BDGP Sequence Production Resources |
Search the DGRC for LD35885
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 358 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | Jheh3-RA |
Protein status: | LD35885.pep: gold |
Preliminary Size: | 1737 |
Sequenced Size: | 1574 |
Gene | Date | Evidence |
---|---|---|
CG15106 | 2001-01-01 | Release 2 assignment |
CG15106 | 2001-10-10 | Blastp of sequenced clone |
CG15106 | 2003-01-01 | Sim4 clustering to Release 3 |
Jheh3 | 2008-04-29 | Release 5.5 accounting |
Jheh3 | 2008-08-15 | Release 5.9 accounting |
Jheh3 | 2008-12-18 | 5.12 accounting |
1574 bp (1574 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061427
> LD35885.complete TTGCACGGTCGTGTTTATTCCGAATTCGGGTTAGGAATCACAAACCATTA TCTCTTCTGGGAGGTGTACGAGGTGGCTAATTTAAATTCATAACGAGGGG GAGCTAATTGCGCCTGTGGCCAGAATGAAGTGCCTGATAGTGTTTGGTCT GATTGTGGCCCTGTTTGGTGCCTTCGTGGGCTATGGCTACGTGGTATTCA CGGAACTGACCAAGCCCCTGCCCAAGCCGGAGTTCAAGGATGATACGTAC TGGGGTCCCGGCGATGCCAAGGACTTTGTGCCCGACGAAAAGATCTACGA GTTTAAGCTGCAGGTGCCGCAATCGGAGATCGATGATCTGCGAAAGGAAC TCAACCGCACGCTGAGACTAACCGAACCGCTGGACGGAATCGCCTTTGAA TACGGATTCAACACCTATGCACTGGAGCAGTTTGTGGACTACTGGCGGGA CAATTACCTGACCAAGTGGGATGAGCGCCAGGAGCTGTTCAACTCGTTCA AGCAGTACAAGACCGAAATTCAGGGCTTGAATATTCACTATATCCACGAA AAGGTATCCGAGGAGGCTAAGGAAAAGAAACACGTATATCCTCTGCTCCT GCTCCACGGCTGGCCAGGATCGGTGCGCGAGTTCTTCGACTTTATACCCA TGCTAACCAAGCACTCAAACATCACGGATTACGCTTTTGAGGTCGTGGCA CCATCCCTGGTGGGCTACGGATGGTCCGATGCTGCCACGCGTCCCGGATT TAATGCCGCTGAAATGGCCACTGTGATGCGTAACCTGATGCTGCGTCTGG GCCACAAGAAGTTCTTCATCCAAGGCGGAGATTGGGGCAGCATCATTGGC AGCAACTTGGCCACCTTGTATCCAGAGAACGTAATCGGTTACCACTCGAA CATGTGCGTTCTGCACACGCCACTGGCCATTCTGAAGGGAATCTACGGCA GCTTCTTCCCGGAGAAGTACTTGCCGTCCAGATTCTTTGTGGATCATCAC TTCCCCGTGTGGGAAAAATGGCTGGAGCTGCTGGAGGAAAGCGGTTACTT TCACATCCAGGCCACCAAGCCGGATACGATTGGAGCGGCTCTGACCTCCA GTCCCGTCGGCTTGGCCTCCTATATCCTCGAGAAATTCCAGACCTGCACA AATCCCGGCCTGAAGCAGGACTTTGGCGCCATAGTCACTGTCTTCGGCCT GGAGGCTGTGCTGGACAACCTGATGGTCTACTATCTGACGAACTCGGCCA CGACAGCGGCTCGTTTCTACCTGGAGAACGTGTCCAAGACGTACAGGGAT CTCCAGCTGGATCGTGTGCAGTCCCCGGTTCCCATGGGCTGTGCCCGCTT CCGGTTCGATCTGGCCTCGGTGACTGACTGGCAGCTGAGGGACAAGTTCC CCAACCTGACCCACTCGATGTACTTCCAGCAGGGCAGCCACTTTGCCGCC CTGGAGATGCCGGCCATGTTGTTCAATGATTTTACCGCCTTTGTGGGAAA AATTGGCCTACACGGCGAGAAGAGAAAATAAATTGTTTTAAGTATAATAA AAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh3-RA | 1732 | Jheh3-RA | 151..1698 | 1..1548 | 7740 | 100 | Plus |
Jheh1-RA | 1646 | Jheh1-RA | 805..938 | 774..907 | 340 | 83.5 | Plus |
Jheh1-RA | 1646 | Jheh1-RA | 1060..1124 | 1032..1096 | 160 | 83 | Plus |
Jheh1-RA | 1646 | Jheh1-RA | 624..672 | 599..647 | 140 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14747509..14748326 | 1548..731 | 4045 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 14748661..14749187 | 525..1 | 2495 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 14748394..14748600 | 731..525 | 1005 | 99 | Minus |
chr2R | 21145070 | chr2R | 14741216..14741349 | 907..774 | 340 | 83.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18860375..18861192 | 1548..731 | 4090 | 100 | Minus |
2R | 25286936 | 2R | 18861526..18862050 | 525..1 | 2625 | 100 | Minus |
2R | 25286936 | 2R | 18861260..18861466 | 731..525 | 1035 | 100 | Minus |
2R | 25286936 | 2R | 18854088..18854221 | 907..774 | 340 | 83.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18861574..18862391 | 1548..731 | 4090 | 100 | Minus |
2R | 25260384 | 2R | 18862725..18863249 | 525..1 | 2625 | 100 | Minus |
