BDGP Sequence Production Resources |
Search the DGRC for LD36024
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6398-RA |
Protein status: | LD36024.pep: gold |
Preliminary Size: | 2129 |
Sequenced Size: | 1889 |
Gene | Date | Evidence |
---|---|---|
CG6398 | 2001-01-01 | Release 2 assignment |
CG6398 | 2001-09-19 | Blastp of sequenced clone |
CG6398 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6398 | 2008-04-29 | Release 5.5 accounting |
CG6398 | 2008-08-15 | Release 5.9 accounting |
CG6398 | 2008-12-18 | 5.12 accounting |
1889 bp (1889 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060411
> LD36024.complete CGAACGTTGTTGCGATCACAACGTCTTGGCTATCAGTTCTCCGTCTCTTT GCTGCCCAGATTCAGATTCTCAGTTCTCCGTTCTCAATTCTCCAGCTCAG ATTCTTCGCCGGCGTGCGTGTGTGTGTGTGTAGTGTTGTGAGCGTGTGCA GTGGAGCCCGTGTCAGTGTGTTAGTGCTGGCCCGTTGCTAAAATTATTAT TTTTTTTAACGAACGTTGGCTTTTTTTTTGCTGTGCCTTCCAAACTGGTT GCTGCTCTTTTAACTGTGTATTTGTGCAGCAGCAGTAGCAGTTCAAGAAG AAGCGGCAGAATCTAGCTGCGGAAGAAGAAGACGTCGAAGACGCTAGAGA TCACGAAACGAAAGAAAAATAATAGCAACTGTAGTTGTTGTTTTCTTCTC GGGGATTTTCGTTGGATAAATCCCGTATCATAGCCCCAAAATAGCTGAGA TTTCGAAACAGATCCGGAATAAAACACCAGCATGCCCTGCTCGGCCGTAA CCCTATCTATAGCGACGATCTGCGCGATCATCGCCACCGCCCTGCTGGCG ATCGCCTTCTCCACGGATAATTGGCTGCACTACGATGTCTGGCGCAACCA GATACAGTCCTTTGCCGCCAAGCACTCGGATGCGGAGTCGTTGTTGCACA ACATGAACGTGAAGTACTATTACTACACGAGGACACGAGGCTTGTTCCGG ATCTGCTATCCCAAGGAGCGGCCGCCAGTTTCAGCGGTGCCCACCTATTT GTCACCGATCGAGACACACTGCTCGAACATCGACTACTTCCCGCAGGCGG AGGACGAGAAGATCGCCAACGAGGACGCCACATCGCGTCTCCATTTGGCC CGCTCCTGCATCGCTCTGTTCATCATCAGCTTTGTGACCATCTTCTGTGC GTTCTGGACCGGATTATCCGGCTGCTGGAAGCGGTCGTCGGGCGCCATCA CAGCCACCTCGATACTGCTGCTAGTCACCTGTCTCCTGGCCGCCGGCGCC ATGGGACTCTGGCACACCGTCGAGTTCTTTGAGAAGGAGAAGGTCGTGGG CGAGGATTACTTCCAGCAGTGGAACACGGTCCTGCGCGACAACACGAAGA TCGCCTACGACTGGTCGTACATCGTGGCCTGGGCAGGAATCGGAACCTGT CTCCTGGCGTCCATTCTGCTCTCCGGCGCGGCCGTTTGCCTGCGCAACGA GCGGGAGAAGGAGGAGCAGCTGAACCTGCAGTACCTGATGCCAGTTTACT CGCAGAAGCAGCCACCCTATCCCCCTTATGCCAACTACGCCCAGCCGCAG ATCTACCCAGGACCTTACTATCATGGCTCGCAGTACGGACCCTACAACTA CTAGAGGCACACCCGAAGGGGCCAGCCAGCTTCAGCCAGCAGCTGCAATT GAGTTATAGAGACATAGAGATCACAAATCATGACCAGGAGGGAACCTGGT AGCCCTCCCCAGTAATCAAAATAGAGCAAGCGCTAACGAAATCTTAAAAC GCATACATTCTGACAATGAAAATATTACTTAAAGCATCAATTTTTTTTTT CGACAAGAATCTAGTTTGTAGTCTATATAGAGCTATATAGTATATATATA TATGCTTGTATGTATAACTGATCGTGGGACTTGAGTCAAAGTTGCGTCCA AGTTTTTGGTGCGCGAATTGTTTGCGCGTTATTTTGCAAATATCTAAGAG AGACGAATGGATGGATGGTTTTATATGTTGACCACGGCGAGATGGCGATT TAAAGACGGAACAATAAAGAGTTAATTTATTGTAGCACGTAACGTACATG TAGCGTATCTAAAATAATAATAAAGAAATATGTGTATGTATCTAAGCTAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6398-RA | 2115 | CG6398-RA | 100..1951 | 1..1852 | 9260 | 100 | Plus |
CG6398.b | 1752 | CG6398.b | 180..1752 | 280..1852 | 7865 | 100 | Plus |
CG6398.a | 1749 | CG6398.a | 180..1749 | 283..1852 | 7850 | 100 | Plus |
CG6398.b | 1752 | CG6398.b | 11..179 | 1..169 | 845 | 100 | Plus |
