Clone LD35939 Report

Gene	Date	Evidence
CG14998	2010-12-02	CDS novel splice

Clone Sequence Records

LD35939.complete Sequence

2623 bp assembled on 2011-03-10

GenBank Submission: BT126155.1

> LD35939.complete
CTGGCCACACTGTTTGCAGCGCTAAAGTAAAGTGAAATATGGCGAGTCTT
GGGGGCCAACACGGAAATATTTCGACTAATCCAGAAGTGGAAAACACAGC
CAAGCGACCCGAAAGTCGCGAGGGCAGCGCCGAGCGAAAAGACCGTGAGG
AGAAACTAAAATATGCCCGCGATCGCCAAAATGAGGAGCGCCACCGGAAA
ATCGAGGAACTGCGTGCCCAGGCGGAGGCCGCCCAGCGGTACCGTGAACA
AAAGGAGGAGGAGCGCCGTCGACGCATCGAGGAGATCCGTACCCGGGACA
CAGAGAAGCGCCACCAGGTGGAGGAGCGCAAGAAGGCCATTTTCGAGGCC
GAGAAGGAGCGCCGCGAGTACATCCTCAAAAAGAATCAGGAACGCGAGTC
CCGGATAGAAGTGAAAAAACGGGACAGAAACTCCATCGGCTTCGCATTTG
GCTCCTCGACTCCCCGCCTGCTGGATGTGCCCGCGGATTATGGTCTGGTA
TCGCCCAGTGCCTTTTGGGGTCAGCGGAGGTCCACATCTATATCGAACGT
AGCGGGCGCCTCGCTCACACGTCGAAGTTCAGAGCGTGAACTTGCCGACA
GTGGTGCTAAGAAGCGTGCCTCCTCATCGACGGACCGACAAGATGGCTCG
CGATCGGGAAATGCCACGCCCGGCGGACACTTCAATAACTCAAGGCCCGG
CAGCGCCATGTCCACATCGACAAACATGTCCACATCCGGGCTGGTGCCCA
GGCGACCGGCAACGGCACCCCGGAAACCGAGGCCCGCCAGTATCGCCGGA
ACGGGCATGTCTCTCGAGGAGATTAACAAACTCAAGAGGGATCAGAAGCC
GCCCGTGAAGACGACAGCCGCCTCGCCATCCGCACAAACGACACCCAAAC
GAACTGCAAACCTTATGTCCACCTCCCTGATCGTGACCTCCAGCTCATCG
CGGCTGAGCAGCGCCGAAAAGAAGACGCCTTCGAAGCGGGAACCTCCGGT
ACCCAAGGCAGCATCAGCTTCAAAGGCGCTGCCAAGTCGCACAGCCAGTT
CCGAGCGCATCAGTAGGCTTACCAAGGAACCGAAAACCAAGGATACCTCT
GCAATGACTAGGTCGATGATTGTCACCAGCAGCAGTACCTCCACCATCAC
AAAACCAGCTCCTGCCCCGGTCGCACCCACATCCGCTCCAGTTCCCGAGC
AGAACGGTGTGGCCAAGGAGGTAGAGAAGACTACTGCAGATGAGCCAGTT
CCTGAGGCTGAAGTTCCTACCGAGGCTCCCGTTGTTGTTCCATCAGTGAG
CAAGGCTGAGAAGGAAGCATTGAACACGGAGAAAACGGAGGAAGGGGCGC
GTCAGGAGGAGGAGCAAATTTTAGCGGTGGAATCTGTGCCCGAAGCTTTG
GTTACCTCAATTAATGTAGAGGAAAAATCGGATGAGGGCAATGAGAAGGA
GGTTCCTAAGCCCCAGGAGCAGGCTGCGCCCAAGAAACCATCGCGCAGCA
AGGAGAACTCAGAGGTGCGGGAACTGACCCCACCAGAGGGTGCTGATCTG
ATGACCGCTTCGATGATGGCCAAGAAGATCACGACCGAGGAGGAGGCCAA
GGCCGCTTTGGCCGAGAGACGACGCCTGGCCCGCGAGGAGGCCGAACGAC
AGGCGGAATTAGAGCGCCAACGACTGGAGGCTGAACGCCTGGCAGAGATC
AAAGCCCAAGAGGAGGAGGCGGAGCGCCAACGCCTGTTCGAGGAGGAGTC
CACTCGCCTGGCCGAGGAACAGCGCCGCGGGGAGGAGGAGCGCCTGCGCA
AGGCCATCGAGGAAGCCCAACAGCGTGAGGAGGAGGAGAAACGCCGGCGC
GAGGAGGAGGAGAAACAGCGCGTGGAACGTGAGGAGGCCGAGAAGAAGGC
CAAGGAGGAGGCAGAGAAGCAGCGCGTCGAGGTGGCTGAGCGCCTTAAGC
GGGAGGAGAAGGAGCGCGAGGAACGCCGCAAGCGGGTGGAGGCCATCATG
CTGCGCACCCGCAAGGGAGGCGCTGCCACCACACCCTCCAAGGACGCTAA
CGACAAAGCAGCTCCTGCCGCAACGGCTCCAGAGAATAATAGCAGCAGCA
ACAGCAGCGTCACCGGGAGCAGCAACAACTCGGCTGAGGGCTCGCCCAGC
GCAGCAGATTCCACGCCAGCACCAACGGCAACGGAAACTGTCCAGGAGGC
GCCAAACAGTCAGGCGATGTACGAGCAATCGGTGCTAGACAAGGAGAACT
CGCTCATCAATAGCTTCTCCACGATGATCATCGATGAGAATGCCAAGAAC
CTGCAGCAGGTGAGCAACGGCAAGTTGCTGGTGGACTTTGAGAGCACCAA
TACTGTGCCGGCGGTGGCCAACGGCAATGGACACATCGAGAATGTCAACA
ACAAGAATGACATCAATCTGCTGCAGGACGTAGTCGCTCCGGTCGCCACC
CAGCTGATTGACCTGAGCATCGAGTCACAAGATCTACACCTGAACAATAA
CAACAGCTTGCTGACGAGCACAGCGGCAACCACCACGCTAGTCACTGCTG
ATAGTCACGAAAATAAAGATATATCGCTGCTGTGAATTGGATGAGGAAAC
CAAAAAAAAAAAAAAAAAAAAAA

