BDGP Sequence Production Resources |
Search the DGRC for LD36009
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | lace-RA |
Protein status: | LD36009.pep: gold |
Preliminary Size: | 2799 |
Sequenced Size: | 2589 |
Gene | Date | Evidence |
---|---|---|
CG4162 | 2001-01-01 | Release 2 assignment |
CG4162 | 2002-04-06 | Blastp of sequenced clone |
CG4162 | 2003-01-01 | Sim4 clustering to Release 3 |
lace | 2008-04-29 | Release 5.5 accounting |
lace | 2008-08-15 | Release 5.9 accounting |
lace | 2008-12-18 | 5.12 accounting |
2589 bp (2589 high quality bases) assembled on 2002-04-06
GenBank Submission: AY095191
> LD36009.complete CAAAACGCATCGATCTCTCCGTAATTTTTTGTCCGCTGAGTAATCGGAAA TCGGCAACGGAATAATGGGCAATTTCGACGGCGATTCTGGAACGGTTTTC GAGCAGAGCTATGCGACGACCAACGGAAACGGAAAGGTGCCGAATGGCAA TGGGGCGGCAGATCTCAGTGCCCCGGAAAAACAGGAACTTCTCCGGAAGT TCTCGGCACCCGCGTACACTGAAATTCGCACGCGACGCTGCCAGCCGAAG CCCGCAAACGACGCCCAGAGTCCCAGCTCGATCAACTACCATCCGGAAAA GAAGTCGATCCCCAATGGGCATGCCTCCATTCTGGATCAGGAGTCCAAGC CCAACCAGGCAGAGGGCAAACTTTCGCCGGAGCTGGAGCACTTCCAGAAA ACCTCCTTTGAGGAGGTGCCTTTGCACACGGCCTGCCTTACGTATTTGGG ATTCTATCTACTGATGATCCTGGGCTACATCAACCAGTTGCTCTTCGTGC CCAAAGTGGCCACCGAGAAGGGTCGGGATGGCTATGTAGCCCTCTACGAT GCCTTCGAAAGCTTCTACTCGAGGTACGTTTACAGGAGAATCAAGGATTG CTGGAACCGACCCATCTGCAGTGTTCCGGGAGACGAACTCACTCTAAAGG ATCGCGTAACCGATGATTATGGATGGAGTTTCAAGTTCACTGGAACGGAG ACACGTTGCTTAAATCTGGGATCCTACAATTACCTGGGATTTGCCGCCGC TACTGGACAGTGTGCTGATGATTCAGAGGAAAGTGCTCGGAGCTCTGGAC TGGCATACTGCAGCTCCCGTTGTGAGCTTGGTGACAACGAGCAGCTGCAA GAGCTGGAGGCTCTAACTGCCAGATACTTTGGCGTGGAGGATGCCATTGT CTTTGGAATGGGTTTCGCCACAAATGCGTTGAACCTTCCCTCACTGCTGG GACCCAACAGTCTTGTGATTAGTGACGAAAAGAATCACGCCTCCATCATT TTGGGACTGCGTTTGTCCGGGGCCACCACCAAGGTCTTTAAGCACAACAA CATGCGCGATCTGGAGCGCGTCCTCCGTCAGGGTGTGTGCTATGGAAATC CCAAAAAAGGTGGTCAGCCATGGGACAAGGTTATGATCTTGGTCGAGGGC ATCTTCAGCATGGAGGGGTCCATAGTCCGTTTGCCCGAGGTTATTGCTCT GAAAAAGAAATACAAAGCATACTTGTATTTGGATGAAGCTCACAGCGTGG GAGCCATGGGTTCCCGTGGACGAGGAGTTACAGATTATTTTAATGTGGAT CCGAAGGAGGTGGACATTCTGATGGGCACCTTCACCAAAAGTTTTGGCAG TGCTGGAGGCTATCTCGCTGGATCCAAGAAACTGATTGACTTTCTCCGCA CCAACAGCCACGCCCATTGTTATGCTGCTTCGATCTCGCCACCCATCGCA CAGCAAATCCTTACCTCCATGAAGACCATTATGGGTGAAGATGGCACTGA CATTGGACGCAAGAAGATCCACCAGCTGGCCAGGAACACACGTTACTTCC GCCGACGTCTGGCTCAGCTGGGAGTGATCACATACGGTCACGAGGACTCC CCAGTCGTGCCCATGCTGGTGTACCTGTTTTCCAAGATTGGCGCTGTGGT TCGCACCTTGACGACTCGCCACATTGCCGCGGTGGGAGCTGGATTCCCGG CCACACCCATCATGGAAGGACGCATCCGATTCTGCCTTTCAGCCGCCCAC ACCAAGGAGCAGCTGGACTTTGCCCTGGAGGCGATAGACGAGATTGCCGA TGATCTGGGCCTAAAGTATTCTCGCAAGCCACGCGATCCGAATCCCGTCA TTTACTAGAATCACACGCACACACATAGAAGTTAAGCTTGGGGAAATGGT AACCTCCCCGATTGGTAAACCAAAACTACAACACAGTCCAGATAGTGCTA AATCAATCACGAACGGTGGCTTACATTGACCAAGTTTCAGTTGCACTGGG CTTCTATTTATGACTAATTCTCTGGTTATATGCCTTAAAAGGGAAGATCA CTACAGCAACAGAAACAAAACACTACAGCACATAGCTTAAATGATAAAAT ATTATTAATTATTTAGCATTTACCTCTACGTAGTTGTTATTGTATATGTA AAATCCAATCGTCTTCTTTGGTCGGCTGCTGCATTTTAAGTATTTATAGA AGAGAAAATGACAGCGCAATGTATTGGGCAAATCAGGGTTTGGTTACTTT TATAGCTAAGCTAAGGGAAGCCCCTTTTTCGTGGGAAAGCCTCGAGCACC TCGCTTCTACCAATTAAGCATACTAAGCTGAGCCAAATGTAACGTCTAAA GAGTCAGCGATACAATTGTAAATCACTATTTGGGTAAGTCTTCGGGGGAC CCAAAAATTGGGTCAACTTTAGGGCATTGTCAGGAAATATATATGTATAA TAATTATGTATTATTGATCTTATTTTTCCACCAAAAAAATAAAGAAATTG TTGCTTTATCTAATAAACTATATTGGAATAGCTTAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lace-RA | 3074 | lace-RA | 71..2605 | 1..2535 | 12675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 15500810..15501922 | 266..1378 | 5535 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 15502394..15503284 | 1641..2531 | 4440 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 15497855..15498122 | 1..268 | 1340 | 100 | Plus |
