Clone LD35990 Report

Search the DGRC for LD35990

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:359
Well:90
Vector:pOT2
Associated Gene/TranscriptCep135-RA
Protein status:LD35990.pep: gold
Preliminary Size:3769
Sequenced Size:3423

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17081 2001-01-01 Release 2 assignment
CG17081 2001-07-04 Blastp of sequenced clone
CG17081 2003-01-01 Sim4 clustering to Release 3
CG17081 2008-04-29 Release 5.5 accounting
CG17081 2008-08-15 Release 5.9 accounting
CG17081 2008-12-18 5.12 accounting

Clone Sequence Records

LD35990.complete Sequence

3423 bp (3423 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051863

> LD35990.complete
ATTTGATTGAATAGCATTGTTTTCATTGCGCATTTTCTGAAATTTAGGGC
ATTTAGGAGAAAACTTGTGATTTTTTTGCTGTTATTAGTGTTTTCCCATG
AATATCAACGATGGTGACTTTAAAGACCTCCGCTGCAAACTGGACATCAT
GGGTTTCACACAGACGCTGCCCGTTTTGGCCATTCCACTGGTTCAGGCTG
TTTTCGGGGACCTAATCAAGACCACAGAATGTTTGAGGGATACCAAGAAA
AAGGTGGCCGAGCTGCTGGAGGAAAAGACCTGTTGGGAGCTGGGCGTCGA
ACCCTACAAGTGTGACAACTCTCGCCTGCTGGCCGAGTGCAATGAACTGC
ATCTCCAGTTTTTGAGGGACAGGGAGGACTACGAGCTGCGCCTGTGTGAG
TCCGAGCGAAAGATCCGAAATCTGGAGTTGGACAAGCAGCATTTGCAGAG
TCACAACGATGGACTTCAAAGGCAACTGGACGCTTTGCTTACCAAGCAAA
TGGTTTCATCAGTCACGAACAAAAAGGCGACAGCTGGCATTGGACGTCAG
ACCAAAAAACCCTTTATAACCACAGTGCGTTCGGGCATTGCGATGCCAAC
TACACTGGGCACTAGCAGCAGTGCTCTTAAATGCACAAAATGCAATGCTG
GGGTATTCCAGAAGACCACCACAACGACCAAAGACGGTGTGACAGTGACG
CAAACCAGTGGACAGGAGGAGTTAGACAAGATGCAGAATGATCTTACGGC
AGCCGGAGAACAACTGGAGTTCTTCAAGCGCAAAGTGGAGGCCAGAAATC
GGGAGATTCGCCGCTTAAACGACATGCTAGCAGGAGGGCGTCCTTTAGCG
GCTTTGGCCAAGGATTGCTGTTACAAGGACGTGGGCGCCCTCTCCCAGGA
CATCGATCTGTTGCAACGCGAGAAGAGCGATTTAATGATGCAAGTTCGAG
AATTCCAGGACAAGATGCACGATGCTATGCAGCGGGCTCTAAGCTCCGAA
GAGGATAAAATAAAGCTCCAAACGCAGCTGGAGGAGCTCAAGGAAGCTGC
GTTGCAAGTGGAACAGCAGGCCAATGCGGAAATCGATGCCAAGGAATCGG
AACTTAGGCAACTGCAGTTGGAGCTTAAGAAGAAGGGAAAGGATCACCGA
CTGACCGGTGGCTTTGCTTCCAATCAAAGTGACAAGCATAATCTTAATGA
ACGCTTAAATCTTTTGACTCGTCGTGAAGAGGAACTACAGGCCACAAATG
AAAAGCATAAGAAGAAAATTCAGAAAATGCAAGCAAAGATATTAGAACTG
CAGAAGGAGCTCAAAGATCAGAATAAACATTCCAACGTCACCCTGGATGA
AGAGAAAATACGCCTGTCATCAGAGCGGGACTTCTTCCAGAAGGAGTATC
TGCGTCTGATGAGCAAGACCGGATCCGAGTCGGAGATCGCCTTCTTGCAT
GCCCAAATTAAATCTAAGGACGAGGAGTTAAAGGCCCTGCGATCTGAACT
GTTTCATGGAGGAAAGCAGCAATTTTCCCCACAAAAAAGTGTGCAGTATG
AGACACTGCCGCCCCCCACAGCTTCATCCATTACCTCCACCGTTACTAGC
AATACGAGTGACTGCGTCCAGGCGGCCATTGCAAGGGTGGAGCGGGAACG
GGATTGCGCCAGGACCGAGCTAGAAAGGGTTCGTTGCGAGCGGGATACGC
TGAGGGAGAAGCAACTGAGCACTGTTCAACTTCATGCCGATGAGCTACAG
GCTCTGCGCCTGCGAAACGAAGAGCTTAACGATCGCCTGCGGCAAATGGA
ACGCGATAATCGGGAACTTAACTCGGCTCGTCTGCCAACTGAAACGAATC
TGGTGCTGCTTAAGGAGGACTTGTTGCAAATGAGGCAGCGTGTGGCATCT
ATGCAAACCGAAATTGACCAACTAAAGACCGAAAATGATCAAATAACCAT
GCTCAACGATCAAAACGAGCGCATCATAGCGGATTATCAGAGTAAACTTT
TGGTGGCCGAGCGTCAACGACAGTCGGCGGATGTTCGGGCCAGCACCTTG
GACTCCAGTCGGGAATCCAATCGCAGCGAGGTTACCCAACTCCGCATGGA
CTTAGGAGCTCTGCGGCAGACCTATATATCGTTAGAACACGAGAAGGATA
CGCTTCTGCATCAATTGGATACCAAAACTGAGCGGGTATACAAACTGGAG
TATGAGCTAAAGGATTGCAAAGAAAAACGGAATGCCCTAGAGCAGAATGT
GAAGGACCTGGAGGATCAATTGCGAAAACTGGCGAACAGGAACCGGCAGC
GCGACTCAGAACTGACGGAGACCTCGACGGAAAGTAAAACACTGCGCCAG
CAGATTGTGGCACTCAAAGCCAGTCGCGATGAGGCAATAGCAGAGAATCG
CCGGCTGATGGACAAATTGAGCGATGCCCAAGTGGAGGCCAGGACGTTGC
AGAAGAAGCTGACGGATTCCGAGCTTCAGGTGGCCAACATGAAGCAGCAG
CTGCACAAGTACGTCCAGGAGGTCAAGAAGGCCGAGGATTTGCTCATCCA
GAAGGAAAAGGAGCGCGATGATATGCTGGATCAGTACCACTGTCTAACCC
AGGGCCAAGCTACACTGGAGGGTAATAACCAAAGTCTGGAGTGCGAGGCG
GTTGAGTTCAGGCGACAGATCTGTGAGCTGGAGTGCGAGGTGCACAGCCT
GAAGGAACAACTGCAGCTTCGCCAGTGCGCACTTCATGATATGGAGGTGC
AGCTGACCGCCGCTCGGGCTTCAGTGCGTTGTTTGGAAAGGGAGCTGGAG
AATGCCCGAGATGACATCCGTGTCCAGAAGGTGGATCTTGAGGCGCGCAA
GGAGCTGTGTGATAAGTTGGATGTGGAAAGAAGCAAACTCAATGCGGAGC
TGAATGATGTGAATGAAATTCGCAAAAAGCTTGAAAAACAATGCGAAAAA
CTGCGCGATGAGCTTCAGCAGAGCTTGGCCATTAATCAGGTCACCAACGA
AACCACTGATCTCATGCTCGGGCGCTTGCACAATGATCAGCAGCATCAGG
AGGACGATGATATTAGGTCCAAACATGAAATGGACCGATTGCAACGTCAG
CTCCAGCAAACATTGGATCAGTTGCAGGAGGAGCGTGTCCGCTGCAGGCA
CCACGAGGAGTTGGCTGAAAAGTGGGAGCAACAGGTACGCGATCTGCGTC
GAAATCTCGCCGATGATCGCTACAATCAGGCTAGGACACGTGAGGTTAGC
CCCCGGGTGCCATCGAAGACTCTTTAATTGATAGTATACTTATGCATACG
CTTCTTGTTTATTATGTTAACTCAAATTTATTGTTTGGCTGGGTTATCGA
AATTGTAAAAATATAAGATTGTCAAAAATAAATAAAGATTTAATGCAACG
AAAAAAAAAAAAAAAAAAAAAAA