LD35939.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:20:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3L	24539361	chr3L	4125266..4126089	1812..989	4120	100	Minus
chr3L	24539361	chr3L	4124522..4124888	2407..2041	1835	100	Minus
chr3L	24539361	chr3L	4131341..4131593	390..138	1265	100	Minus
chr3L	24539361	chr3L	4124963..4125196	2043..1810	1170	100	Minus
chr3L	24539361	chr3L	4126375..4126549	819..645	875	100	Minus
chr3L	24539361	chr3L	4126147..4126318	990..819	860	100	Minus
chr3L	24539361	chr3L	4124305..4124465	2568..2408	805	100	Minus
chr3L	24539361	chr3L	4131134..4131278	531..387	725	100	Minus
chr3L	24539361	chr3L	4130506..4130624	646..528	595	100	Minus
chr3L	24539361	chr3L	4133840..4133926	87..1	435	100	Minus
chr3L	24539361	chr3L	4133155..4133210	141..86	280	100	Minus

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:20:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3L	28110227	3L	4125880..4126703	1812..989	4120	100	Minus
3L	28110227	3L	4125136..4125502	2407..2041	1835	100	Minus
3L	28110227	3L	4131955..4132207	390..138	1265	100	Minus
3L	28110227	3L	4125577..4125810	2043..1810	1170	100	Minus
3L	28110227	3L	4126989..4127163	819..645	875	100	Minus
3L	28110227	3L	4126761..4126932	990..819	860	100	Minus
3L	28110227	3L	4124919..4125079	2568..2408	805	100	Minus
3L	28110227	3L	4131748..4131892	531..387	725	100	Minus
3L	28110227	3L	4131120..4131238	646..528	595	100	Minus
3L	28110227	3L	4134454..4134540	87..1	435	100	Minus
3L	28110227	3L	4133769..4133824	141..86	280	100	Minus
3L	28110227	3L	4124817..4124854	2604..2567	190	100	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:27

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3L	28103327	3L	4125880..4126703	1812..989	4120	100	Minus
3L	28103327	3L	4125136..4125502	2407..2041	1835	100	Minus
3L	28103327	3L	4131955..4132207	390..138	1265	100	Minus
3L	28103327	3L	4125577..4125810	2043..1810	1170	100	Minus
3L	28103327	3L	4126989..4127163	819..645	875	100	Minus
3L	28103327	3L	4126761..4126932	990..819	860	100	Minus
3L	28103327	3L	4124919..4125079	2568..2408	805	100	Minus
3L	28103327	3L	4131748..4131892	531..387	725	100	Minus
3L	28103327	3L	4131120..4131238	646..528	595	100	Minus
3L	28103327	3L	4134454..4134540	87..1	435	100	Minus
3L	28103327	3L	4133769..4133824	141..86	280	100	Minus
3L	28103327	3L	4124817..4124854	2604..2567	190	100	Minus

