BDGP Sequence Production Resources |
Search the DGRC for LD35981
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 359 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6961-RA |
Protein status: | LD35981.pep: gold |
Preliminary Size: | 2048 |
Sequenced Size: | 1852 |
Gene | Date | Evidence |
---|---|---|
CG6961 | 2001-01-01 | Release 2 assignment |
CG6961 | 2001-10-10 | Blastp of sequenced clone |
CG6961 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6961 | 2008-04-29 | Release 5.5 accounting |
CG6961 | 2008-08-15 | Release 5.9 accounting |
CG6961 | 2008-12-18 | 5.12 accounting |
1852 bp (1852 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061430
> LD35981.complete AGCTCGAATAGTCAGGATAATTTGAATCTGGTTGTTTTTACTTCAAACAT AGCTTAGGAAAGGGTGTGAAAAGCGTATACTGCGAGCCATGGACATCGAT TTGAGTCTGGACGAGATTATAGAGCGGAAGCGCGGGCAACGCGGCTATCG TCCCCTCGACAGAAAGTTCAATGCGAACTTCTCCAAGCCGCGCCAGCTGC TGAACAAGCCTTTTTTCAAGCCATCGGGTGCACGAGGATCTCACTCTGAT ATGCCGGCAAAGCGCACCTTCGATGCCAGAAACACGATTGCCGCGAAGAC ACGGGCCAAGATAGCCGATGCTCGGGATCTGATCAACAAGAGCGTGCGCG ACTCGGGCATCGATGCCCGCCAACTGTTGCTGGAGCGAAAGAAGGCCCGT TCGGCGGGCCCAATACTTATTGATGACGAAGAAGAGTCGTTTGAGCCATC ACATCGCGCACGCGGAAAGGGAGTGCACATCGGTCAGTTTGGTCACCGCC TTAGCATGTCAAACCATGCGGACGGCACCATTCAGGCGAAATGGGACTCG GACGACGGGGTCGTTGAACTGGGTAACCACATGTTGTCCGGCTTGCGTCG AACCTTTGACCCCAGATCCCATAAGCCGGGCAAACCCTTTGCTCCACGAC GCTATATTGATCTTGATAATATGCAGGACCTCGAGGATGAGGAAATATCT CGCACACTGCACTTAGGGCAAATGAAGCAAGCGTCGCCACGCTACTCAAT TGGTGGGCTCGACCTGAACCGCGGCGACGACGTGGAGATGTCCATGGCCC CACTAAATAACAAAATAGATAACAATGCATTCTCCATTTACGAGGCGGCC CGCAATCGCATTGAGCGTCCTTCGCTGACCAACCGACTCGTAGTTGGACG CTCAAATAGCACCAAGGAGCCTCTCGAGCGCCGCCACCGCGACACAGTAA GCACAAGTAAACTCCCAGAATCGCTGCGGTCTCGTCTGTTTGTCGGTAAG AGAGATCCTCACATTTCTCATGGCATCTACGCCAACGAGAACCGGAGAAA GGCTGTTGGTGGCGGTGGTGGTAGTGATAGCGATAGCGGTACTGATAGTG ATGGTGATGCAGCTGCTCCATCGAAGAACAAGCGCCGTTCGCCATCCCCA TTGTCGCTGCGTACGTCGAACACAAAGGATGGATACCGCCTGCTGGTGAG CAATCTGCATACTAACGTGACTACTGCGGATATTCGCGAGCTTTTTAGCG ACATCGGCCCAGTGTACGACGCTCGTGTGGTGCGTCCCGGCACCGCCGAA GTTATTTACAAGTCACTGGAACATGCCGAGAAGGCCGTAGATACCTATCA CCATCGTCAGTTCGATGACCAGCCCATGCACTGTGTGCTGGTCAATCCGC ACTCCTCCCGTCGCTCGGTGCACAAGGCCAGCTCTCGCACCGTGACCACA AACTCGTCTGGCGTGGAGGTGGACATCGATGCACTTCACTCGGTACTCTT CAGGGCCCGCTAGGAAGTGCGAGGCAGAGCCCGGGAACTACAGCAACTAG ATAATTTTTTCTATTTAGTTCAACAACGTAATCCATTTTCATTTCGCGCT TATAAAATTCGAGTCGATCCATCCAGCGTATGTTTAGCAAACTAGACTAG TTTAAGTGAATTCTGCCATGTCTGTCCACTTTAGAATTTTGTGTTTAGTG AGTAAAATTTTTGTCTTATTATCATAGAAATTCAGCAGTCCCACTATAGA CACAACAAAATGTATGGTATAGAAACTGATTTTACAATTGCTTGTATAAT ATTTCATAAAATGTACAGTTTTTAAATTTCATAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6961-RA | 2052 | CG6961-RA | 221..2052 | 1..1832 | 9160 | 100 | Plus |
CG18259-RA | 2122 | CG18259-RA | 56..1611 | 4..1559 | 7495 | 98.7 | Plus |
nc_24642.a | 680 | nc_24642.a | 1..332 | 1228..1559 | 1600 | 98.7 | Plus |
CG18259-RA | 2122 | CG18259-RA | 1637..1730 | 1562..1655 | 380 | 93.6 | Plus |
nc_24642.a | 680 | nc_24642.a | 358..451 | 1562..1655 | 380 | 93.6 | Plus |
CG18259-RA | 2122 | CG18259-RA | 1775..1899 | 1659..1783 | 295 | 82.4 | Plus |
nc_24642.a | 680 | nc_24642.a | 496..620 | 1659..1783 | 295 | 82.4 | Plus |
CG18259-RA | 2122 | CG18259-RA | 2000..2054 | 1782..1836 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18675698..18676440 | 1431..689 | 3715 | 100 | Minus |
chrX | 22417052 | chrX | 18671010..18671752 | 1431..689 | 3640 | 99.3 | Minus |
chrX | 22417052 | chrX | 18676497..18677017 | 689..169 | 2605 | 100 | Minus |
chrX | 22417052 | chrX | 18671809..18672329 | 689..169 | 2545 | 99.2 | Minus |
chrX | 22417052 | chrX | 18675241..18675643 | 1832..1430 | 2015 | 100 | Minus |
