA KEGILTKNIKATHINLYSENGNINCQGTLLGKITQIESQNGNIAMDKLQG DSLNCSTKAGSIVTDCCYVEKSKFQTQTGRLELKNVHKSSEVHVHQSSDL NMTGVHGNIQITTKGGNLNVQLSELVGSNKIDAENLLEEAIIHISQAIEQ NLHIEVTAPEVKLENELEHVAHALNESKNKFVLSNPNTNRLEVSSTGDKG VRLGKQSWSDMMRNKLKATGTLDDLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13727-PA | 374 | GF13727-PA | 1..371 | 1..371 | 1486 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22348-PA | 375 | GG22348-PA | 1..374 | 1..376 | 1786 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21917-PA | 342 | GH21917-PA | 1..336 | 30..366 | 1013 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8187-PA | 376 | CG8187-PA | 1..376 | 1..376 | 1915 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19267-PA | 340 | GI19267-PA | 1..338 | 30..368 | 1135 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20036-PA | 378 | GL20036-PA | 2..374 | 1..371 | 1306 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20879-PA | 378 | GA20879-PA | 2..374 | 1..371 | 1310 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20136-PA | 372 | GM20136-PA | 1..372 | 1..376 | 1869 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25613-PA | 182 | GD25613-PA | 1..182 | 195..376 | 937 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22143-PA | 312 | GJ22143-PA | 1..307 | 30..367 | 941 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23203-PA | 347 | GK23203-PA | 7..339 | 36..368 | 1159 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14149-PA | 374 | GE14149-PA | 1..374 | 1..376 | 1746 | 90.4 | Plus |