chr2L | 23010047 | chr2L | 15501985..15502249 | 1377..1641 | 1325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15502114..15503226 | 266..1378 | 5565 | 100 | Plus |
2L | 23513712 | 2L | 15503698..15504592 | 1641..2535 | 4475 | 100 | Plus |
2L | 23513712 | 2L | 15499157..15499424 | 1..268 | 1340 | 100 | Plus |
2L | 23513712 | 2L | 15503289..15503553 | 1377..1641 | 1325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15502114..15503226 | 266..1378 | 5565 | 100 | Plus |
2L | 23513712 | 2L | 15503698..15504592 | 1641..2535 | 4475 | 100 | Plus |
2L | 23513712 | 2L | 15499157..15499424 | 1..268 | 1340 | 100 | Plus |
2L | 23513712 | 2L | 15503289..15503553 | 1377..1641 | 1325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 15497855..15498122 | 1..268 | 100 | -> | Plus |
chr2L | 15500813..15501922 | 269..1378 | 99 | -> | Plus |
chr2L | 15501987..15502249 | 1379..1641 | 100 | -> | Plus |
chr2L | 15502395..15503287 | 1642..2534 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 1..1794 | 65..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 1..1794 | 65..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 1..1794 | 65..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 1..1794 | 65..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 1..1794 | 65..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 48..2581 | 1..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 48..2581 | 1..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 31..2564 | 1..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 48..2581 | 1..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lace-RA | 31..2564 | 1..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15499157..15499424 | 1..268 | 100 | -> | Plus |
2L | 15502117..15503226 | 269..1378 | 100 | -> | Plus |
2L | 15503291..15503553 | 1379..1641 | 100 | -> | Plus |
2L | 15503699..15504591 | 1642..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15499157..15499424 | 1..268 | 100 | -> | Plus |
2L | 15502117..15503226 | 269..1378 | 100 | -> | Plus |
2L | 15503291..15503553 | 1379..1641 | 100 | -> | Plus |
2L | 15503699..15504591 | 1642..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15499157..15499424 | 1..268 | 100 | -> | Plus |
2L | 15502117..15503226 | 269..1378 | 100 | -> | Plus |
2L | 15503291..15503553 | 1379..1641 | 100 | -> | Plus |
2L | 15503699..15504591 | 1642..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 15499157..15499424 | 1..268 | 100 | -> | Plus |
arm_2L | 15502117..15503226 | 269..1378 | 100 | -> | Plus |
arm_2L | 15503291..15503553 | 1379..1641 | 100 | -> | Plus |
arm_2L | 15503699..15504591 | 1642..2534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15499157..15499424 | 1..268 | 100 | -> | Plus |
