BDGP Sequence Production Resources |
Search the DGRC for LD36057
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | cas-RA |
Protein status: | LD36057.pep: gold |
Preliminary Size: | 3275 |
Sequenced Size: | 3151 |
Gene | Date | Evidence |
---|---|---|
CG2102 | 2001-07-04 | Blastp of sequenced clone |
CG2102 | 2003-01-01 | Sim4 clustering to Release 3 |
cas | 2008-04-29 | Release 5.5 accounting |
cas | 2008-08-15 | Release 5.9 accounting |
cas | 2008-12-18 | 5.12 accounting |
3151 bp (3151 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051865
> LD36057.complete CGAACTTTGAGGATCGCTGAGACGAGACGCCGTGCAAGAAAGTCGATCCA AAATCCGAAATTCGAAATCCGTGCTGTGATCTGTGCTGAATATAGTGAAG AAATCTTAAAGAATTTTCAAAAAGAAATCCCAGTGCTGTGCTGAATATAT CCGCGAAAGTGTGCCACAAAAATGTCCAACCAAATGGAGTTTATTATGCA ACTCTACATGATGAACTTGATGAAGCAGCAGCAGCAAATGCAGCTCCAGC TTCCGCAGCAGCAACAGCAGCAGCAGCTGGCTGGATACACTTACACACAG AACGAGGATATCTCTAGCAGCACATCCGTGCAGCAGCAACAGCAGCAGCA GCAGGAGCAACTGCAGCAGCCACAGCCAGATCTCCGCAAGACAAGAACGC ACAAGCGCATTAGCTCGCAAAACACCAACTGTAGTAGTAGCCGTAGTTGT AGTCCCAATAGTAATTTGATTGCTTTTCAACCACAACAATACCCAGGCGC TACAGCGGCAACTCCTTCCACTCCCAACAGCCACCCCAGCAACCTGGTCA ACCAGATGCTGCTCCAAAGCCTGCCGCCGCTGACGCAGCTCATGTTGCAG CAGCAGCAGCAGCAACATTTGCTGACCACCTCCAACCTTCTACTAACACC CACCCACACCCCCAGTTCGCTGGGCAAGCAGGATCCACTGCAGCATCCGT TGTTGCTGGGCCAGTTTGCCGGCTCCGAACAGATGGCCACAAATAACTTC CTTCAATCATCCACAGTGACCTCCACGCCCATCGAGAGAGAGAAGGCAGC CACACCAGCACCCTCCGCCGGAGCAACTGCCGGCAACCTTTCGGCGGCCC AGGTCAAGTTTGAGCAGGAGTCCGCCGACGACGATGAGGACGATGATAAG CCGCTGTCCAGCCTCACCAGCTGCAGCTCCTCGGGCCACACCAACGCCAG CTCCGAGAAGCTGCTGTTGTCGGGCGTCCATCCGCTGGAGTCAACCACCG ACAGCCTAGACTCACCCAGCATGTATACGCCCGTCAAGCAGCCGGCGGAC TCATCGTACGGACTCATCACACCCGTCGACAGTGATCTGACCCCCAACAC ACCCCTCCAACCGACCCAAACAATATCCCTGCTGACGCCGCCGTCGAGTG AGCAGAGCAAGAGCCTGGTGAGCCTCTCGGCGGCCAGCGGCCTGGATGCT CTGCTCCAGAACGAGGAGGTACTGAAGAACCTGCGGAAAGTGTCCTCCTA CCTGGAGTGCGAGAACAGCCTGTGCAGGCAGGAGAACCTGCGGGAGCACT TCCATTGCCACGAGGAGCCCTGCCAGGGCAAGATCCTGAGCAAGAAGGAC GACATCATCCGGCACCTGAAGTGGCACAAGAAGCGCAAGGAAAGCCTCAA GCTGGGCTTTGCCCGCTTCTCCTCCTCGGACGACTGTGCACCAGCCTACG GAGAGGGTTGCGCCTACAACTGGAAACAGACCCACTACCACTGCGTCTAC GAGCACTGTCCCAAGGTGTATGTGAGCACCAGTGACGTCCAGATGCATGC CAATTTCCACCGCAAGGACTCCGAGATCGTGAACGAGGGCTTCCGGCGCT TCCGGGCGCACGAGACCTGCCGCATCGAGGATTGCCCCTTTTTCGGCAAG AAGATCTCCCACTACCACTGCTGTCGCGAGGGATGCACCCACACCTTCAA GAACAAGGCCGATATGGACAAGCACAAAACTTACCATCTGAAGGACCACC AGCTGAAGATGGACGGCTTCAAGAAGATCCTGAAGACCGAGGTATGTCCC TTCGACGCCTGCAAGTTCTCCACCGTCTGCAACCACATCCACTGCGTCCG CGAGGGCTGCGACTACATCCTGCACTCCAGCAGCCAGATGATCAGCCACA AGAGAAAGCACGATCGTCAGGACGGAGAGCAGGCGTACCAGCAGTTTAAG ATCAAGCAGGACGTGGAGGAGTCCTCCCTGGATGCCATGCCCCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCCCACCAGCCTTAGTCAATCCCAGAGCA GCAGCTCTGTATGCGGCGGCAGCAACACCTCCACTCCACTCTCCTCTTTG TCCGCCGAGCACTTCCTGGCTCGGAAACGCGGCAGGCCACCCAAGAAAAT CCAACTGCCAGCCGACGCTCAGCAGTCGGAAGCCAAGCGCCTGAAAGTCG