2R | 25260384 | 2R | 18862459..18862665 | 731..525 | 1035 | 100 | Minus |
2R | 25260384 | 2R | 18855287..18855420 | 907..774 | 340 | 83.5 | Minus |
2R | 25260384 | 2R | 18855101..18855165 | 1096..1032 | 160 | 83 | Minus |
2R | 25260384 | 2R | 18855611..18855659 | 647..599 | 140 | 85.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14747509..14748326 | 731..1548 | 99 | <- | Minus |
chr2R | 14748395..14748599 | 526..730 | 99 | <- | Minus |
chr2R | 14748661..14749187 | 1..525 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 1..1407 | 125..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 1..1407 | 125..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 1..1407 | 125..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 1..1407 | 125..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 1..1407 | 125..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 22..1569 | 1..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 22..1569 | 1..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 29..1576 | 1..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 22..1569 | 1..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh3-RA | 29..1576 | 1..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18860375..18861192 | 731..1548 | 100 | <- | Minus |
2R | 18861261..18861465 | 526..730 | 100 | <- | Minus |
2R | 18861526..18862050 | 1..525 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18860375..18861192 | 731..1548 | 100 | <- | Minus |
2R | 18861261..18861465 | 526..730 | 100 | <- | Minus |
2R | 18861526..18862050 | 1..525 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18860375..18861192 | 731..1548 | 100 | <- | Minus |
2R | 18861261..18861465 | 526..730 | 100 | <- | Minus |
2R | 18861526..18862050 | 1..525 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14747880..14748697 | 731..1548 | 100 | <- | Minus |
arm_2R | 14748766..14748970 | 526..730 | 100 | <- | Minus |
arm_2R | 14749031..14749555 | 1..525 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18861574..18862391 | 731..1548 | 100 | <- | Minus |
2R | 18862460..18862664 | 526..730 | 100 | <- | Minus |
2R | 18862725..18863249 | 1..525 | 100 | Minus |
Translation from 124 to 1530
> LD35885.hyp MKCLIVFGLIVALFGAFVGYGYVVFTELTKPLPKPEFKDDTYWGPGDAKD FVPDEKIYEFKLQVPQSEIDDLRKELNRTLRLTEPLDGIAFEYGFNTYAL EQFVDYWRDNYLTKWDERQELFNSFKQYKTEIQGLNIHYIHEKVSEEAKE KKHVYPLLLLHGWPGSVREFFDFIPMLTKHSNITDYAFEVVAPSLVGYGW SDAATRPGFNAAEMATVMRNLMLRLGHKKFFIQGGDWGSIIGSNLATLYP ENVIGYHSNMCVLHTPLAILKGIYGSFFPEKYLPSRFFVDHHFPVWEKWL ELLEESGYFHIQATKPDTIGAALTSSPVGLASYILEKFQTCTNPGLKQDF GAIVTVFGLEAVLDNLMVYYLTNSATTAARFYLENVSKTYRDLQLDRVQS PVPMGCARFRFDLASVTDWQLRDKFPNLTHSMYFQQGSHFAALEMPAMLF NDFTAFVGKIGLHGEKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh3-PA | 468 | CG15106-PA | 1..468 | 1..468 | 2508 | 100 | Plus |
Jheh1-PA | 474 | CG15101-PA | 10..462 | 9..457 | 1221 | 53 | Plus |
Jheh2-PD | 463 | CG15102-PD | 8..459 | 9..459 | 1121 | 47.2 | Plus |
Jheh2-PA | 463 | CG15102-PA | 8..459 | 9..459 | 1121 | 47.2 | Plus |
Translation from 124 to 1530
> LD35885.pep MKCLIVFGLIVALFGAFVGYGYVVFTELTKPLPKPEFKDDTYWGPGDAKD FVPDEKIYEFKLQVPQSEIDDLRKELNRTLRLTEPLDGIAFEYGFNTYAL EQFVDYWRDNYLTKWDERQELFNSFKQYKTEIQGLNIHYIHEKVSEEAKE KKHVYPLLLLHGWPGSVREFFDFIPMLTKHSNITDYAFEVVAPSLVGYGW SDAATRPGFNAAEMATVMRNLMLRLGHKKFFIQGGDWGSIIGSNLATLYP ENVIGYHSNMCVLHTPLAILKGIYGSFFPEKYLPSRFFVDHHFPVWEKWL ELLEESGYFHIQATKPDTIGAALTSSPVGLASYILEKFQTCTNPGLKQDF GAIVTVFGLEAVLDNLMVYYLTNSATTAARFYLENVSKTYRDLQLDRVQS PVPMGCARFRFDLASVTDWQLRDKFPNLTHSMYFQQGSHFAALEMPAMLF NDFTAFVGKIGLHGEKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13741-PA | 468 | GF13741-PA | 1..466 | 1..466 | 2272 | 88.6 | Plus |