LD35990.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Cep135-RA 3490 Cep135-RA 91..3490 1..3400 17000 100 Plus
CG13457.a 3244 CG13457.a 3148..3244 3401..3305 485 100 Minus
CG13457-RB 3364 CG13457-RB 3268..3364 3401..3305 485 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15107991..15109386 552..1947 6830 99.3 Plus
chr3L 24539361 chr3L 15117795..15118080 3115..3400 1430 100 Plus
chr3L 24539361 chr3L 15117065..15117335 2659..2929 1355 100 Plus
chr3L 24539361 chr3L 15109455..15109665 1948..2158 1040 99.5 Plus
chr3L 24539361 chr3L 15117515..15117703 2928..3116 945 100 Plus
chr3L 24539361 chr3L 15106843..15107040 1..197 925 99 Plus
chr3L 24539361 chr3L 15116544..15116699 2400..2555 780 100 Plus
chr3L 24539361 chr3L 15107740..15107893 398..551 755 99.4 Plus
chr3L 24539361 chr3L 15107552..15107680 270..398 645 100 Plus
chr3L 24539361 chr3L 15116266..15116392 2274..2400 635 100 Plus
chr3L 24539361 chr3L 15109725..15109841 2158..2274 585 100 Plus
chr3L 24539361 chr3L 15116769..15116879 2552..2662 555 100 Plus
chr3L 24539361 chr3L 15107098..15107176 194..272 395 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:30:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15117911..15119306 552..1947 6980 100 Plus
3L 28110227 3L 15127744..15128030 3115..3401 1435 100 Plus
3L 28110227 3L 15127014..15127284 2659..2929 1355 100 Plus
3L 28110227 3L 15119375..15119585 1948..2158 1055 100 Plus
3L 28110227 3L 15116764..15116960 1..197 985 100 Plus
3L 28110227 3L 15127464..15127652 2928..3116 945 100 Plus
3L 28110227 3L 15126493..15126648 2400..2555 780 100 Plus
3L 28110227 3L 15117660..15117813 398..551 770 100 Plus
3L 28110227 3L 15117472..15117600 270..398 645 100 Plus
3L 28110227 3L 15126215..15126341 2274..2400 635 100 Plus
3L 28110227 3L 15119647..15119763 2158..2274 585 100 Plus
3L 28110227 3L 15126718..15126828 2552..2662 555 100 Plus
3L 28110227 3L 15117018..15117096 194..272 395 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15111011..15112406 552..1947 6980 100 Plus
3L 28103327 3L 15120844..15121130 3115..3401 1435 100 Plus
3L 28103327 3L 15120114..15120384 2659..2929 1355 100 Plus
3L 28103327 3L 15112475..15112685 1948..2158 1055 100 Plus
3L 28103327 3L 15109864..15110060 1..197 985 100 Plus
3L 28103327 3L 15120564..15120752 2928..3116 945 100 Plus
3L 28103327 3L 15119593..15119748 2400..2555 780 100 Plus
3L 28103327 3L 15110760..15110913 398..551 770 100 Plus
3L 28103327 3L 15110572..15110700 270..398 645 100 Plus
3L 28103327 3L 15119315..15119441 2274..2400 635 100 Plus
3L 28103327 3L 15112747..15112863 2158..2274 585 100 Plus
3L 28103327 3L 15119818..15119928 2552..2662 555 100 Plus
3L 28103327 3L 15110118..15110196 194..272 395 100 Plus
Blast to na_te.dros performed on 2019-03-15 19:39:44 has no hits.