Blast to na_te.dros performed 2019-03-16 22:20:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6729..6827	2085..2182	186	66.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6723..6856	2057..2190	183	61.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2392..2538	2049..2188	177	62.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2749..2877	2057..2185	176	61.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2320..2421	2088..2188	174	64.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2341..2485	2049..2189	173	61.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6729..6869	2049..2188	172	63	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6724..6893	2022..2188	166	60.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6817..7004	2005..2182	159	60.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2377..2515	2057..2189	158	61.4	Plus
roo	9092	roo DM_ROO 9092bp	1078..1151	2055..2129	156	69.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6778..6980	2022..2241	153	57.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6714..6823	2085..2190	152	63.6	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2305..2823	2025..2536	147	53	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2321..2394	2055..2129	147	68	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6811..6920	2022..2129	147	64	Plus
roo	9092	roo DM_ROO 9092bp	1070..1142	2056..2129	142	67.6	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2306..2394	2098..2188	126	61.5	Plus
roo	9092	roo DM_ROO 9092bp	1045..1130	2037..2129	124	64.5	Plus
roo	9092	roo DM_ROO 9092bp	1059..1162	2007..2116	121	62.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	1516..1572	2078..2129	120	73.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	1501..1587	2028..2120	119	62.8	Plus
roo	9092	roo DM_ROO 9092bp	1046..1164	2012..2130	119	59.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2758..2882	2091..2217	116	57.8	Plus

LD35939.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:21:21 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3L	4124206..4124238	2569..2601	100	<-	Minus
chr3L	4124305..4124465	2408..2568	100	<-	Minus
chr3L	4124522..4124799	2130..2407	100	==	Minus
chr3L	4124873..4124886	2043..2056	100	<-	Minus
chr3L	4124964..4125083	1923..2042	100	==	Minus
chr3L	4125180..4125194	1812..1826	100	<-	Minus
chr3L	4125267..4126088	990..1811	100	<-	Minus
chr3L	4126148..4126317	820..989	100	<-	Minus
chr3L	4126375..4126548	646..819	100	<-	Minus
chr3L	4130507..4130622	530..645	100	<-	Minus
chr3L	4131136..4131275	390..529	100	<-	Minus
chr3L	4131342..4131589	142..389	100	<-	Minus
chr3L	4133155..4133208	88..141	100	<-	Minus
chr3L	4133840..4133926	1..87	100		Minus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-10 10:10:39 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RF	1..102	39..141	99	->	Plus
ens-RF	221..724	142..645	100	->	Plus
ens-RF	1787..3726	646..2585	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:54:56 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RH	1..2547	39..2585	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:27:16 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RH	1..2547	39..2585	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-10 10:10:38 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RA	11..152	1..143	99	<-	Plus
ens-RA	271..2728	144..2601	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:54:56 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RH	11..2611	1..2601	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:16 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ens-RH	11..2611	1..2601	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:21 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	4125136..4125500	2043..2407	100	<-	Minus
3L	4125578..4125808	1812..2042	100	<-	Minus
3L	4124820..4124852	2569..2601	100	<-	Minus
3L	4124919..4125079	2408..2568	100	<-	Minus
3L	4125881..4126702	990..1811	100	<-	Minus
3L	4126762..4126931	820..989	100	<-	Minus
3L	4126989..4127162	646..819	100	<-	Minus
3L	4131121..4131236	530..645	100	<-	Minus
3L	4131750..4131889	390..529	100	<-	Minus
3L	4131956..4132203	142..389	100	<-	Minus
3L	4133769..4133822	88..141	100	<-	Minus
3L	4134454..4134540	1..87	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:21 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	4125136..4125500	2043..2407	100	<-	Minus
3L	4125578..4125808	1812..2042	100	<-	Minus
3L	4124820..4124852	2569..2601	100	<-	Minus
3L	4124919..4125079	2408..2568	100	<-	Minus
3L	4125881..4126702	990..1811	100	<-	Minus
3L	4126762..4126931	820..989	100	<-	Minus
3L	4126989..4127162	646..819	100	<-	Minus
3L	4131121..4131236	530..645	100	<-	Minus
3L	4131750..4131889	390..529	100	<-	Minus
3L	4131956..4132203	142..389	100	<-	Minus
3L	4133769..4133822	88..141	100	<-	Minus
3L	4134454..4134540	1..87	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:21:21 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	4125136..4125500	2043..2407	100	<-	Minus
3L	4125578..4125808	1812..2042	100	<-	Minus
3L	4124820..4124852	2569..2601	100	<-	Minus
3L	4124919..4125079	2408..2568	100	<-	Minus
3L	4125881..4126702	990..1811	100	<-	Minus
3L	4126762..4126931	820..989	100	<-	Minus
3L	4126989..4127162	646..819	100	<-	Minus
3L	4131121..4131236	530..645	100	<-	Minus
3L	4131750..4131889	390..529	100	<-	Minus
3L	4131956..4132203	142..389	100	<-	Minus
3L	4133769..4133822	88..141	100	<-	Minus
3L	4134454..4134540	1..87	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:54:56 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3L	4124919..4125079	2408..2568	100	<-	Minus
arm_3L	4124820..4124852	2569..2601	100	<-	Minus
arm_3L	4125136..4125500	2043..2407	100	<-	Minus
arm_3L	4125578..4125808	1812..2042	100	<-	Minus
arm_3L	4125881..4126702	990..1811	100	<-	Minus
arm_3L	4126762..4126931	820..989	100	<-	Minus
arm_3L	4126989..4127162	646..819	100	<-	Minus
arm_3L	4131121..4131236	530..645	100	<-	Minus
arm_3L	4131750..4131889	390..529	100	<-	Minus
arm_3L	4131956..4132203	142..389	100	<-	Minus
arm_3L	4133769..4133822	88..141	100	<-	Minus
arm_3L	4134454..4134540	1..87	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:01:02 Download gff for LD35939.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	4125136..4125500	2043..2407	100	<-	Minus
3L	4125578..4125808	1812..2042	100	<-	Minus
3L	4125881..4126702	990..1811	100	<-	Minus
3L	4126762..4126931	820..989	100	<-	Minus
3L	4126989..4127162	646..819	100	<-	Minus
3L	4131121..4131236	530..645	100	<-	Minus
3L	4131750..4131889	390..529	100	<-	Minus
3L	4131956..4132203	142..389	100	<-	Minus
3L	4133769..4133822	88..141	100	<-	Minus
3L	4134454..4134540	1..87	100		Minus
3L	4124820..4124852	2569..2601	100	<-	Minus
3L	4124919..4125079	2408..2568	100	<-	Minus