AAGACGAGTCCTCTAATCCCGCCATGCTCCTGCCCCAGTCCCAGCCAGCA GCCGCTGTGCATCCGCTGACAAGTGGACTCTTTCCCGGTCTCCTGCCCGC TGCCGCCGCTCCTGGAGTGGATCCCACAGCCCCTAACTTCCAGCTCACCC ACCTGATGGCCCTCTTCCAGTTGCAGAATCCCCTCTTCTACCAGAACCTC TATCCGGGAATGACCCAGAATTCCTCCATGCTCGGCAACCTGGCAGCACT TAGCGCCGCATCGGCAGCAGCGGCGGCGGCAGCGGCGGCAAATGGAGCCG GAGTCCAGCAGCCGAAGGCAGAGTTTAGCTTTAAGCCAGAGTTTAAGGAG TAGGAAGGATGCGTGTCCTTAGGGTATTTTGCCAGCTACTTAGTTTGACC GACGGACGTTGGACATTGTACATACGCGCTTTAAGCAGGTTTAGGTGGGT TTTTTTGTGGGTTCAGGCAGATCCAGGACAAGGCATCCTTCCCTCCACAA AAACCAACTCAGCCACACTTTGAGAACCTAGAAGTCCCCTATACAAAGTG TAGCTGAATTGGCTTTTGCCAAACATTTTCCCCTTTAGCTTAGATTCTCT CAGTGCCACATTAATTTTTAAAATTTTCAGCCATTTTAAATAAAAAGGAA GAACTTTCTGAATTTAAGTTTGACTAAACTGTGATGTTTTCATTAGAGTA GCCTCTTTTAATTGATAGAGCGAGTGCAGGCTATGCAGGATATGCAGGAC TTAGGAGACTTGGATTGTCAATAACATAGCGTCTAAGCATTACATTGTAT GTGATATACTAATAAATAATGGCTAATTGTTTTTGCTTTATAATTTAAGG GAATAATATTATAATTCTAATTATAAACTTTAGTAAAATCAGCATTCTTC TATAATAAATAAGTCAACATTACCTGAATAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1541409..1542431 | 1023..1 | 5115 | 100 | Minus |
chr3R | 27901430 | chr3R | 1538623..1539600 | 3129..2152 | 4890 | 100 | Minus |
chr3R | 27901430 | chr3R | 1540176..1540870 | 1717..1023 | 3475 | 100 | Minus |
chr3R | 27901430 | chr3R | 1539672..1540106 | 2151..1717 | 2175 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5715761..5716783 | 1023..1 | 5115 | 100 | Minus |
3R | 32079331 | 3R | 5712972..5713952 | 3132..2152 | 4905 | 100 | Minus |
3R | 32079331 | 3R | 5714528..5715222 | 1717..1023 | 3475 | 100 | Minus |
3R | 32079331 | 3R | 5714024..5714458 | 2151..1717 | 2175 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5456592..5457614 | 1023..1 | 5115 | 100 | Minus |
3R | 31820162 | 3R | 5453803..5454783 | 3132..2152 | 4905 | 100 | Minus |
3R | 31820162 | 3R | 5455359..5456053 | 1717..1023 | 3475 | 100 | Minus |
3R | 31820162 | 3R | 5454855..5455289 | 2151..1717 | 2175 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6863 | 1993..2079 | 195 | 73.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1538623..1539600 | 2152..3129 | 97 | <- | Minus |
chr3R | 1539672..1540105 | 1718..2151 | 92 | <- | Minus |
chr3R | 1540176..1540869 | 1024..1717 | 100 | <- | Minus |
chr3R | 1541409..1542154 | 278..1023 | 94 | == | Minus |
chr3R | 1542209..1542431 | 1..223 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 1..2382 | 172..2553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 1..2382 | 172..2553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 1..2382 | 172..2553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 1..2382 | 172..2553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 1..2382 | 172..2553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 518..3646 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 518..3646 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 23..3151 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 518..3646 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cas-RA | 23..3151 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5712975..5713952 | 2152..3129 | 100 | <- | Minus |