LD35990.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:40:27 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15107741..15107893 399..551 99 -> Plus
chr3L 15106843..15107039 1..196 98 -> Plus
chr3L 15107101..15107175 197..271 100 -> Plus
chr3L 15107554..15107680 272..398 100 -> Plus
chr3L 15107991..15109386 552..1947 99 -> Plus
chr3L 15109455..15109665 1948..2158 99 -> Plus
chr3L 15109726..15109841 2159..2274 100 -> Plus
chr3L 15116267..15116392 2275..2400 100 -> Plus
chr3L 15116545..15116698 2401..2554 100 -> Plus
chr3L 15116772..15116878 2555..2661 100 -> Plus
chr3L 15117068..15117335 2662..2929 100 -> Plus
chr3L 15117517..15117702 2930..3115 100 -> Plus
chr3L 15117796..15118080 3116..3400 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:17:35 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
CG17081-RA 1..3180 98..3277 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:18:01 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 1..3180 98..3277 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:00:15 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 1..3180 98..3277 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:49:31 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
CG17081-RA 1..3180 98..3277 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:49 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 1..3180 98..3277 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:17:34 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
CG17081-RA 26..3421 1..3396 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:18:01 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 26..3425 1..3400 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:15 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 28..3427 1..3400 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:49:32 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
CG17081-RA 26..3421 1..3396 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:49 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
Cep135-RA 28..3427 1..3400 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:27 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15119648..15119763 2159..2274 100 -> Plus
3L 15126216..15126341 2275..2400 100 -> Plus
3L 15126494..15126647 2401..2554 100 -> Plus
3L 15126721..15126827 2555..2661 100 -> Plus
3L 15119375..15119585 1948..2158 100 -> Plus
3L 15116764..15116959 1..196 100 -> Plus
3L 15117021..15117095 197..271 100 -> Plus
3L 15117474..15117600 272..398 100 -> Plus
3L 15117661..15117813 399..551 100 -> Plus
3L 15117911..15119306 552..1947 100 -> Plus
3L 15127017..15127284 2662..2929 100 -> Plus
3L 15127466..15127651 2930..3115 100 -> Plus
3L 15127745..15128029 3116..3400 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:27 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15119648..15119763 2159..2274 100 -> Plus
3L 15126216..15126341 2275..2400 100 -> Plus
3L 15126494..15126647 2401..2554 100 -> Plus
3L 15126721..15126827 2555..2661 100 -> Plus
3L 15119375..15119585 1948..2158 100 -> Plus
3L 15116764..15116959 1..196 100 -> Plus
3L 15117021..15117095 197..271 100 -> Plus
3L 15117474..15117600 272..398 100 -> Plus
3L 15117661..15117813 399..551 100 -> Plus
3L 15117911..15119306 552..1947 100 -> Plus
3L 15127017..15127284 2662..2929 100 -> Plus
3L 15127466..15127651 2930..3115 100 -> Plus
3L 15127745..15128029 3116..3400 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:27 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15119648..15119763 2159..2274 100 -> Plus
3L 15126216..15126341 2275..2400 100 -> Plus
3L 15126494..15126647 2401..2554 100 -> Plus
3L 15126721..15126827 2555..2661 100 -> Plus
3L 15119375..15119585 1948..2158 100 -> Plus
3L 15116764..15116959 1..196 100 -> Plus
3L 15117021..15117095 197..271 100 -> Plus
3L 15117474..15117600 272..398 100 -> Plus
3L 15117661..15117813 399..551 100 -> Plus
3L 15117911..15119306 552..1947 100 -> Plus
3L 15127017..15127284 2662..2929 100 -> Plus
3L 15127466..15127651 2930..3115 100 -> Plus
3L 15127745..15128029 3116..3400 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:15 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15110121..15110195 197..271 100 -> Plus
arm_3L 15110574..15110700 272..398 100 -> Plus
arm_3L 15109864..15110059 1..196 100 -> Plus
arm_3L 15110761..15110913 399..551 100 -> Plus
arm_3L 15111011..15112406 552..1947 100 -> Plus
arm_3L 15112475..15112685 1948..2158 100 -> Plus
arm_3L 15112748..15112863 2159..2274 100 -> Plus
arm_3L 15119316..15119441 2275..2400 100 -> Plus
arm_3L 15119594..15119747 2401..2554 100 -> Plus
arm_3L 15119821..15119927 2555..2661 100 -> Plus
arm_3L 15120117..15120384 2662..2929 100 -> Plus
arm_3L 15120566..15120751 2930..3115 100 -> Plus
arm_3L 15120845..15121129 3116..3400 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:27:46 Download gff for LD35990.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15109864..15110059 1..196 100 -> Plus
3L 15110121..15110195 197..271 100 -> Plus
3L 15110574..15110700 272..398 100 -> Plus
3L 15110761..15110913 399..551 100 -> Plus
3L 15111011..15112406 552..1947 100 -> Plus
3L 15112475..15112685 1948..2158 100 -> Plus
3L 15112748..15112863 2159..2274 100 -> Plus
3L 15119316..15119441 2275..2400 100 -> Plus
3L 15119594..15119747 2401..2554 100 -> Plus
3L 15119821..15119927 2555..2661 100 -> Plus
3L 15120117..15120384 2662..2929 100 -> Plus
3L 15120566..15120751 2930..3115 100 -> Plus
3L 15120845..15121129 3116..3400 100   Plus