2L | 15502117..15503226 | 269..1378 | 100 | -> | Plus |
2L | 15503291..15503553 | 1379..1641 | 100 | -> | Plus |
2L | 15503699..15504591 | 1642..2534 | 100 | Plus |
Translation from 64 to 1857
> LD36009.pep MGNFDGDSGTVFEQSYATTNGNGKVPNGNGAADLSAPEKQELLRKFSAPA YTEIRTRRCQPKPANDAQSPSSINYHPEKKSIPNGHASILDQESKPNQAE GKLSPELEHFQKTSFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVAT EKGRDGYVALYDAFESFYSRYVYRRIKDCWNRPICSVPGDELTLKDRVTD DYGWSFKFTGTETRCLNLGSYNYLGFAAATGQCADDSEESARSSGLAYCS SRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSL VISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGG QPWDKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGS RGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHA HCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLA QLGVITYGHEDSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIM EGRIRFCLSAAHTKEQLDFALEAIDEIADDLGLKYSRKPRDPNPVIY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13862-PA | 552 | GF13862-PA | 22..552 | 68..597 | 2607 | 90.6 | Plus |
Dana\GF18993-PA | 557 | GF18993-PA | 1..557 | 1..597 | 2465 | 78.6 | Plus |
Dana\GF24511-PA | 411 | GF24511-PA | 43..407 | 198..581 | 461 | 30.9 | Plus |
Dana\GF11943-PA | 468 | GF11943-PA | 81..399 | 198..515 | 407 | 32.8 | Plus |
Dana\GF12883-PA | 546 | GF12883-PA | 153..515 | 220..597 | 321 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25163-PA | 592 | GG25163-PA | 1..592 | 1..597 | 3135 | 97.5 | Plus |
Dere\GG13887-PA | 417 | GG13887-PA | 49..413 | 198..581 | 459 | 30.4 | Plus |
Dere\GG20359-PA | 468 | GG20359-PA | 55..389 | 174..514 | 419 | 32.1 | Plus |
Dere\GG22911-PA | 537 | GG22911-PA | 144..506 | 220..597 | 321 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13758-PA | 630 | GH13758-PA | 1..630 | 1..597 | 2463 | 73.7 | Plus |
Dgri\GH16379-PA | 420 | GH16379-PA | 52..416 | 198..581 | 468 | 31.4 | Plus |
Dgri\GH20070-PA | 468 | GH20070-PA | 96..394 | 215..519 | 382 | 30.8 | Plus |
Dgri\GH20180-PA | 541 | GH20180-PA | 183..510 | 256..597 | 335 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lace-PB | 597 | CG4162-PB | 1..597 | 1..597 | 3124 | 100 | Plus |
lace-PA | 597 | CG4162-PA | 1..597 | 1..597 | 3124 | 100 | Plus |
CG10361-PA | 417 | CG10361-PA | 49..413 | 198..581 | 451 | 30.4 | Plus |
Spt-I-PC | 468 | CG4016-PC | 96..467 | 215..581 | 408 | 29.6 | Plus |
Spt-I-PA | 468 | CG4016-PA | 96..467 | 215..581 | 408 | 29.6 | Plus |
Spt-I-PB | 468 | CG4016-PB | 96..467 | 215..581 | 408 | 29.6 | Plus |
Alas-PA | 539 | CG3017-PA | 146..508 | 220..597 | 310 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17899-PA | 625 | GI17899-PA | 1..625 | 1..597 | 2480 | 75.2 | Plus |
Dmoj\GI11571-PA | 412 | GI11571-PA | 44..408 | 198..581 | 480 | 31.4 | Plus |
Dmoj\GI18787-PA | 465 | GI18787-PA | 93..346 | 215..469 | 400 | 34.6 | Plus |
Dmoj\GI20706-PA | 538 | GI20706-PA | 145..507 | 220..597 | 343 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26430-PA | 562 | GL26430-PA | 30..562 | 68..597 | 2577 | 88.7 | Plus |
Dper\GL20821-PA | 397 | GL20821-PA | 75..393 | 245..581 | 448 | 33.4 | Plus |
Dper\GL16797-PA | 468 | GL16797-PA | 96..388 | 215..513 | 398 | 32.1 | Plus |
Dper\GL11642-PA | 538 | GL11642-PA | 180..507 | 256..597 | 316 | 27.5 | Plus |