LD35939.pep Sequence

Translation from 38 to 2584

> LD35939.pep
MASLGGQHGNISTNPEVENTAKRPESREGSAERKDREEKLKYARDRQNEE
RHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDTEKRHQVEERKKA
IFEAEKERREYILKKNQERESRIEVKKRDRNSIGFAFGSSTPRLLDVPAD
YGLVSPSAFWGQRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDR
QDGSRSGNATPGGHFNNSRPGSAMSTSTNMSTSGLVPRRPATAPRKPRPA
SIAGTGMSLEEINKLKRDQKPPVKTTAASPSAQTTPKRTANLMSTSLIVT
SSSSRLSSAEKKTPSKREPPVPKAASASKALPSRTASSERISRLTKEPKT
KDTSAMTRSMIVTSSSTSTITKPAPAPVAPTSAPVPEQNGVAKEVEKTTA
DEPVPEAEVPTEAPVVVPSVSKAEKEALNTEKTEEGARQEEEQILAVESV
PEALVTSINVEEKSDEGNEKEVPKPQEQAAPKKPSRSKENSEVRELTPPE
GADLMTASMMAKKITTEEEAKAALAERRRLAREEAERQAELERQRLEAER
LAEIKAQEEEAERQRLFEEESTRLAEEQRRGEEERLRKAIEEAQQREEEE
KRRREEEEKQRVEREEAEKKAKEEAEKQRVEVAERLKREEKEREERRKRV
EAIMLRTRKGGAATTPSKDANDKAAPAATAPENNSSSNSSVTGSSNNSAE
GSPSAADSTPAPTATETVQEAPNSQAMYEQSVLDKENSLINSFSTMIIDE
NAKNLQQVSNGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVA
PVATQLIDLSIESQDLHLNNNNSLLTSTAATTTLVTADSHENKDISLL*

