BDGP Sequence Production Resources |
Search the DGRC for LD36051
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | CG31510-RA |
Protein status: | LD36051.pep: gold |
Sequenced Size: | 4226 |
Gene | Date | Evidence |
---|---|---|
CG31510 | 2007-08-13 | Manual selection by Ken Wan |
CG31510 | 2008-04-29 | Picked prior to 5.5 |
CG31510 | 2008-12-18 | 5.12 accounting |
CG31108 | 2008-12-18 | 5.12 accounting |
4226 bp assembled on 2008-11-03
GenBank Submission: BT050544.1
> LD36051.complete CTCTGTCCTCTTCGGCCTGATGCAAGTAATAAATTTAAGTAAAGGCAAAT TATCCTTGTAATTGAAAGCGAGTCCATCGTGAATTGTGGCCATTGCGTAC CGAACCGCGAGAGAGCAGACGAGCGAAGCAGCGACTGTCATCGAATTGGA ATATTGGAAGCGACGAAGAGGAGAGGGATATCGAGCACCCAATAGCCCCC ATCCACATTTACGTCCAACGGGCCCCCAAGTATTTGCAAGTGGTTAGAGG GCCGCGTTTGCGTTTCGCCGCATCTCAATATCTGAAATCAAAAGAAAAAT CAAATTTGTATCAAAACCGAAAGAAAAATTAACTTTCTCCGAGCCACATG AAAACTGTTTAATGTTTAAAGGTATTACAACCACAAAATGAATACCAAAA ACATTGAAAACAAACCCATGGATGGGACCAAATTTCTTGATATGTTGTCA AAAATATCATTGGAGGAAATATTACAACTTGAATTCCGTAACAATCCAAC TAGCAAATGGGAAACATTGGTAACCCCCTCATACCCGCTTCGGAAATACA ATTGTAATATTTGCCGTGTTGTTCAGTTCGGCGACAAAAATTTGTTTAGC CACCTTAGTGGTAAAAAACATATTGCCGTAATGAAACTCAAAGAGCAATT GCAAATAAGAAACAAGCCCAGTGTAGCTCCACCCACAAAAAAGGGCCCTA ACACCAATGCGAATAATAACAAAAACAGTCAATCTCCTGCTGTTAAAAAT TTGCCAATTATAAACAAAAATGTACCAAATCAAAATAATAATGCAAACAC TAACGTTGTTAAGCAGGCAGCTGGAAATGAAGTTGCAAAAACACAGCCGA CGCAAAATAAAAAACCTGCAATGGGCGGTAAAACGAAAAGCACTGCTACC CCTAAGGTAGTAAATAATCCAAACACTCAAAAAAATATTCAGAATAGCAC AACAAACATTCAAAAGAATGTGCCAGAAAACAGTCCACCCAATCAAAAGA ATACATCAGTAAATAATACGCCTGTTAAGAAAAACACAGGGAATAATGCA CCCGTACAAACGAGTGTTCCTATTATTGGCGCAAACGCGAAGAAAAGACC TAACCCAAACCCGGGAAATATTCAAGCCAAGAAGGCAAATGTGAATGCGG CCAACGCAAATAACACTGCTAATAAAAAGGCTCCACAGTCTGCAATGAAT ACAGCGAAAACTTCACAGAATTCTGGAGGTCCTGCTCCAAAAACTACTGT GAGCAATACTACTTCTCAGCAAGCAGTAAATGTTCAGATTGAAAAGCAAC CATTAGAGCAAACAAAGCCAACTGTTCAAATTCCCTCACAGACTCCATCA AAGCCACAGTCGACGAAAGCTGTGCAGAATGCTAAATCGAATAACGCGGA CTTGGCTCGCAGCAAAACGACTGATCCAGATATAGTCAAAAATCCGCTTG CCACGAAAATATCTTGTGTTCCGCTAGCCAAGCTTATAAACTCTACACCA GAGCGCGAGAAAGATCTCGTAATCATTGACGATTTGCCAAAAGAGGCTAC AAAACCGCCAGAAACACCGAAAAAACCCATTCCAGTTCAAACGTCAAACC CGAAGCCTGTTATTGCGGCCAAGAAGCCAATCAATGTTGTTGCACAACCT GTGCGCCCTACTATCAATAAGGTAGTTAAGCCTTCATATGTTGCACCCAA GGATTACACAACAGCTAGACCTGGTGGCACATTTGAATCCAGGAAAGGTC ATGTCATGGGTCTCGTTGGGGTAGAGTACGTTTTGAAAATAGTTAAGACC TTGGCTGACAACAATGCCAGATATCAATGTTGCCTCTGCGAGATCACTGC