LD35990.pep Sequence

Translation from 97 to 3276

> LD35990.pep
MNINDGDFKDLRCKLDIMGFTQTLPVLAIPLVQAVFGDLIKTTECLRDTK
KKVAELLEEKTCWELGVEPYKCDNSRLLAECNELHLQFLRDREDYELRLC
ESERKIRNLELDKQHLQSHNDGLQRQLDALLTKQMVSSVTNKKATAGIGR
QTKKPFITTVRSGIAMPTTLGTSSSALKCTKCNAGVFQKTTTTTKDGVTV
TQTSGQEELDKMQNDLTAAGEQLEFFKRKVEARNREIRRLNDMLAGGRPL
AALAKDCCYKDVGALSQDIDLLQREKSDLMMQVREFQDKMHDAMQRALSS
EEDKIKLQTQLEELKEAALQVEQQANAEIDAKESELRQLQLELKKKGKDH
RLTGGFASNQSDKHNLNERLNLLTRREEELQATNEKHKKKIQKMQAKILE
LQKELKDQNKHSNVTLDEEKIRLSSERDFFQKEYLRLMSKTGSESEIAFL
HAQIKSKDEELKALRSELFHGGKQQFSPQKSVQYETLPPPTASSITSTVT
SNTSDCVQAAIARVERERDCARTELERVRCERDTLREKQLSTVQLHADEL
QALRLRNEELNDRLRQMERDNRELNSARLPTETNLVLLKEDLLQMRQRVA
SMQTEIDQLKTENDQITMLNDQNERIIADYQSKLLVAERQRQSADVRAST
LDSSRESNRSEVTQLRMDLGALRQTYISLEHEKDTLLHQLDTKTERVYKL
EYELKDCKEKRNALEQNVKDLEDQLRKLANRNRQRDSELTETSTESKTLR
QQIVALKASRDEAIAENRRLMDKLSDAQVEARTLQKKLTDSELQVANMKQ
QLHKYVQEVKKAEDLLIQKEKERDDMLDQYHCLTQGQATLEGNNQSLECE
AVEFRRQICELECEVHSLKEQLQLRQCALHDMEVQLTAARASVRCLEREL
ENARDDIRVQKVDLEARKELCDKLDVERSKLNAELNDVNEIRKKLEKQCE
KLRDELQQSLAINQVTNETTDLMLGRLHNDQQHQEDDDIRSKHEMDRLQR
QLQQTLDQLQEERVRCRHHEELAEKWEQQVRDLRRNLADDRYNQARTREV
SPRVPSKTL*