LD35939.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:27:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF23887-PA	1282	GF23887-PA	625..1282	203..848	1982	82.8	Plus
Dana\GF23887-PA	1282	GF23887-PA	64..263	1..205	744	82	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:27:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG14220-PA	1241	GG14220-PA	596..1241	203..848	3123	96.3	Plus
Dere\GG14220-PA	1241	GG14220-PA	1..244	1..205	867	81.1	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:27:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH15554-PA	1273	GH15554-PA	562..1273	203..848	1354	65	Plus
Dgri\GH15554-PA	1273	GH15554-PA	1..219	1..216	782	79.9	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
ens-PH	848	CG14998-PH	1..848	1..848	4178	100	Plus
ens-PB	851	CG14998-PB	1..851	1..848	4164	99.6	Plus
ens-PA	887	CG14998-PA	1..887	1..848	4128	95.6	Plus
ens-PL	898	CG14998-PL	1..898	1..848	4106	94.4	Plus
ens-PE	898	CG14998-PE	1..898	1..848	4106	94.4	Plus
ens-PC	833	CG14998-PC	1..833	1..848	4068	98	Plus
ens-PD	983	CG14998-PD	1..983	1..848	3312	74.9	Plus
ens-PJ	968	CG14998-PJ	1..968	1..848	3304	75.7	Plus
ens-PG	1100	CG14998-PG	423..1100	161..848	3173	95.6	Plus
ens-PK	1015	CG14998-PK	338..1015	161..848	3173	95.6	Plus
ens-PI	933	CG14998-PI	280..933	195..848	3168	98.8	Plus
ens-PF	1241	CG14998-PF	596..1241	203..848	3167	100	Plus
ens-PG	1100	CG14998-PG	1..274	1..309	1022	72.2	Plus
ens-PF	1241	CG14998-PF	1..313	1..309	972	64.1	Plus
CG2839-PA	826	CG2839-PA	430..673	393..651	285	32.6	Plus
Nopp140-PE	773	CG7421-PE	66..645	221..823	280	25.1	Plus
Nopp140-PF	685	CG7421-PF	66..554	221..714	279	26.6	Plus
Nopp140-PB	686	CG7421-PB	66..554	221..714	279	26.6	Plus
Nopp140-PA	720	CG7421-PA	66..554	221..714	279	26.6	Plus
futsch-PF	5495	CG34387-PF	3334..4093	14..753	273	22.9	Plus
futsch-PE	5495	CG34387-PE	3334..4093	14..753	273	22.9	Plus
futsch-PC	5495	CG34387-PC	3334..4093	14..753	273	22.9	Plus
CG2839-PA	826	CG2839-PA	289..559	392..651	262	32.7	Plus
futsch-PF	5495	CG34387-PF	3140..3939	3..757	262	22.2	Plus
futsch-PE	5495	CG34387-PE	3140..3939	3..757	262	22.2	Plus
futsch-PC	5495	CG34387-PC	3140..3939	3..757	262	22.2	Plus
futsch-PF	5495	CG34387-PF	1657..2455	12..805	260	21.3	Plus
futsch-PE	5495	CG34387-PE	1657..2455	12..805	260	21.3	Plus
futsch-PC	5495	CG34387-PC	1657..2455	12..805	260	21.3	Plus
CG2839-PA	826	CG2839-PA	477..749	387..673	252	28.4	Plus
CG2839-PA	826	CG2839-PA	489..756	387..660	252	29.5	Plus
Caf1-180-PB	1183	CG12109-PB	224..607	260..626	250	25.3	Plus
CG2839-PA	826	CG2839-PA	332..589	393..651	249	31.7	Plus
Muc68D-PB	1514	CG6004-PB	403..1137	12..754	249	19.3	Plus
CG2839-PA	826	CG2839-PA	281..537	418..673	247	27.5	Plus
CG2839-PA	826	CG2839-PA	374..595	422..651	245	32.1	Plus
futsch-PF	5495	CG34387-PF	1511..2275	14..738	241	22.1	Plus
futsch-PE	5495	CG34387-PE	1511..2275	14..738	241	22.1	Plus
futsch-PC	5495	CG34387-PC	1511..2275	14..738	241	22.1	Plus
CG2839-PA	826	CG2839-PA	362..613	393..651	239	31.1	Plus
Caf1-180-PB	1183	CG12109-PB	223..648	309..706	231	24.4	Plus
CG2839-PA	826	CG2839-PA	269..444	462..652	225	32.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	3456..4143	13..737	225	19.4	Plus
Strn-Mlck-PV	7944	CG44162-PV	3495..4182	13..737	225	19.4	Plus
Strn-Mlck-PS	8216	CG44162-PS	3456..4143	13..737	225	19.4	Plus
Strn-Mlck-PU	8255	CG44162-PU	3495..4182	13..737	225	19.4	Plus
Strn-Mlck-PT	7905	CG44162-PT	3731..4494	12..756	224	17.8	Plus
Strn-Mlck-PV	7944	CG44162-PV	3770..4533	12..756	224	17.8	Plus
Strn-Mlck-PS	8216	CG44162-PS	3731..4494	12..756	224	17.8	Plus
Strn-Mlck-PU	8255	CG44162-PU	3770..4533	12..756	224	17.8	Plus
Strn-Mlck-PT	7905	CG44162-PT	3536..4318	12..757	223	18.9	Plus