CG6398.a | 1749 | CG6398.a | 11..179 | 1..169 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17720158..17720764 | 1..607 | 3035 | 100 | Plus |
chrX | 22417052 | chrX | 17730333..17730940 | 1241..1848 | 3010 | 99.7 | Plus |
chrX | 22417052 | chrX | 17729701..17730044 | 737..1080 | 1720 | 100 | Plus |
chrX | 22417052 | chrX | 17730108..17730274 | 1078..1244 | 805 | 98.8 | Plus |
chrX | 22417052 | chrX | 17729504..17729636 | 605..737 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17840986..17841597 | 1241..1852 | 3060 | 100 | Plus |
X | 23542271 | X | 17830840..17831446 | 1..607 | 3035 | 100 | Plus |
X | 23542271 | X | 17840354..17840697 | 737..1080 | 1720 | 100 | Plus |
X | 23542271 | X | 17840761..17840927 | 1078..1244 | 835 | 100 | Plus |
X | 23542271 | X | 17840157..17840289 | 605..737 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17849084..17849695 | 1241..1852 | 3060 | 100 | Plus |
X | 23527363 | X | 17838938..17839544 | 1..607 | 3035 | 100 | Plus |
X | 23527363 | X | 17848452..17848795 | 737..1080 | 1720 | 100 | Plus |
X | 23527363 | X | 17848859..17849025 | 1078..1244 | 835 | 100 | Plus |
X | 23527363 | X | 17848255..17848387 | 605..737 | 665 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17729507..17729636 | 608..737 | 100 | -> | Plus |
chrX | 17729702..17730042 | 738..1078 | 100 | -> | Plus |
chrX | 17730109..17730274 | 1079..1244 | 98 | -> | Plus |
chrX | 17720158..17720764 | 1..607 | 96 | -> | Plus |
chrX | 17730337..17730940 | 1245..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..873 | 482..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..873 | 482..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..873 | 482..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..873 | 482..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..873 | 482..1354 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..1848 | 1..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..1848 | 1..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 13..1860 | 1..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 1..1848 | 1..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6398-RA | 13..1860 | 1..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17830840..17831446 | 1..607 | 100 | -> | Plus |
X | 17840160..17840289 | 608..737 | 100 | -> | Plus |
X | 17840355..17840695 | 738..1078 | 100 | -> | Plus |
X | 17840762..17840927 | 1079..1244 | 100 | -> | Plus |
X | 17840990..17841593 | 1245..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17830840..17831446 | 1..607 | 100 | -> | Plus |
X | 17840160..17840289 | 608..737 | 100 | -> | Plus |
X | 17840355..17840695 | 738..1078 | 100 | -> | Plus |
X | 17840762..17840927 | 1079..1244 | 100 | -> | Plus |
X | 17840990..17841593 | 1245..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17830840..17831446 | 1..607 | 100 | -> | Plus |
X | 17840160..17840289 | 608..737 | 100 | -> | Plus |
X | 17840355..17840695 | 738..1078 | 100 | -> | Plus |
X | 17840762..17840927 | 1079..1244 | 100 | -> | Plus |
