BDGP Sequence Production Resources |
Search the DGRC for LD36080
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | ras-RB |
Protein status: | LD36080.pep: wuzgold |
Preliminary Size: | 2504 |
Sequenced Size: | 2520 |
Gene | Date | Evidence |
---|---|---|
CG1799 | 2001-10-10 | Blastp of sequenced clone |
CG1799 | 2003-01-01 | Sim4 clustering to Release 3 |
ras | 2008-04-29 | Release 5.5 accounting |
ras | 2008-08-15 | Release 5.9 accounting |
ras | 2008-12-18 | 5.12 accounting |
2520 bp (2520 high quality bases) assembled on 2001-10-10
GenBank Submission: AY089553
> LD36080.complete CCGGTTGGCCGACGGGCGAGGTGGTGCGGGGGCGGATTACGTGAGAGCGA AGGCGGAACGACAGCAACAACAACAGCACTGGTGATGTCGATGATGAAGT AGTGGGTGGAGGAGGCGATAAATCTAAATCTCTGCCCAGCTCGAGAGGAA TCTGTATCCATAAAAAGAAATCTGCAACAGGAGAAGATCCCAAAACAGGC GGTTTTTATCTCTATACGGCTTGTTATTGTCAGCTCCCCGTTGTTTGTTG ACTGTTTGTTTGGGTTGAACGCACGCGGAAAATGGAGAGCACGACAAAGG TGAAGGTGAACGGCTTTGTGGAATCGACGTCGTCTTCAGCGGCGCCGGCA ATCCAGACAAAGAGTACCACCGGATTCGATGCCGAGCTGCAGGATGGGCT GAGTTGTAAGGAACTGTTCCAGAACGCGACTTTCTCATACTGCCCGGCTA CATAGACTTCACCGCCGAGGAGGTCGATCTCAGTTCGCCACTGACCAAGT CGCTGACATTGCGAGCACCGCTGGTTAGTTCGCCCATGGACACGGTAACC GAATCGGAGATGGCCATCGCCATGGCGCTGTGTGGTGGCATTGGCATCAT CCATCACAACTGCACGCCGGAATACCAGGCGTTGGAGGTGCACAAGGTTA AGAAGTACAAGCACGGCTTCATGCGCGACCCCTCGGTGATGTCGCCCACG AATACGGTGGGGGATGTGTTGGAGGCGCGGCGGAAGAACGGATTCACCGG CTATCCGGTCACCGAGAACGGCAAACTTGGCGGCAAGCTGCTGGGCATGG TCACGTCGCGAGACATTGACTTCCGCGAGAACCAGCCGGAGGTCCTGCTG GCCGACATCATGACCACCGAACTGGTCACCGCTCCCAATGGCATCAATCT GCCCACGGCAAACGCTATTCTCGAGAAGAGCAAGAAGGGCAAACTGCCGA TTGTGAATCAGGCCGGCGAACTGGTGGCCATGATTGCCCGCACGGATTTG AAGAAGGCCCGCTCCTACCCGAATGCCTCCAAGGACTCCAATAAGCAGCT CCTCGTCGGCGCTGCCATCGGAACGCGATCGGAGGACAAGGCGCGCCTGG CTCTGCTGGTGGCCAACGGCGTGGACGTTATCATCCTTGATTCATCGCAG GGCAACTCCGTCTACCAGGTGGAGATGATCAAGTACATTAAGGAGACCTA TCCCGAACTACAGGTCATTGGTGGCAATGTGGTAACACGTGCCCAGGCCA AAAATCTCATTGATGCCGGCGTCGATGGACTGCGTGTGGGCATGGGTTCC GGTTCCATCTGCATCACCCAGGAGGTGATGGCCTGCGGATGTCCTCAGGC CACTGCTGTCTACCAGGTGTCCACGTACGCTCGCCAATTCGGAGTGCCAG TGATCGCGGACGGAGGCATCCAGTCCATTGGACACATTGTGAAGGCTATT GCATTGGGAGCCAGCGCTGTAATGATGGGCTCCCTGCTGGCGGGCACATC GGAGGCACCGGGCGAGTACTTCTTCTCCGACGGAGTGCGCCTTAAGAAGT ACCGCGGCATGGGCTCCCTGGAGGCCATGGAGCGCGGCGATGCCAAGGGC GCTGCCATGTCGCGCTACTACCACAACGAGATGGATAAAATGAAGGTGGC ACAGGGCGTCAGTGGCAGCATCGTGGACAAGGGCAGTGTGCTGCGCTATC TACCCTATTTGGAGTGCGGACTGCAGCACAGTTGTCAGGACATCGGTGCT AACTCCATTAATAAATTGAGGGATATGATCTATAATGGCCAACTGCGCTT CATGAAGCGCACCCATTCCGCTCAACTGGAAGGCAATGTCCATGGCCTCT TCAGCTACGAGAAGCGTCTCTTCTAACATACGACGATGGCTGCGACGGAA ACGGGCAGTGGAGGAGTGCCTGCCCCTGTCCAGCAGCAGCAGCAGCAGCA GCAACACCATCAGCAGCAACAGCATCGCCACCGATCTGCAGCAGGCCCAC TGCTCGACTACACCCGCCTATTCGATCGCAAGTGAGAGAAGAAAAGAGAA