Strn-Mlck-PV	7944	CG44162-PV	3575..4357	12..757	223	18.9	Plus
Strn-Mlck-PS	8216	CG44162-PS	3536..4318	12..757	223	18.9	Plus
Strn-Mlck-PU	8255	CG44162-PU	3575..4357	12..757	223	18.9	Plus
Strn-Mlck-PT	7905	CG44162-PT	4446..5152	12..774	222	19	Plus
Strn-Mlck-PV	7944	CG44162-PV	4485..5191	12..774	222	19	Plus
Strn-Mlck-PS	8216	CG44162-PS	4446..5152	12..774	222	19	Plus
Strn-Mlck-PU	8255	CG44162-PU	4485..5191	12..774	222	19	Plus
Strn-Mlck-PT	7905	CG44162-PT	4186..4903	12..757	220	19.5	Plus
Strn-Mlck-PV	7944	CG44162-PV	4225..4942	12..757	220	19.5	Plus
Strn-Mlck-PS	8216	CG44162-PS	4186..4903	12..757	220	19.5	Plus
Strn-Mlck-PU	8255	CG44162-PU	4225..4942	12..757	220	19.5	Plus
spen-PH	5458	CG18497-PH	1547..2051	224..711	220	21	Plus
spen-PC	5476	CG18497-PC	1565..2069	224..711	220	21	Plus
spen-PG	5487	CG18497-PG	1549..2053	224..711	220	21	Plus
spen-PE	5505	CG18497-PE	1567..2071	224..711	220	21	Plus
spen-PD	5505	CG18497-PD	1567..2071	224..711	220	21	Plus
spen-PF	5510	CG18497-PF	1572..2076	224..711	220	21	Plus
spen-PB	5533	CG18497-PB	1622..2126	224..711	220	21	Plus
spen-PA	5560	CG18497-PA	1622..2126	224..711	220	21	Plus
CG2839-PA	826	CG2839-PA	268..472	438..651	217	28.4	Plus
rudhira-PE	2075	CG43154-PE	1195..1640	191..659	217	23.5	Plus
rudhira-PC	2075	CG43154-PC	1195..1640	191..659	217	23.5	Plus
Muc68D-PB	1514	CG6004-PB	253..949	136..841	215	18.3	Plus
Strn-Mlck-PT	7905	CG44162-PT	3861..4598	12..737	211	18.1	Plus
Strn-Mlck-PV	7944	CG44162-PV	3900..4637	12..737	211	18.1	Plus
Strn-Mlck-PS	8216	CG44162-PS	3861..4598	12..737	211	18.1	Plus
Strn-Mlck-PU	8255	CG44162-PU	3900..4637	12..737	211	18.1	Plus
tnc-PD	2819	CG13648-PD	354..943	249..833	211	23.6	Plus
tnc-PC	2819	CG13648-PC	354..943	249..833	211	23.6	Plus
Muc68D-PB	1514	CG6004-PB	505..1165	12..717	210	17.1	Plus
spen-PH	5458	CG18497-PH	1487..1959	215..659	210	22.1	Plus
spen-PC	5476	CG18497-PC	1505..1977	215..659	210	22.1	Plus
spen-PG	5487	CG18497-PG	1489..1961	215..659	210	22.1	Plus
spen-PE	5505	CG18497-PE	1507..1979	215..659	210	22.1	Plus
spen-PD	5505	CG18497-PD	1507..1979	215..659	210	22.1	Plus
spen-PF	5510	CG18497-PF	1512..1984	215..659	210	22.1	Plus
spen-PB	5533	CG18497-PB	1562..2034	215..659	210	22.1	Plus
spen-PA	5560	CG18497-PA	1562..2034	215..659	210	22.1	Plus
CG45076-PH	619	CG45076-PH	136..603	277..700	203	26	Plus
CG45076-PA	619	CG45076-PA	136..603	277..700	203	26	Plus
CG42795-PC	2904	CG42795-PC	893..1482	164..762	203	18.8	Plus
CG42795-PF	2928	CG42795-PF	893..1482	164..762	203	18.8	Plus
CG42795-PB	3068	CG42795-PB	772..1361	164..762	203	18.8	Plus
CG42795-PA	3189	CG3996-PA	893..1482	164..762	203	18.8	Plus
CG42795-PE	3190	CG42795-PE	893..1482	164..762	203	18.8	Plus
CG42795-PG	3213	CG42795-PG	893..1482	164..762	203	18.8	Plus
eIF5B-PD	1090	CG10840-PD	81..452	378..720	202	22.5	Plus
eIF5B-PE	1108	CG10840-PE	81..452	378..720	202	22.5	Plus
eIF3a-PD	1140	CG9805-PD	656..919	420..679	202	29.7	Plus
eIF3a-PA	1140	CG9805-PA	656..919	420..679	202	29.7	Plus
eIF5B-PF	1144	CG10840-PF	81..452	378..720	202	22.5	Plus
Muc68D-PB	1514	CG6004-PB	346..1049	166..841	198	18.1	Plus
rudhira-PE	2075	CG43154-PE	1102..1486	265..648	196	24.6	Plus
rudhira-PC	2075	CG43154-PC	1102..1486	265..648	196	24.6	Plus
CG42795-PC	2904	CG42795-PC	951..1622	17..736	192	20.2	Plus
CG42795-PF	2928	CG42795-PF	951..1622	17..736	192	20.2	Plus
CG42795-PB	3068	CG42795-PB	830..1501	17..736	192	20.2	Plus
CG42795-PA	3189	CG3996-PA	951..1622	17..736	192	20.2	Plus
CG42795-PE	3190	CG42795-PE	951..1622	17..736	192	20.2	Plus
CG42795-PG	3213	CG42795-PG	951..1622	17..736	192	20.2	Plus
CG2839-PA	826	CG2839-PA	551..800	422..671	190	26.4	Plus
futsch-PF	5495	CG34387-PF	619..1405	2..842	189	21	Plus