TGATGAGCAATCCATGCACAACCATTTGCTTGGCTATAACCACCGTTTAA AGTATTTTGACAAGCATTTCCCCACTGCAATGCGTCTGTACCGTCAGTAT GTGTCCCATGTTCCGGAGAGCGAGGTGTGCAAAATAATGATGCCCATTTT TGATAAGCTTGCACATGCCATTGAAACGCACCATGGTCGAAAAAACGCCC ATCTGTGCTATGAACATGTCTATTCGAAAGATCGCCAGAGTTTGTTCACC CAGGTATACAATAGAAAGCACTCGTCTGAAAAGATTGGGCCTTTGTTCAC CCACGTCGTAGATGCTAAAGAGGTGGAGGAGTTGATCGACAAGATTAGAA CCAACGTTCAGCCCTTGATAAACGTTGAAAATTCGAATCCTTACTACGTC CCTCCATACGTACCACAGTATGCGGGCTATCAGAATGTGCCCCAAAATAA TACAGCACCCCCTATTGATGATGAAACTCACAAGCGAATGGTCGATAATT TTCTTAGGGACACCAGACATGGTTCGGGCGATGCACAGAAGTCCCGGAAC GCAAAGCGGAACCGCTCAAGATCCAAATCACCTGATCAAAGAAAGAGGGT CGCCCCCAAAAGGCACTGGAATGTGGAGCGTAGGTCAGTGTCGCCTTTGC GCGATGGCGACATTTGGCAGGCGTACCGTCACATGGTAGATCTCAAGGTG CGTGAGCTAAACGTGTCCTTCGACACATACAAATCTGATCCCGAACAGCA TCCGAGTTATCAAGCTGAGTGGCAAATGTTTTGGAAGCGCCGCAAGGATG AGCTTATACTGGCTGGCATTAATCATCGCACGTACAACTTCCAAAACGAA TGGATTAATTTCTTTAATGCTCGTATCGAAGAATTGTACAGTCAAGATAT TGAAAATATCAAAATAAAGTGTCGCGAACGGCTATGTCTGCCAATGACCA ATAACGAATTGGAGGACGAAAAGTATCACGTTCATTTGGACAAAACTGAT GAGCCCGATGATGAGCGCAGACCGGAATCTAGCATTGAACCGCAGAAAGT GTCTGTTGATGTAGAGACTCCGGTTGAGGAGCCGCCGAATGTGATTCATG TCCTTCGTCTTTTAACTGCTTTGGAGAATTATCTCGGAAGTCTGGGTCCT TTTGTTACCGAGATGCTAGTAAAAGCTCTGCAATCGCAGAAGATTTGTCC ACAAAAGTTGCATACTTCAATTTTAACAGCCGAAAACTGTGCTATTTTGG AGACCGTTAAAGAAAAATTTACTGGTCTCTTGATCTCCCATATTTATGAT CCCGCTAAAGAAAGGGCTTTGAAGAGAGCTATTAATGACACCGAACGGTT GCTTCAATGTGCCAGTAAACTTAACAAATCCAAAGATATAGAGCAGCTCG CTGAGAAACCAGAGTTGCAGATAGCCAAAAACTTACCGCATAACCTCGAT AAACCATTAGATAAAACTGAGCTTGCGGCAAAACTGGCTTCTTCATTGGT GTCCCAAGGCAAAACATCTATAAACCGAGAGGAACTTCAAAAGATACTTC AGGTATATACGATGATTGAGCAGAAGAAACGCCAGGACATCCCACTCTCA ACCAGTTCCGTGAATTCAGTGCCCAGCACTTCTACTAACTTGATTCCCAA TTCCAATAACAATGATAATTTGTTGACACAACATTCATCCAGAAATTTAA ACAACAATCCGACCAGTGAGTATACTGGTCAAAACTACTCCGGAAATGTG GCTCGATTTAACAACCAACAAAGCACTAACTTAGCTAACCCCTTCACTTC GAACGCGTATCCGACTGATCGTGGATTTGGCGGATCCGGCGGATATAATA GTCAATTCGGCTCTAAACTACCGGCAATCAACCCAAGCAGCGTTTTGCGA AACGATCTGACAACGTCGTCACTCTTCAACTTCAACACCAATTTGAACCC ATCTTATAACAACCTTAACCGGAGGAATAATAATTTTTAATAGATAGTTC GTAATGCGGTTAGATTGATAAAGAGAACATACATTAAACCCACAATAATG TATTACATTTTCGAATTAGCTACATTCTTCAAAAATTTGTACAACATTTG AGAAATGGAATGTAAATAAATCGATTTTATAACGGCAGCCAATTGTTGTT AATTAATTTAGAAAAGGAAGAAGTTAGTTTAAGTATATATTAATTAGTTA TCAATTAATTGTTTTTGAAATATAATATTGATAACTTTTTATATTTAGAT TTTAGTGCATAAATTTTTGATTGCGTGTAAATATATAAATTATTTTCATA AAATAAATTGTATATTCAGAAAATGTAAGAATAAAATAATATGGAACCTA AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1038..1190 | 4010..4163 | 189 | 63.9 | Plus |
jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 3232..3424 | 4190..3993 | 150 | 58.1 | Minus |
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1935..2042 | 4026..4136 | 132 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20940536..20944298 | 271..4033 | 99 | <- | Minus |
chr3R | 20945713..20945982 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 1..3453 | 388..3840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 1..3453 | 388..3840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 1..3453 | 388..3840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 1..3453 | 388..3840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 80..4071 | 1..3992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 80..4071 | 1..3992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 91..4082 | 1..3992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 80..4071 | 1..3992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31510-RA | 91..4289 | 1..4199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25117218..25121146 | 271..4199 | 100 | <- | Minus |
3R | 25122561..25122830 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25117218..25121146 | 271..4199 | 100 | <- | Minus |
3R | 25122561..25122830 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25117218..25121146 | 271..4199 | 100 | <- | Minus |
3R | 25122561..25122830 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20942940..20946868 | 271..4199 | 100 | <- | Minus |
arm_3R | 20948283..20948552 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24858049..24861977 | 271..4199 | 100 | <- | Minus |
3R | 24863392..24863661 | 1..270 | 100 | Minus |
Translation from 387 to 3839
> LD36051.pep MNTKNIENKPMDGTKFLDMLSKISLEEILQLEFRNNPTSKWETLVTPSYP LRKYNCNICRVVQFGDKNLFSHLSGKKHIAVMKLKEQLQIRNKPSVAPPT KKGPNTNANNNKNSQSPAVKNLPIINKNVPNQNNNANTNVVKQAAGNEVA KTQPTQNKKPAMGGKTKSTATPKVVNNPNTQKNIQNSTTNIQKNVPENSP PNQKNTSVNNTPVKKNTGNNAPVQTSVPIIGANAKKRPNPNPGNIQAKKA NVNAANANNTANKKAPQSAMNTAKTSQNSGGPAPKTTVSNTTSQQAVNVQ IEKQPLEQTKPTVQIPSQTPSKPQSTKAVQNAKSNNADLARSKTTDPDIV KNPLATKISCVPLAKLINSTPEREKDLVIIDDLPKEATKPPETPKKPIPV QTSNPKPVIAAKKPINVVAQPVRPTINKVVKPSYVAPKDYTTARPGGTFE SRKGHVMGLVGVEYVLKIVKTLADNNARYQCCLCEITADEQSMHNHLLGY NHRLKYFDKHFPTAMRLYRQYVSHVPESEVCKIMMPIFDKLAHAIETHHG