LD35990.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23686-PA 1056 GF23686-PA 1..1056 1..1059 4153 77.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15721-PA 1056 GG15721-PA 1..1056 1..1059 4754 91.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14831-PA 1062 GH14831-PA 1..1060 1..1058 3676 70.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Cep135-PA 1059 CG17081-PA 1..1059 1..1059 5335 100 Plus
Cep135-PB 1065 CG17081-PB 1..1065 1..1059 5318 99.4 Plus
Cep135-PC 960 CG17081-PC 1..945 1..945 4739 99.9 Plus
Golgin245-PA 1489 CG3493-PA 369..1331 33..1025 337 19.3 Plus
zip-PH 1964 CG15792-PH 864..1727 206..1045 328 20.5 Plus
zip-PG 1971 CG15792-PG 856..1719 206..1045 328 20.5 Plus
zip-PE 1971 CG15792-PE 856..1719 206..1045 328 20.5 Plus
zip-PC 1971 CG15792-PC 856..1719 206..1045 328 20.5 Plus
zip-PF 1979 CG15792-PF 864..1727 206..1045 328 20.5 Plus
zip-PB 2011 CG15792-PB 896..1759 206..1045 328 20.5 Plus
zip-PD 2016 CG15792-PD 901..1764 206..1045 328 20.5 Plus
zip-PI 2024 CG15792-PI 909..1772 206..1045 328 20.5 Plus
zip-PA 2056 CG15792-PA 941..1804 206..1045 328 20.5 Plus
brp-PI 1397 CG42344-PI 152..1196 37..1037 319 19.7 Plus
brp-PK 1707 CG42344-PK 473..1506 37..1037 314 19.7 Plus
brp-PL 1781 CG42344-PL 473..1580 37..1037 303 19.4 Plus
zip-PH 1964 CG15792-PH 923..1884 206..1057 300 19.6 Plus
zip-PG 1971 CG15792-PG 915..1876 206..1057 300 19.6 Plus
zip-PE 1971 CG15792-PE 915..1876 206..1057 300 19.6 Plus
zip-PC 1971 CG15792-PC 915..1876 206..1057 300 19.6 Plus
zip-PF 1979 CG15792-PF 923..1884 206..1057 300 19.6 Plus
zip-PB 2011 CG15792-PB 955..1916 206..1057 300 19.6 Plus
zip-PD 2016 CG15792-PD 960..1921 206..1057 300 19.6 Plus
zip-PI 2024 CG15792-PI 968..1929 206..1057 300 19.6 Plus
zip-PA 2056 CG15792-PA 1000..1961 206..1057 300 19.6 Plus
CLIP-190-PN 1598 CG5020-PN 251..1022 281..1034 300 20.1 Plus
CLIP-190-PP 1623 CG5020-PP 276..1047 281..1034 300 20.1 Plus
CLIP-190-PC 1652 CG5020-PC 305..1076 281..1034 300 20.1 Plus
CLIP-190-PA 1690 CG5020-PA 343..1114 281..1034 300 20.1 Plus
brp-PH 1740 CG42344-PH 430..1539 37..1037 299 19.3 Plus
brp-PE 1740 CG42344-PE 430..1539 37..1037 299 19.3 Plus
brp-PD 1740 CG42344-PD 430..1539 37..1037 299 19.3 Plus
brp-PG 1786 CG42344-PG 476..1585 37..1037 299 19.3 Plus
brp-PJ 2238 CG42344-PJ 928..2037 37..1037 299 19.3 Plus
CLIP-190-PM 1668 CG5020-PM 327..1092 287..1034 297 20.1 Plus
CLIP-190-PB 1689 CG5020-PB 348..1113 287..1034 297 20.1 Plus
CLIP-190-PR 1601 CG5020-PR 282..1025 270..1034 294 20.6 Plus
brp-PH 1740 CG42344-PH 155..1112 101..1011 292 19.8 Plus
brp-PE 1740 CG42344-PE 155..1112 101..1011 292 19.8 Plus
brp-PD 1740 CG42344-PD 155..1112 101..1011 292 19.8 Plus
brp-PG 1786 CG42344-PG 201..1158 101..1011 292 19.8 Plus
brp-PL 1781 CG42344-PL 201..1153 101..1011 290 19.7 Plus
CLIP-190-PN 1598 CG5020-PN 581..1503 39..957 288 18.3 Plus
CLIP-190-PP 1623 CG5020-PP 606..1528 39..957 288 18.3 Plus
CLIP-190-PC 1652 CG5020-PC 635..1557 39..957 288 18.3 Plus
CLIP-190-PA 1690 CG5020-PA 673..1595 39..957 288 18.3 Plus
CLIP-190-PM 1668 CG5020-PM 651..1573 39..957 288 18.3 Plus
CLIP-190-PB 1689 CG5020-PB 672..1594 39..957 288 18.3 Plus
CLIP-190-PR 1601 CG5020-PR 584..1506 39..957 288 18.3 Plus
CLIP-190-PS 1653 CG5020-PS 636..1558 39..957 288 18.3 Plus
CLIP-190-PS 1653 CG5020-PS 404..1077 378..1034 285 21 Plus
Mhc-PU 1949 CG17927-PU 877..1833 54..1045 285 21 Plus
Mhc-PN 1949 CG17927-PN 877..1833 54..1045 285 21 Plus
Mhc-PE 1962 CG17927-PE 877..1833 54..1045 285 21 Plus
Mhc-PH 1962 CG17927-PH 877..1833 54..1045 285 21 Plus
Mhc-PT 1962 CG17927-PT 877..1833 54..1045 285 21 Plus
Mhc-PO 1962 CG17927-PO 877..1833 54..1045 285 21 Plus
Mhc-PF 1962 CG17927-PF 877..1833 54..1045 285 21 Plus
Mhc-PQ 1962 CG17927-PQ 877..1833 54..1045 285 21 Plus
Mhc-PI 1962 CG17927-PI 877..1833 54..1045 285 21 Plus
Mhc-PG 1962 CG17927-PG 877..1833 54..1045 285 21 Plus