futsch-PE	5495	CG34387-PE	619..1405	2..842	189	21	Plus
futsch-PC	5495	CG34387-PC	619..1405	2..842	189	21	Plus
Nopp140-PF	685	CG7421-PF	29..506	245..750	185	21.2	Plus
Nopp140-PB	686	CG7421-PB	29..506	245..750	185	21.2	Plus
Nopp140-PA	720	CG7421-PA	29..506	245..750	185	21.2	Plus
spen-PH	5458	CG18497-PH	1614..2094	242..709	185	20.3	Plus
spen-PC	5476	CG18497-PC	1632..2112	242..709	185	20.3	Plus
spen-PG	5487	CG18497-PG	1616..2096	242..709	185	20.3	Plus
spen-PE	5505	CG18497-PE	1634..2114	242..709	185	20.3	Plus
spen-PD	5505	CG18497-PD	1634..2114	242..709	185	20.3	Plus
spen-PF	5510	CG18497-PF	1639..2119	242..709	185	20.3	Plus
spen-PB	5533	CG18497-PB	1689..2169	242..709	185	20.3	Plus
spen-PA	5560	CG18497-PA	1689..2169	242..709	185	20.3	Plus
CG45076-PH	619	CG45076-PH	5..510	233..680	185	23.1	Plus
CG45076-PA	619	CG45076-PA	5..510	233..680	185	23.1	Plus
tnc-PD	2819	CG13648-PD	2074..2656	171..730	182	20.9	Plus
tnc-PC	2819	CG13648-PC	2074..2656	171..730	182	20.9	Plus
CG2839-PA	826	CG2839-PA	264..388	531..651	181	34.4	Plus
Nopp140-PE	773	CG7421-PE	160..630	190..720	181	20.4	Plus
Nopp140-PB	686	CG7421-PB	160..630	190..720	181	20.4	Plus
Nopp140-PF	685	CG7421-PF	160..629	190..720	179	21	Plus
Nopp140-PA	720	CG7421-PA	160..588	190..620	178	21.3	Plus
CG2839-PA	826	CG2839-PA	594..702	18..129	174	38.4	Plus
futsch-PF	5495	CG34387-PF	1908..2672	21..766	171	20.3	Plus
futsch-PE	5495	CG34387-PE	1908..2672	21..766	171	20.3	Plus
futsch-PC	5495	CG34387-PC	1908..2672	21..766	171	20.3	Plus
CG2839-PA	826	CG2839-PA	309..417	18..130	170	39.8	Plus
CG2839-PA	826	CG2839-PA	349..462	16..130	169	40.7	Plus
CG2839-PA	826	CG2839-PA	582..695	18..128	167	36.5	Plus
futsch-PF	5495	CG34387-PF	581..1069	220..649	166	19.9	Plus
futsch-PE	5495	CG34387-PE	581..1069	220..649	166	19.9	Plus
futsch-PC	5495	CG34387-PC	581..1069	220..649	166	19.9	Plus
CG2839-PA	826	CG2839-PA	556..666	22..129	163	36.6	Plus
CG2839-PA	826	CG2839-PA	545..660	22..129	162	35.3	Plus
CG2839-PA	826	CG2839-PA	435..546	22..128	160	36.3	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:27:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI16830-PA	1012	GI16830-PA	330..1012	196..848	1432	65.7	Plus
Dmoj\GI16830-PA	1012	GI16830-PA	1..219	1..216	863	84.9	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:28:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL12738-PA	748	GL12738-PA	72..748	203..848	1726	78.3	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:28:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA28208-PA	1300	GA28208-PA	603..1272	203..843	1701	77.9	Plus
Dpse\GA28208-PA	1300	GA28208-PA	82..244	7..205	489	66.8	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:28:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM14013-PA	1152	GM14013-PA	797..1152	493..848	1068	97.5	Plus
Dsec\GM14013-PA	1152	GM14013-PA	1..244	1..205	892	83.2	Plus
Dsec\GM14013-PA	1152	GM14013-PA	596..813	203..420	866	94	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:28:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD13292-PA	1106	GD13292-PA	461..1106	203..848	2286	97.5	Plus
Dsim\GD13292-PA	1106	GD13292-PA	1..255	1..216	893	80.4	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:28:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ12577-PA	1236	GJ12577-PA	562..1236	203..848	1513	68.7	Plus
Dvir\GJ12577-PA	1236	GJ12577-PA	1..208	1..205	852	87	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:28:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK10095-PA	1069	GK10095-PA	362..1069	189..848	1696	75.2	Plus
Dwil\GK10095-PA	1069	GK10095-PA	1..250	1..216	805	77.2	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:28:15