RKNAHLCYEHVYSKDRQSLFTQVYNRKHSSEKIGPLFTHVVDAKEVEELI DKIRTNVQPLINVENSNPYYVPPYVPQYAGYQNVPQNNTAPPIDDETHKR MVDNFLRDTRHGSGDAQKSRNAKRNRSRSKSPDQRKRVAPKRHWNVERRS VSPLRDGDIWQAYRHMVDLKVRELNVSFDTYKSDPEQHPSYQAEWQMFWK RRKDELILAGINHRTYNFQNEWINFFNARIEELYSQDIENIKIKCRERLC LPMTNNELEDEKYHVHLDKTDEPDDERRPESSIEPQKVSVDVETPVEEPP NVIHVLRLLTALENYLGSLGPFVTEMLVKALQSQKICPQKLHTSILTAEN CAILETVKEKFTGLLISHIYDPAKERALKRAINDTERLLQCASKLNKSKD IEQLAEKPELQIAKNLPHNLDKPLDKTELAAKLASSLVSQGKTSINREEL QKILQVYTMIEQKKRQDIPLSTSSVNSVPSTSTNLIPNSNNNDNLLTQHS SRNLNNNPTSEYTGQNYSGNVARFNNQQSTNLANPFTSNAYPTDRGFGGS GGYNSQFGSKLPAINPSSVLRNDLTTSSLFNFNTNLNPSYNNLNRRNNNF *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17099-PA | 1177 | GF17099-PA | 245..1063 | 340..1111 | 2269 | 58.1 | Plus |
Dana\GF17099-PA | 1177 | GF17099-PA | 1..100 | 19..111 | 249 | 53.5 | Plus |
Dana\GF19172-PA | 1215 | GF19172-PA | 582..752 | 846..1016 | 243 | 34.1 | Plus |
Dana\GF19172-PA | 1215 | GF19172-PA | 36..344 | 459..784 | 229 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12285-PA | 914 | GG12285-PA | 22..904 | 266..1140 | 3782 | 82.3 | Plus |
Dere\GG18290-PA | 1232 | GG18290-PA | 597..747 | 846..1000 | 211 | 35.4 | Plus |
Dere\GG18290-PA | 1232 | GG18290-PA | 281..379 | 710..807 | 176 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12290-PA | 1257 | GH12290-PA | 638..802 | 842..1010 | 270 | 34.9 | Plus |
Dgri\GH12290-PA | 1257 | GH12290-PA | 288..363 | 710..784 | 168 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31510-PA | 1150 | CG31510-PA | 1..1150 | 1..1150 | 6031 | 100 | Plus |
CG7065-PA | 1231 | CG7065-PA | 558..758 | 817..1016 | 235 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15535-PA | 1247 | GI15535-PA | 572..793 | 812..1029 | 244 | 31.2 | Plus |
Dmoj\GI15535-PA | 1247 | GI15535-PA | 281..356 | 710..784 | 164 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20508-PA | 636 | GL20508-PA | 1..636 | 1..655 | 984 | 37.6 | Plus |
Dper\GL26800-PA | 1203 | GL26800-PA | 575..748 | 841..1015 | 241 | 34.4 | Plus |
Dper\GL26800-PA | 1203 | GL26800-PA | 15..335 | 438..784 | 222 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20072-PA | 1197 | GA20072-PA | 574..747 | 841..1015 | 239 | 34.4 | Plus |
Dpse\GA20072-PA | 1197 | GA20072-PA | 15..335 | 438..784 | 217 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17749-PA | 1159 | GM17749-PA | 1..1159 | 1..1150 | 5303 | 89.6 | Plus |