X | 17840990..17841593 | 1245..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17724873..17725479 | 1..607 | 100 | -> | Plus |
arm_X | 17734193..17734322 | 608..737 | 100 | -> | Plus |
arm_X | 17734388..17734728 | 738..1078 | 100 | -> | Plus |
arm_X | 17734795..17734960 | 1079..1244 | 100 | -> | Plus |
arm_X | 17735023..17735626 | 1245..1848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17848258..17848387 | 608..737 | 100 | -> | Plus |
X | 17848453..17848793 | 738..1078 | 100 | -> | Plus |
X | 17848860..17849025 | 1079..1244 | 100 | -> | Plus |
X | 17838938..17839544 | 1..607 | 100 | -> | Plus |
X | 17849088..17849691 | 1245..1848 | 100 | Plus |
Translation from 481 to 1353
> LD36024.hyp MPCSAVTLSIATICAIIATALLAIAFSTDNWLHYDVWRNQIQSFAAKHSD AESLLHNMNVKYYYYTRTRGLFRICYPKERPPVSAVPTYLSPIETHCSNI DYFPQAEDEKIANEDATSRLHLARSCIALFIISFVTIFCAFWTGLSGCWK RSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGEDYFQQWNTV LRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAVCLRNEREKEEQLNLQ YLMPVYSQKQPPYPPYANYAQPQIYPGPYYHGSQYGPYNY*
Translation from 481 to 1353
> LD36024.pep MPCSAVTLSIATICAIIATALLAIAFSTDNWLHYDVWRNQIQSFAAKHSD AESLLHNMNVKYYYYTRTRGLFRICYPKERPPVSAVPTYLSPIETHCSNI DYFPQAEDEKIANEDATSRLHLARSCIALFIISFVTIFCAFWTGLSGCWK RSSGAITATSILLLVTCLLAAGAMGLWHTVEFFEKEKVVGEDYFQQWNTV LRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAVCLRNEREKEEQLNLQ YLMPVYSQKQPPYPPYANYAQPQIYPGPYYHGSQYGPYNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21105-PA | 290 | GF21105-PA | 1..290 | 1..290 | 1544 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19132-PA | 290 | GG19132-PA | 1..290 | 1..290 | 1553 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17940-PA | 290 | GH17940-PA | 1..290 | 1..290 | 1512 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6398-PB | 290 | CG6398-PB | 1..290 | 1..290 | 1567 | 100 | Plus |
CG6398-PA | 290 | CG6398-PA | 1..290 | 1..290 | 1567 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15410-PA | 290 | GI15410-PA | 1..290 | 1..290 | 1507 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14750-PA | 290 | GL14750-PA | 1..290 | 1..290 | 1535 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19563-PA | 290 | GA19563-PA | 1..290 | 1..290 | 1535 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22856-PA | 132 | GM22856-PA | 11..132 | 158..290 | 476 | 73.7 | Plus |
Dsec\GM22856-PA | 132 | GM22856-PA | 1..42 | 1..42 | 217 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17365-PA | 133 | GD17365-PA | 11..133 | 158..290 | 494 | 74.4 | Plus |
Dsim\GD17365-PA | 133 | GD17365-PA | 1..42 | 1..42 | 217 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16369-PA | 290 | GJ16369-PA | 1..290 | 1..290 | 1514 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25324-PA | 290 | GK25324-PA | 1..290 | 1..290 | 1521 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17688-PA | 290 | GE17688-PA | 1..290 | 1..290 | 1560 | 100 | Plus |