Mhc-PA 1962 CG17927-PA 877..1833 54..1045 285 21 Plus
Mhc-PD 1962 CG17927-PD 877..1833 54..1045 285 21 Plus
Mhc-PC 1962 CG17927-PC 877..1833 54..1045 285 21 Plus
Mhc-PR 1962 CG17927-PR 877..1833 54..1045 285 21 Plus
Mhc-PL 1936 CG17927-PL 944..1833 207..1045 284 19.4 Plus
Mhc-PM 1936 CG17927-PM 944..1833 207..1045 284 19.4 Plus
Mhc-PK 1936 CG17927-PK 944..1833 207..1045 284 19.4 Plus
Mhc-PP 1949 CG17927-PP 944..1833 207..1045 284 19.4 Plus
Mhc-PV 1962 CG17927-PV 944..1833 207..1045 284 19.4 Plus
Mhc-PS 1962 CG17927-PS 944..1833 207..1045 284 19.4 Plus
Mhc-PB 1962 CG17927-PB 944..1833 207..1045 284 19.4 Plus
brp-PJ 2238 CG42344-PJ 865..1610 207..1011 283 19.4 Plus
Golgin245-PA 1489 CG3493-PA 340..1222 206..1049 282 19.3 Plus
CG18304-PC 1813 CG18304-PC 269..1282 137..1036 281 19.7 Plus
CG18304-PC 1813 CG18304-PC 683..1480 76..824 275 22.6 Plus
Golgin245-PA 1489 CG3493-PA 160..877 364..1050 274 21.9 Plus
CLIP-190-PN 1598 CG5020-PN 449..1439 55..1003 274 19 Plus
CLIP-190-PP 1623 CG5020-PP 474..1464 55..1003 274 19 Plus
CLIP-190-PC 1652 CG5020-PC 503..1493 55..1003 274 19 Plus
CLIP-190-PA 1690 CG5020-PA 541..1531 55..1003 274 19 Plus
CLIP-190-PM 1668 CG5020-PM 519..1509 55..1003 274 19 Plus
CLIP-190-PB 1689 CG5020-PB 540..1530 55..1003 274 19 Plus
CLIP-190-PR 1601 CG5020-PR 452..1442 55..1003 274 19 Plus
CLIP-190-PS 1653 CG5020-PS 504..1494 55..1003 274 19 Plus
zip-PG 1971 CG15792-PG 995..1929 39..1047 273 19.3 Plus
zip-PE 1971 CG15792-PE 995..1929 39..1047 273 19.3 Plus
zip-PC 1971 CG15792-PC 995..1929 39..1047 273 19.3 Plus
zip-PF 1979 CG15792-PF 1003..1937 39..1047 273 19.3 Plus
zip-PB 2011 CG15792-PB 1035..1969 39..1047 273 19.3 Plus
zip-PD 2016 CG15792-PD 1040..1974 39..1047 273 19.3 Plus
zip-PI 2024 CG15792-PI 1048..1982 39..1047 273 19.3 Plus
zip-PA 2056 CG15792-PA 1080..2014 39..1047 273 19.3 Plus
brp-PK 1707 CG42344-PK 201..1062 101..1029 273 20.4 Plus
zip-PH 1964 CG15792-PH 1003..1927 39..1033 272 19.5 Plus
CLIP-190-PS 1653 CG5020-PS 314..1212 133..1032 271 19.7 Plus
CLIP-190-PN 1598 CG5020-PN 393..1157 293..1032 270 20.2 Plus
CLIP-190-PP 1623 CG5020-PP 418..1182 293..1032 270 20.2 Plus
CLIP-190-PC 1652 CG5020-PC 447..1211 293..1032 270 20.2 Plus
CLIP-190-PA 1690 CG5020-PA 485..1249 293..1032 270 20.2 Plus
CLIP-190-PM 1668 CG5020-PM 463..1227 293..1032 270 20.2 Plus
CLIP-190-PB 1689 CG5020-PB 484..1248 293..1032 270 20.2 Plus
CLIP-190-PR 1601 CG5020-PR 396..1160 293..1032 270 20.2 Plus
Mhc-PL 1936 CG17927-PL 907..1711 272..1028 267 21 Plus
Mhc-PM 1936 CG17927-PM 907..1711 272..1028 267 21 Plus
Mhc-PK 1936 CG17927-PK 907..1711 272..1028 267 21 Plus
Mhc-PP 1949 CG17927-PP 907..1711 272..1028 267 21 Plus
Mhc-PV 1962 CG17927-PV 907..1711 272..1028 267 21 Plus
Mhc-PS 1962 CG17927-PS 907..1711 272..1028 267 21 Plus
Mhc-PB 1962 CG17927-PB 907..1711 272..1028 267 21 Plus
brp-PI 1397 CG42344-PI 9..752 222..1029 261 20.4 Plus
brp-PI 1397 CG42344-PI 89..915 207..1011 260 19.1 Plus
brp-PL 1781 CG42344-PL 161..858 323..1041 247 19.8 Plus
brp-PI 1397 CG42344-PI 398..1381 51..1049 243 18.9 Plus
brp-PK 1707 CG42344-PK 708..1691 51..1049 243 18.9 Plus
brp-PI 1397 CG42344-PI 8..724 364..1057 240 19.4 Plus
brp-PH 1740 CG42344-PH 115..935 323..1040 232 20 Plus
brp-PE 1740 CG42344-PE 115..935 323..1040 232 20 Plus
brp-PD 1740 CG42344-PD 115..935 323..1040 232 20 Plus
brp-PG 1786 CG42344-PG 161..981 323..1040 232 20 Plus
brp-PL 1781 CG42344-PL 946..1765 208..1049 231 19 Plus
brp-PH 1740 CG42344-PH 905..1724 208..1049 231 19 Plus
brp-PE 1740 CG42344-PE 905..1724 208..1049 231 19 Plus
brp-PD 1740 CG42344-PD 905..1724 208..1049 231 19 Plus
brp-PG 1786 CG42344-PG 951..1770 208..1049 231 19 Plus
brp-PJ 2238 CG42344-PJ 1403..2222 208..1049 231 19 Plus
Mhc-PL 1936 CG17927-PL 850..1597 369..1010 229 19.8 Plus
Mhc-PM 1936 CG17927-PM 850..1597 369..1010 229 19.8 Plus
Mhc-PK 1936 CG17927-PK 850..1597 369..1010 229 19.8 Plus
Mhc-PP 1949 CG17927-PP 850..1597 369..1010 229 19.8 Plus