3R | 5714024..5714457 | 1718..2151 | 100 | <- | Minus |
3R | 5714528..5715221 | 1024..1717 | 100 | <- | Minus |
3R | 5715761..5716783 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5712975..5713952 | 2152..3129 | 100 | <- | Minus |
3R | 5714024..5714457 | 1718..2151 | 100 | <- | Minus |
3R | 5714528..5715221 | 1024..1717 | 100 | <- | Minus |
3R | 5715761..5716783 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5712975..5713952 | 2152..3129 | 100 | <- | Minus |
3R | 5714024..5714457 | 1718..2151 | 100 | <- | Minus |
3R | 5714528..5715221 | 1024..1717 | 100 | <- | Minus |
3R | 5715761..5716783 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1538697..1539674 | 2152..3129 | 100 | <- | Minus |
arm_3R | 1539746..1540179 | 1718..2151 | 100 | <- | Minus |
arm_3R | 1540250..1540943 | 1024..1717 | 100 | <- | Minus |
arm_3R | 1541483..1542505 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5453806..5454783 | 2152..3129 | 100 | <- | Minus |
3R | 5454855..5455288 | 1718..2151 | 100 | <- | Minus |
3R | 5455359..5456052 | 1024..1717 | 100 | <- | Minus |
3R | 5456592..5457614 | 1..1023 | 100 | Minus |
Translation from 171 to 2552
> LD36057.pep MSNQMEFIMQLYMMNLMKQQQQMQLQLPQQQQQQQLAGYTYTQNEDISSS TSVQQQQQQQQEQLQQPQPDLRKTRTHKRISSQNTNCSSSRSCSPNSNLI AFQPQQYPGATAATPSTPNSHPSNLVNQMLLQSLPPLTQLMLQQQQQQHL LTTSNLLLTPTHTPSSLGKQDPLQHPLLLGQFAGSEQMATNNFLQSSTVT STPIEREKAATPAPSAGATAGNLSAAQVKFEQESADDDEDDDKPLSSLTS CSSSGHTNASSEKLLLSGVHPLESTTDSLDSPSMYTPVKQPADSSYGLIT PVDSDLTPNTPLQPTQTISLLTPPSSEQSKSLVSLSAASGLDALLQNEEV LKNLRKVSSYLECENSLCRQENLREHFHCHEEPCQGKILSKKDDIIRHLK WHKKRKESLKLGFARFSSSDDCAPAYGEGCAYNWKQTHYHCVYEHCPKVY VSTSDVQMHANFHRKDSEIVNEGFRRFRAHETCRIEDCPFFGKKISHYHC CREGCTHTFKNKADMDKHKTYHLKDHQLKMDGFKKILKTEVCPFDACKFS TVCNHIHCVREGCDYILHSSSQMISHKRKHDRQDGEQAYQQFKIKQDVEE SSLDAMPQQQQQQQQQQPTSLSQSQSSSSVCGGSNTSTPLSSLSAEHFLA RKRGRPPKKIQLPADAQQSEAKRLKVEDESSNPAMLLPQSQPAAAVHPLT SGLFPGLLPAAAAPGVDPTAPNFQLTHLMALFQLQNPLFYQNLYPGMTQN SSMLGNLAALSAASAAAAAAAAANGAGVQQPKAEFSFKPEFKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18652-PA | 803 | GF18652-PA | 1..803 | 1..793 | 2597 | 74.9 | Plus |
Dana\GF25271-PA | 523 | GF25271-PA | 324..511 | 403..579 | 206 | 26.4 | Plus |
Dana\GF25271-PA | 523 | GF25271-PA | 333..460 | 473..584 | 156 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10881-PA | 841 | GG10881-PA | 1..841 | 1..793 | 3115 | 83.9 | Plus |
Dere\GG15511-PA | 549 | GG15511-PA | 344..537 | 403..579 | 203 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18116-PA | 772 | GH18116-PA | 1..772 | 1..793 | 2090 | 64.6 | Plus |
Dgri\GH18114-PA | 797 | GH18114-PA | 1..797 | 1..793 | 2004 | 60.3 | Plus |