Dper\GL16622-PA | 89 | GL16622-PA | 1..61 | 1..68 | 159 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17997-PA | 593 | GA17997-PA | 1..593 | 1..597 | 2745 | 85 | Plus |
Dpse\GA10272-PA | 417 | GA10272-PA | 49..413 | 198..581 | 481 | 32.2 | Plus |
Dpse\GA24298-PA | 468 | GA24298-PA | 96..349 | 215..469 | 397 | 34.2 | Plus |
Dpse\GA15694-PA | 538 | GA15694-PA | 180..507 | 256..597 | 315 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16091-PA | 597 | GM16091-PA | 1..597 | 1..597 | 3172 | 98.7 | Plus |
Dsec\GM24709-PA | 417 | GM24709-PA | 49..413 | 198..581 | 463 | 30.6 | Plus |
Dsec\GM21446-PA | 468 | GM21446-PA | 55..389 | 174..514 | 403 | 31.5 | Plus |
Dsec\GM16072-PA | 535 | GM16072-PA | 142..504 | 220..597 | 320 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24010-PA | 597 | GD24010-PA | 1..597 | 1..597 | 3181 | 98.8 | Plus |
Dsim\GD12774-PA | 3873 | GD12774-PA | 3505..3869 | 198..581 | 464 | 30.4 | Plus |
Dsim\GD10944-PA | 468 | GD10944-PA | 55..389 | 174..514 | 410 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17404-PA | 621 | GJ17404-PA | 1..621 | 1..597 | 2470 | 76.2 | Plus |
Dvir\GJ11251-PA | 424 | GJ11251-PA | 56..420 | 198..581 | 473 | 31.4 | Plus |
Dvir\GJ21814-PA | 465 | GJ21814-PA | 93..346 | 215..469 | 370 | 33.1 | Plus |
Dvir\GJ19743-PA | 539 | GJ19743-PA | 95..508 | 164..597 | 365 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18137-PA | 621 | GK18137-PA | 1..621 | 1..597 | 2666 | 81.3 | Plus |
Dwil\GK23603-PA | 426 | GK23603-PA | 57..422 | 198..581 | 459 | 31.2 | Plus |
Dwil\GK21908-PA | 467 | GK21908-PA | 85..388 | 203..514 | 407 | 32.4 | Plus |
Dwil\GK15724-PA | 537 | GK15724-PA | 99..512 | 164..597 | 332 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21012-PA | 599 | GE21012-PA | 1..599 | 1..597 | 3096 | 96.5 | Plus |
Dyak\GE20178-PA | 417 | GE20178-PA | 49..413 | 198..581 | 456 | 30.6 | Plus |
Dyak\GE12518-PA | 468 | GE12518-PA | 55..464 | 174..578 | 421 | 29.7 | Plus |
Dyak\Alas-PA | 538 | GE14349-PA | 145..507 | 220..597 | 319 | 26.2 | Plus |
Translation from 64 to 1857
> LD36009.hyp MGNFDGDSGTVFEQSYATTNGNGKVPNGNGAADLSAPEKQELLRKFSAPA YTEIRTRRCQPKPANDAQSPSSINYHPEKKSIPNGHASILDQESKPNQAE GKLSPELEHFQKTSFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKVAT EKGRDGYVALYDAFESFYSRYVYRRIKDCWNRPICSVPGDELTLKDRVTD DYGWSFKFTGTETRCLNLGSYNYLGFAAATGQCADDSEESARSSGLAYCS SRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSL VISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGG QPWDKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGS RGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHA HCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLA QLGVITYGHEDSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIM EGRIRFCLSAAHTKEQLDFALEAIDEIADDLGLKYSRKPRDPNPVIY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lace-PB | 597 | CG4162-PB | 1..597 | 1..597 | 3124 | 100 | Plus |
lace-PA | 597 | CG4162-PA | 1..597 | 1..597 | 3124 | 100 | Plus |
CG10361-PA | 417 | CG10361-PA | 49..413 | 198..581 | 451 | 30.4 | Plus |
Spt-I-PC | 468 | CG4016-PC | 96..467 | 215..581 | 408 | 29.6 | Plus |
Spt-I-PA | 468 | CG4016-PA | 96..467 | 215..581 | 408 | 29.6 | Plus |