Mhc-PV 1962 CG17927-PV 850..1597 369..1010 229 19.8 Plus
Mhc-PS 1962 CG17927-PS 850..1597 369..1010 229 19.8 Plus
Mhc-PB 1962 CG17927-PB 850..1597 369..1010 229 19.8 Plus
Mhc-PL 1936 CG17927-PL 1167..1907 206..905 224 20.8 Plus
Mhc-PM 1936 CG17927-PM 1167..1907 206..905 224 20.8 Plus
Mhc-PK 1936 CG17927-PK 1167..1907 206..905 224 20.8 Plus
Mhc-PP 1949 CG17927-PP 1167..1907 206..905 224 20.8 Plus
Mhc-PV 1962 CG17927-PV 1167..1907 206..905 224 20.8 Plus
Mhc-PS 1962 CG17927-PS 1167..1907 206..905 224 20.8 Plus
Mhc-PB 1962 CG17927-PB 1167..1907 206..905 224 20.8 Plus
Mhc-PU 1949 CG17927-PU 1167..1907 206..905 222 20.9 Plus
Mhc-PN 1949 CG17927-PN 1167..1907 206..905 222 20.9 Plus
Mhc-PE 1962 CG17927-PE 1167..1907 206..905 222 20.9 Plus
Mhc-PH 1962 CG17927-PH 1167..1907 206..905 222 20.9 Plus
Mhc-PT 1962 CG17927-PT 1167..1907 206..905 222 20.9 Plus
Mhc-PO 1962 CG17927-PO 1167..1907 206..905 222 20.9 Plus
Mhc-PF 1962 CG17927-PF 1167..1907 206..905 222 20.9 Plus
Mhc-PQ 1962 CG17927-PQ 1167..1907 206..905 222 20.9 Plus
Mhc-PI 1962 CG17927-PI 1167..1907 206..905 222 20.9 Plus
Mhc-PG 1962 CG17927-PG 1167..1907 206..905 222 20.9 Plus
Mhc-PA 1962 CG17927-PA 1167..1907 206..905 222 20.9 Plus
Mhc-PD 1962 CG17927-PD 1167..1907 206..905 222 20.9 Plus
Mhc-PC 1962 CG17927-PC 1167..1907 206..905 222 20.9 Plus
Mhc-PR 1962 CG17927-PR 1167..1907 206..905 222 20.9 Plus
Mhc-PU 1949 CG17927-PU 850..1597 369..1010 220 19.7 Plus
Mhc-PN 1949 CG17927-PN 850..1597 369..1010 220 19.7 Plus
Mhc-PE 1962 CG17927-PE 850..1597 369..1010 220 19.7 Plus
Mhc-PH 1962 CG17927-PH 850..1597 369..1010 220 19.7 Plus
Mhc-PT 1962 CG17927-PT 850..1597 369..1010 220 19.7 Plus
Mhc-PO 1962 CG17927-PO 850..1597 369..1010 220 19.7 Plus
Mhc-PF 1962 CG17927-PF 850..1597 369..1010 220 19.7 Plus
Mhc-PQ 1962 CG17927-PQ 850..1597 369..1010 220 19.7 Plus
Mhc-PI 1962 CG17927-PI 850..1597 369..1010 220 19.7 Plus
Mhc-PG 1962 CG17927-PG 850..1597 369..1010 220 19.7 Plus
Mhc-PA 1962 CG17927-PA 850..1597 369..1010 220 19.7 Plus
Mhc-PD 1962 CG17927-PD 850..1597 369..1010 220 19.7 Plus
Mhc-PC 1962 CG17927-PC 850..1597 369..1010 220 19.7 Plus
Mhc-PR 1962 CG17927-PR 850..1597 369..1010 220 19.7 Plus
Golgin245-PA 1489 CG3493-PA 682..1385 208..787 206 21.4 Plus
brp-PL 1781 CG42344-PL 113..743 455..1015 200 20.3 Plus
brp-PJ 2238 CG42344-PJ 777..1315 544..1041 196 19.3 Plus
brp-PH 1740 CG42344-PH 67..702 455..1015 193 20 Plus
brp-PE 1740 CG42344-PE 67..702 455..1015 193 20 Plus
brp-PD 1740 CG42344-PD 67..702 455..1015 193 20 Plus
brp-PG 1786 CG42344-PG 113..748 455..1015 193 20 Plus
Golgin245-PA 1489 CG3493-PA 99..711 493..1031 188 20.7 Plus
brp-PJ 2238 CG42344-PJ 775..1200 619..1015 173 21.3 Plus
Golgin245-PA 1489 CG3493-PA 906..1406 206..686 166 21.2 Plus
Cep135-PC 960 CG17081-PC 206..749 544..1059 163 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13936-PA 1055 GI13936-PA 1..1050 3..1054 3492 66 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24729-PA 621 GL24729-PA 259..621 361..726 1344 74.3 Plus
Dper\GL24729-PA 621 GL24729-PA 3..366 2..343 1051 61.1 Plus
Dper\GL24738-PA 149 GL24738-PA 52..144 727..819 380 84.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14315-PA 1065 GA14315-PA 1..1065 1..1059 3924 74.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25508-PA 484 GM25508-PA 1..484 243..726 2358 95.7 Plus
Dsec\GM25511-PA 360 GM25511-PA 27..360 726..1059 1511 94.3 Plus
Dsec\GM25507-PA 261 GM25507-PA 1..144 1..144 765 97.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14526-PA 1059 GD14526-PA 1..1059 1..1059 5079 94.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13725-PA 1013 GJ13725-PA 1..1013 3..1059 3447 67.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20399-PA 1058 GK20399-PA 1..1058 1..1059 3853 71.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22052-PA 1059 GE22052-PA 1..1059 1..1059 4817 91.9 Plus