Dgri\GH16656-PA | 571 | GH16656-PA | 356..534 | 403..579 | 231 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cas-PA | 793 | CG2102-PA | 1..793 | 1..793 | 4153 | 100 | Plus |
cas-PC | 691 | CG2102-PC | 1..691 | 1..793 | 3182 | 81.1 | Plus |
CG7512-PB | 540 | CG7512-PB | 335..528 | 403..579 | 203 | 25.1 | Plus |
Spps-PA | 968 | CG5669-PA | 375..824 | 13..465 | 177 | 22.6 | Plus |
Spps-PB | 985 | CG5669-PB | 375..824 | 13..465 | 177 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23829-PA | 789 | GI23829-PA | 1..789 | 1..793 | 2152 | 63.9 | Plus |
Dmoj\GI11615-PA | 595 | GI11615-PA | 383..569 | 403..579 | 212 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23017-PA | 831 | GL23017-PA | 1..831 | 1..793 | 2680 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15242-PA | 823 | GA15242-PA | 1..823 | 1..793 | 2684 | 75.1 | Plus |
Dpse\GA23877-PA | 581 | GA23877-PA | 364..556 | 403..579 | 198 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10598-PA | 788 | GM10598-PA | 1..788 | 1..793 | 4080 | 97.1 | Plus |
Dsec\GM25280-PA | 542 | GM25280-PA | 337..530 | 403..579 | 208 | 25.6 | Plus |
Dsec\GM25280-PA | 542 | GM25280-PA | 343..479 | 470..584 | 160 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19588-PA | 783 | GD19588-PA | 1..783 | 1..793 | 3991 | 96.1 | Plus |
Dsim\GD17635-PA | 477 | GD17635-PA | 272..465 | 403..579 | 203 | 25.1 | Plus |
Dsim\GD17635-PA | 477 | GD17635-PA | 274..414 | 465..584 | 164 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23287-PA | 832 | GJ23287-PA | 1..832 | 1..793 | 2202 | 64.6 | Plus |
Translation from 171 to 2552
> LD36057.hyp MSNQMEFIMQLYMMNLMKQQQQMQLQLPQQQQQQQLAGYTYTQNEDISSS TSVQQQQQQQQEQLQQPQPDLRKTRTHKRISSQNTNCSSSRSCSPNSNLI AFQPQQYPGATAATPSTPNSHPSNLVNQMLLQSLPPLTQLMLQQQQQQHL LTTSNLLLTPTHTPSSLGKQDPLQHPLLLGQFAGSEQMATNNFLQSSTVT STPIEREKAATPAPSAGATAGNLSAAQVKFEQESADDDEDDDKPLSSLTS CSSSGHTNASSEKLLLSGVHPLESTTDSLDSPSMYTPVKQPADSSYGLIT PVDSDLTPNTPLQPTQTISLLTPPSSEQSKSLVSLSAASGLDALLQNEEV LKNLRKVSSYLECENSLCRQENLREHFHCHEEPCQGKILSKKDDIIRHLK WHKKRKESLKLGFARFSSSDDCAPAYGEGCAYNWKQTHYHCVYEHCPKVY VSTSDVQMHANFHRKDSEIVNEGFRRFRAHETCRIEDCPFFGKKISHYHC CREGCTHTFKNKADMDKHKTYHLKDHQLKMDGFKKILKTEVCPFDACKFS TVCNHIHCVREGCDYILHSSSQMISHKRKHDRQDGEQAYQQFKIKQDVEE SSLDAMPQQQQQQQQQQPTSLSQSQSSSSVCGGSNTSTPLSSLSAEHFLA RKRGRPPKKIQLPADAQQSEAKRLKVEDESSNPAMLLPQSQPAAAVHPLT SGLFPGLLPAAAAPGVDPTAPNFQLTHLMALFQLQNPLFYQNLYPGMTQN SSMLGNLAALSAASAAAAAAAAANGAGVQQPKAEFSFKPEFKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cas-PA | 793 | CG2102-PA | 1..793 | 1..793 | 4153 | 100 | Plus |
cas-PC | 691 | CG2102-PC | 1..691 | 1..793 | 3182 | 81.1 | Plus |
CG7512-PB | 540 | CG7512-PB | 335..528 | 403..579 | 203 | 25.1 | Plus |
Spps-PA | 968 | CG5669-PA | 375..824 | 13..465 | 177 | 22.6 | Plus |
Spps-PB | 985 | CG5669-PB | 375..824 | 13..465 | 177 | 22.6 | Plus |