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE20647-PA	1242	GE20647-PA	597..1242	203..848	2309	96.1	Plus
Dyak\GE20647-PA	1242	GE20647-PA	1..244	1..205	867	81.1	Plus

LD35939.hyp Sequence

Translation from 38 to 2584

> LD35939.hyp
MASLGGQHGNISTNPEVENTAKRPESREGSAERKDREEKLKYARDRQNEE
RHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDTEKRHQVEERKKA
IFEAEKERREYILKKNQERESRIEVKKRDRNSIGFAFGSSTPRLLDVPAD
YGLVSPSAFWGQRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDR
QDGSRSGNATPGGHFNNSRPGSAMSTSTNMSTSGLVPRRPATAPRKPRPA
SIAGTGMSLEEINKLKRDQKPPVKTTAASPSAQTTPKRTANLMSTSLIVT
SSSSRLSSAEKKTPSKREPPVPKAASASKALPSRTASSERISRLTKEPKT
KDTSAMTRSMIVTSSSTSTITKPAPAPVAPTSAPVPEQNGVAKEVEKTTA
DEPVPEAEVPTEAPVVVPSVSKAEKEALNTEKTEEGARQEEEQILAVESV
PEALVTSINVEEKSDEGNEKEVPKPQEQAAPKKPSRSKENSEVRELTPPE
GADLMTASMMAKKITTEEEAKAALAERRRLAREEAERQAELERQRLEAER
LAEIKAQEEEAERQRLFEEESTRLAEEQRRGEEERLRKAIEEAQQREEEE
KRRREEEEKQRVEREEAEKKAKEEAEKQRVEVAERLKREEKEREERRKRV
EAIMLRTRKGGAATTPSKDANDKAAPAATAPENNSSSNSSVTGSSNNSAE
GSPSAADSTPAPTATETVQEAPNSQAMYEQSVLDKENSLINSFSTMIIDE
NAKNLQQVSNGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVA
PVATQLIDLSIESQDLHLNNNNSLLTSTAATTTLVTADSHENKDISLL*

LD35939.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:04:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
ens-PH	848	CG14998-PH	1..848	1..848	4178	100	Plus
ens-PB	851	CG14998-PB	1..851	1..848	4164	99.6	Plus
ens-PA	887	CG14998-PA	1..887	1..848	4128	95.6	Plus
ens-PL	898	CG14998-PL	1..898	1..848	4106	94.4	Plus
ens-PE	898	CG14998-PE	1..898	1..848	4106	94.4	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	359
Well:	39
Vector:	pOT2
Associated Gene/Transcript	ens-RH
Protein status:	LD35939.pep: gold
Sequenced Size:	2623

Clone LD35939 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD35939.complete Sequence

LD35939.complete Blast Records

LD35939.complete Sim4 Records

LD35939.pep Sequence

LD35939.pep Blast Records

LD35939.hyp Sequence

LD35939.hyp Blast Records