Dsec\GM13721-PA | 1117 | GM13721-PA | 589..759 | 841..1010 | 225 | 33.3 | Plus |
Dsec\GM13721-PA | 1117 | GM13721-PA | 37..349 | 459..779 | 211 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18233-PA | 1159 | GD18233-PA | 1..1159 | 1..1150 | 5324 | 89.8 | Plus |
Dsim\GD16930-PA | 1211 | GD16930-PA | 589..744 | 841..1000 | 213 | 32.7 | Plus |
Dsim\GD16930-PA | 1211 | GD16930-PA | 37..349 | 459..779 | 209 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14879-PA | 1186 | GJ14879-PA | 35..360 | 459..801 | 264 | 24.4 | Plus |
Dvir\GJ14879-PA | 1186 | GJ14879-PA | 585..786 | 842..1044 | 253 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13884-PA | 1241 | GK13884-PA | 18..1058 | 11..1015 | 1959 | 43.5 | Plus |
Dwil\GK25038-PA | 1262 | GK25038-PA | 599..775 | 846..1018 | 251 | 35.4 | Plus |
Dwil\GK25038-PA | 1262 | GK25038-PA | 264..356 | 710..801 | 167 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10738-PA | 911 | GE10738-PA | 15..911 | 266..1150 | 3759 | 81.6 | Plus |
Dyak\GE15823-PA | 1222 | GE15823-PA | 37..373 | 459..801 | 234 | 24.7 | Plus |
Dyak\GE15823-PA | 1222 | GE15823-PA | 596..747 | 845..1000 | 215 | 34.2 | Plus |
Translation from 387 to 3839
> LD36051.hyp MNTKNIENKPMDGTKFLDMLSKISLEEILQLEFRNNPTSKWETLVTPSYP LRKYNCNICRVVQFGDKNLFSHLSGKKHIAVMKLKEQLQIRNKPSVAPPT KKGPNTNANNNKNSQSPAVKNLPIINKNVPNQNNNANTNVVKQAAGNEVA KTQPTQNKKPAMGGKTKSTATPKVVNNPNTQKNIQNSTTNIQKNVPENSP PNQKNTSVNNTPVKKNTGNNAPVQTSVPIIGANAKKRPNPNPGNIQAKKA NVNAANANNTANKKAPQSAMNTAKTSQNSGGPAPKTTVSNTTSQQAVNVQ IEKQPLEQTKPTVQIPSQTPSKPQSTKAVQNAKSNNADLARSKTTDPDIV KNPLATKISCVPLAKLINSTPEREKDLVIIDDLPKEATKPPETPKKPIPV QTSNPKPVIAAKKPINVVAQPVRPTINKVVKPSYVAPKDYTTARPGGTFE SRKGHVMGLVGVEYVLKIVKTLADNNARYQCCLCEITADEQSMHNHLLGY NHRLKYFDKHFPTAMRLYRQYVSHVPESEVCKIMMPIFDKLAHAIETHHG RKNAHLCYEHVYSKDRQSLFTQVYNRKHSSEKIGPLFTHVVDAKEVEELI DKIRTNVQPLINVENSNPYYVPPYVPQYAGYQNVPQNNTAPPIDDETHKR MVDNFLRDTRHGSGDAQKSRNAKRNRSRSKSPDQRKRVAPKRHWNVERRS VSPLRDGDIWQAYRHMVDLKVRELNVSFDTYKSDPEQHPSYQAEWQMFWK RRKDELILAGINHRTYNFQNEWINFFNARIEELYSQDIENIKIKCRERLC LPMTNNELEDEKYHVHLDKTDEPDDERRPESSIEPQKVSVDVETPVEEPP NVIHVLRLLTALENYLGSLGPFVTEMLVKALQSQKICPQKLHTSILTAEN CAILETVKEKFTGLLISHIYDPAKERALKRAINDTERLLQCASKLNKSKD IEQLAEKPELQIAKNLPHNLDKPLDKTELAAKLASSLVSQGKTSINREEL QKILQVYTMIEQKKRQDIPLSTSSVNSVPSTSTNLIPNSNNNDNLLTQHS SRNLNNNPTSEYTGQNYSGNVARFNNQQSTNLANPFTSNAYPTDRGFGGS GGYNSQFGSKLPAINPSSVLRNDLTTSSLFNFNTNLNPSYNNLNRRNNNF *