Dana\GF13744-PA | 474 | GF13744-PA | 3..465 | 5..460 | 1203 | 50 | Plus |
Dana\GF13743-PA | 462 | GF13743-PA | 9..462 | 10..462 | 1119 | 46.6 | Plus |
Dana\GF13742-PA | 462 | GF13742-PA | 8..459 | 4..459 | 1099 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20933-PA | 468 | GG20933-PA | 1..468 | 1..468 | 2445 | 96.2 | Plus |
Dere\GG20936-PA | 474 | GG20936-PA | 7..465 | 6..460 | 1204 | 51.3 | Plus |
Dere\GG20934-PA | 463 | GG20934-PA | 8..459 | 9..459 | 1145 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19728-PA | 463 | GH19728-PA | 1..460 | 1..460 | 2009 | 76.7 | Plus |
Dgri\GH19730-PA | 474 | GH19730-PA | 7..465 | 9..460 | 1171 | 51.1 | Plus |
Dgri\GH19729-PA | 462 | GH19729-PA | 11..459 | 9..459 | 1165 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh3-PA | 468 | CG15106-PA | 1..468 | 1..468 | 2508 | 100 | Plus |
Jheh1-PA | 474 | CG15101-PA | 10..462 | 9..457 | 1221 | 53 | Plus |
Jheh2-PD | 463 | CG15102-PD | 8..459 | 9..459 | 1121 | 47.2 | Plus |
Jheh2-PA | 463 | CG15102-PA | 8..459 | 9..459 | 1121 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20152-PA | 465 | GI20152-PA | 1..465 | 1..465 | 2068 | 79.1 | Plus |
Dmoj\GI20154-PA | 474 | GI20154-PA | 7..465 | 9..460 | 1181 | 50.4 | Plus |
Dmoj\GI20153-PA | 464 | GI20153-PA | 11..459 | 9..459 | 1176 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10579-PA | 468 | GL10579-PA | 1..468 | 1..468 | 2157 | 84.6 | Plus |
Dper\GL10582-PA | 474 | GL10582-PA | 4..465 | 3..460 | 1189 | 50.5 | Plus |
Dper\GL10580-PA | 325 | GL10580-PA | 9..320 | 10..320 | 789 | 47.5 | Plus |
Dper\GL10581-PA | 117 | GL10581-PA | 6..117 | 351..462 | 260 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13496-PA | 468 | GA13496-PA | 1..468 | 1..468 | 2158 | 84.6 | Plus |
Dpse\GA13492-PA | 474 | GA13492-PA | 4..465 | 3..460 | 1191 | 50.5 | Plus |
Dpse\GA13493-PA | 463 | GA13493-PA | 9..463 | 10..462 | 1166 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Jheh3-PA | 468 | GM19861-PA | 1..468 | 1..468 | 2470 | 97.2 | Plus |
Dsec\Jheh1-PA | 474 | GM19863-PA | 7..465 | 6..460 | 1220 | 52.1 | Plus |
Dsec\GM19862-PA | 463 | GM19862-PA | 8..459 | 9..459 | 1124 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Jheh3-PA | 468 | GD25348-PA | 1..468 | 1..468 | 2471 | 97.6 | Plus |
Dsim\Jheh1-PA | 474 | GD25350-PA | 7..465 | 6..460 | 1219 | 52.1 | Plus |
Dsim\GD25349-PA | 463 | GD25349-PA | 8..459 | 9..459 | 1133 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22429-PA | 466 | GJ22429-PA | 1..466 | 1..466 | 2070 | 78.8 | Plus |
Dvir\GJ22430-PA | 462 | GJ22430-PA | 11..459 | 9..459 | 1186 | 48.2 | Plus |
Dvir\GJ22431-PA | 474 | GJ22431-PA | 7..465 | 9..460 | 1177 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20691-PA | 467 | GK20691-PA | 1..465 | 1..465 | 2111 | 81.3 | Plus |
Dwil\GK20693-PA | 474 | GK20693-PA | 7..465 | 6..460 | 1224 | 51.9 | Plus |
Dwil\GK20692-PA | 463 | GK20692-PA | 23..462 | 21..462 | 1167 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13871-PA | 468 | GE13871-PA | 1..468 | 1..468 | 2438 | 95.9 | Plus |
Dyak\GE13873-PA | 474 | GE13873-PA | 7..465 | 6..460 | 1216 | 51.9 | Plus |
Dyak\GE13872-PA | 463 | GE13872-PA | 8..459 | 9..459 | 1125 | 47 | Plus |