LD35990.hyp Sequence

Translation from 97 to 3276

> LD35990.hyp
MNINDGDFKDLRCKLDIMGFTQTLPVLAIPLVQAVFGDLIKTTECLRDTK
KKVAELLEEKTCWELGVEPYKCDNSRLLAECNELHLQFLRDREDYELRLC
ESERKIRNLELDKQHLQSHNDGLQRQLDALLTKQMVSSVTNKKATAGIGR
QTKKPFITTVRSGIAMPTTLGTSSSALKCTKCNAGVFQKTTTTTKDGVTV
TQTSGQEELDKMQNDLTAAGEQLEFFKRKVEARNREIRRLNDMLAGGRPL
AALAKDCCYKDVGALSQDIDLLQREKSDLMMQVREFQDKMHDAMQRALSS
EEDKIKLQTQLEELKEAALQVEQQANAEIDAKESELRQLQLELKKKGKDH
RLTGGFASNQSDKHNLNERLNLLTRREEELQATNEKHKKKIQKMQAKILE
LQKELKDQNKHSNVTLDEEKIRLSSERDFFQKEYLRLMSKTGSESEIAFL
HAQIKSKDEELKALRSELFHGGKQQFSPQKSVQYETLPPPTASSITSTVT
SNTSDCVQAAIARVERERDCARTELERVRCERDTLREKQLSTVQLHADEL
QALRLRNEELNDRLRQMERDNRELNSARLPTETNLVLLKEDLLQMRQRVA
SMQTEIDQLKTENDQITMLNDQNERIIADYQSKLLVAERQRQSADVRAST
LDSSRESNRSEVTQLRMDLGALRQTYISLEHEKDTLLHQLDTKTERVYKL
EYELKDCKEKRNALEQNVKDLEDQLRKLANRNRQRDSELTETSTESKTLR
QQIVALKASRDEAIAENRRLMDKLSDAQVEARTLQKKLTDSELQVANMKQ
QLHKYVQEVKKAEDLLIQKEKERDDMLDQYHCLTQGQATLEGNNQSLECE
AVEFRRQICELECEVHSLKEQLQLRQCALHDMEVQLTAARASVRCLEREL
ENARDDIRVQKVDLEARKELCDKLDVERSKLNAELNDVNEIRKKLEKQCE
KLRDELQQSLAINQVTNETTDLMLGRLHNDQQHQEDDDIRSKHEMDRLQR
QLQQTLDQLQEERVRCRHHEELAEKWEQQVRDLRRNLADDRYNQARTREV
SPRVPSKTL*

LD35990.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
Cep135-PA 1059 CG17081-PA 1..1059 1..1059 5335 100 Plus
Cep135-PB 1065 CG17081-PB 1..1065 1..1059 5318 99.4 Plus
Cep135-PC 960 CG17081-PC 1..945 1..945 4739 99.9 Plus
Golgin245-PA 1489 CG3493-PA 369..1331 33..1025 337 19.3 Plus
zip-PH 1964 CG15792-PH 864..1727 206..1045 328 20.5 Plus
Golgin245-PA 1489 CG3493-PA 340..1222 206..1049 282 19.3 Plus
Golgin245-PA 1489 CG3493-PA 160..877 364..1050 274 21.9 Plus
Golgin245-PA 1489 CG3493-PA 682..1385 208..787 206 21.4 Plus
Golgin245-PA 1489 CG3493-PA 99..711 493..1031 188 20.7 Plus
Golgin245-PA 1489 CG3493-PA 906..1406 206..686 166 21.2 Plus
Cep135-PC 960 CG17081-PC 206..749 544..1059 163 21.3 Plus