chrX | 22417052 | chrX | 18677080..18677247 | 168..1 | 840 | 100 | Minus |
chrX | 22417052 | chrX | 18672392..18672556 | 168..4 | 780 | 98.2 | Minus |
chrX | 22417052 | chrX | 18670826..18670955 | 1559..1430 | 590 | 96.9 | Minus |
chrX | 22417052 | chrX | 18670707..18670800 | 1655..1562 | 395 | 94.7 | Minus |
chrX | 22417052 | chrX | 18670538..18670662 | 1783..1659 | 280 | 81.6 | Minus |
chrX | 22417052 | chrX | 18670387..18670437 | 1832..1782 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18786599..18787341 | 1431..689 | 3715 | 100 | Minus |
X | 23542271 | X | 18781914..18782656 | 1431..689 | 3610 | 99.1 | Minus |
X | 23542271 | X | 18787398..18787918 | 689..169 | 2605 | 100 | Minus |
X | 23542271 | X | 18782713..18783233 | 689..169 | 2530 | 99 | Minus |
X | 23542271 | X | 18786138..18786544 | 1836..1430 | 2035 | 100 | Minus |
X | 23542271 | X | 18787981..18788148 | 168..1 | 840 | 100 | Minus |
X | 23542271 | X | 18783296..18783460 | 168..4 | 780 | 98.2 | Minus |
X | 23542271 | X | 18781730..18781859 | 1559..1430 | 590 | 96.9 | Minus |
X | 23542271 | X | 18781611..18781704 | 1655..1562 | 380 | 93.6 | Minus |
X | 23542271 | X | 18781442..18781566 | 1783..1659 | 295 | 82.4 | Minus |
X | 23542271 | X | 18781287..18781341 | 1836..1782 | 275 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18794697..18795439 | 1431..689 | 3715 | 100 | Minus |
X | 23527363 | X | 18790012..18790754 | 1431..689 | 3610 | 99 | Minus |
X | 23527363 | X | 18795496..18796016 | 689..169 | 2605 | 100 | Minus |
X | 23527363 | X | 18790811..18791331 | 689..169 | 2530 | 99 | Minus |
X | 23527363 | X | 18794236..18794642 | 1836..1430 | 2035 | 100 | Minus |
X | 23527363 | X | 18796079..18796246 | 168..1 | 840 | 100 | Minus |
X | 23527363 | X | 18791394..18791558 | 168..4 | 780 | 98.1 | Minus |
X | 23527363 | X | 18789828..18789957 | 1559..1430 | 590 | 96.9 | Minus |
X | 23527363 | X | 18789709..18789802 | 1655..1562 | 380 | 93.6 | Minus |
X | 23527363 | X | 18789540..18789664 | 1783..1659 | 295 | 82.4 | Minus |
X | 23527363 | X | 18789385..18789439 | 1836..1782 | 275 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 4001..4068 | 1827..1760 | 124 | 64.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18675698..18676019 | 1110..1431 | 100 | == | Minus |
chrX | 18675255..18675641 | 1432..1818 | 100 | <- | Minus |
chrX | 18676073..18676439 | 690..1056 | 100 | <- | Minus |
chrX | 18676497..18677017 | 169..689 | 100 | <- | Minus |
chrX | 18677080..18677247 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 1..1425 | 89..1513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 1..1425 | 89..1513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 1..1425 | 89..1513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 1..1425 | 89..1513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 1..1425 | 89..1513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 58..1889 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 58..1889 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 63..1894 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 58..1889 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6961-RA | 63..1894 | 1..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18786142..18786542 | 1432..1832 | 100 | <- | Minus |
X | 18786599..18787340 | 690..1431 | 100 | <- | Minus |
X | 18787398..18787918 | 169..689 | 100 | <- | Minus |
X | 18787981..18788148 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18786142..18786542 | 1432..1832 | 100 | <- | Minus |
X | 18786599..18787340 | 690..1431 | 100 | <- | Minus |
X | 18787398..18787918 | 169..689 | 100 | <- | Minus |
X | 18787981..18788148 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18786142..18786542 | 1432..1832 | 100 | <- | Minus |
X | 18786599..18787340 | 690..1431 | 100 | <- | Minus |
X | 18787398..18787918 | 169..689 | 100 | <- | Minus |
X | 18787981..18788148 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18680175..18680575 | 1432..1832 | 100 | <- | Minus |
arm_X | 18680632..18681373 | 690..1431 | 100 | <- | Minus |
arm_X | 18681431..18681951 | 169..689 | 100 | <- | Minus |
arm_X | 18682014..18682181 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18794240..18794640 | 1432..1832 | 100 | <- | Minus |
X | 18794697..18795438 | 690..1431 | 100 | <- | Minus |
X | 18795496..18796016 | 169..689 | 100 | <- | Minus |
X | 18796079..18796246 | 1..168 | 100 | Minus |
Translation from 88 to 1512
> LD35981.pep MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARG SHSDMPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLER KKARSAGPILIDDEEESFEPSHRARGKGVHIGQFGHRLSMSNHADGTIQA KWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLED EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSI YEAARNRIERPSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRL FVGKRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRR SPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRP GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSR TVTTNSSGVEVDIDALHSVLFRAR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19217-PA | 497 | GF19217-PA | 1..497 | 1..474 | 1285 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18092-PA | 474 | GG18092-PA | 1..474 | 1..474 | 1687 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12198-PA | 470 | GH12198-PA | 1..470 | 1..474 | 1104 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6961-PA | 474 | CG6961-PA | 1..474 | 1..474 | 2449 | 100 | Plus |
CG18259-PA | 474 | CG18259-PA | 1..474 | 1..474 | 2421 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10924-PA | 466 | GI10924-PA | 1..466 | 1..474 | 991 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27008-PA | 504 | GL27008-PA | 4..504 | 3..474 | 1095 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19986-PA | 481 | GA19986-PA | 4..481 | 3..474 | 1126 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22784-PA | 474 | GM22784-PA | 1..474 | 1..474 | 2123 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15615-PA | 475 | GD15615-PA | 1..475 | 1..474 | 2090 | 89.5 | Plus |
Dsim\GD15616-PA | 435 | GD15616-PA | 1..435 | 1..474 | 1724 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18567-PA | 460 | GJ18567-PA | 1..460 | 1..474 | 1083 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24943-PA | 449 | GK24943-PA | 1..449 | 1..474 | 888 | 46.2 | Plus |
Dwil\GK24883-PA | 652 | GK24883-PA | 361..652 | 184..474 | 590 | 46.3 | Plus |
Dwil\GK24941-PA | 256 | GK24941-PA | 148..253 | 366..471 | 295 | 53.8 | Plus |
Dwil\GK24883-PA | 652 | GK24883-PA | 1..81 | 1..102 | 225 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15488-PA | 472 | GE15488-PA | 1..472 | 1..474 | 1693 | 71.5 | Plus |
Translation from 88 to 1512
> LD35981.hyp MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARG SHSDMPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLER KKARSAGPILIDDEEESFEPSHRARGKGVHIGQFGHRLSMSNHADGTIQA KWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLED EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSI YEAARNRIERPSLTNRLVVGRSNSTKEPLERRHRDTVSTSKLPESLRSRL FVGKRDPHISHGIYANENRRKAVGGGGGSDSDSGTDSDGDAAAPSKNKRR SPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRP GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSR TVTTNSSGVEVDIDALHSVLFRAR*