TCGAGCGCTCGAATAGCGCATCCTTTTCCCCTGGATTTTTTCCAATGTTA GGTTAAGTTTAATCGGAATCGCTGACGTTAAAGATTACGATTCCAATGTA GATTCCCCTTTTTGATGGCGGTGGAGGTTACCTCGAATCGCCCGAATACA TGTGTATACTTAATCCATCTGTCTGGTAGACAGAATCCTAATTATAAGTG TTTGCAGGTTACTTGATCTGTATAGAAAGTATATAATCTTCAACTATTCG CTATATATATCTAAAGCGCAACGCGTTGGTTGGCCGCTTACTTATTTTGC ACGCTATATGTATATAGATGTTAATCTCTATTTGTATAGTGTTGGATGTT TACTATTATACCGAAGCTAGCTTCAAGTTTTAAAACTCTGCCAAACTTAT TAAATGTGAACTGAAACTAACTGAAAAGTAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ras-RB | 2496 | ras-RB | 18..2496 | 1..2479 | 12395 | 100 | Plus |
ras-RA | 3381 | ras-RA | 1174..3227 | 427..2480 | 10270 | 100 | Plus |
ras-RC | 3141 | ras-RC | 1080..3133 | 427..2480 | 10270 | 100 | Plus |
ras-RA | 3381 | ras-RA | 867..1154 | 139..426 | 1440 | 100 | Plus |
ras-RC | 3141 | ras-RC | 867..1060 | 233..426 | 970 | 100 | Plus |
ras-RA | 3381 | ras-RA | 18..156 | 1..139 | 695 | 100 | Plus |
ras-RC | 3141 | ras-RC | 18..156 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10639463..10640179 | 1769..2479 | 3430 | 98.9 | Plus |
chrX | 22417052 | chrX | 10637787..10638439 | 577..1229 | 3265 | 100 | Plus |
chrX | 22417052 | chrX | 10638852..10639394 | 1229..1771 | 2715 | 100 | Plus |
chrX | 22417052 | chrX | 10637043..10637331 | 138..426 | 1430 | 99.7 | Plus |
chrX | 22417052 | chrX | 10637442..10637593 | 426..577 | 760 | 100 | Plus |
chrX | 22417052 | chrX | 10635890..10636028 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10748096..10748807 | 1769..2480 | 3560 | 100 | Plus |
X | 23542271 | X | 10746420..10747072 | 577..1229 | 3265 | 100 | Plus |
X | 23542271 | X | 10747485..10748027 | 1229..1771 | 2715 | 100 | Plus |
X | 23542271 | X | 10745676..10745964 | 138..426 | 1445 | 100 | Plus |
X | 23542271 | X | 10746075..10746226 | 426..577 | 760 | 100 | Plus |
X | 23542271 | X | 10744523..10744661 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10756194..10756905 | 1769..2480 | 3560 | 100 | Plus |
X | 23527363 | X | 10754518..10755170 | 577..1229 | 3265 | 100 | Plus |
X | 23527363 | X | 10755583..10756125 | 1229..1771 | 2715 | 100 | Plus |
X | 23527363 | X | 10753774..10754062 | 138..426 | 1445 | 100 | Plus |
X | 23527363 | X | 10754173..10754324 | 426..577 | 760 | 100 | Plus |
X | 23527363 | X | 10752621..10752759 | 1..139 | 695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10635890..10636028 | 1..139 | 100 | -> | Plus |
chrX | 10637045..10637331 | 140..426 | 99 | -> | Plus |
chrX | 10637443..10637593 | 427..577 | 100 | -> | Plus |
chrX | 10637788..10638439 | 578..1229 | 100 | -> | Plus |
chrX | 10638853..10639393 | 1230..1770 | 100 | -> | Plus |
chrX | 10639465..10640179 | 1771..2479 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 1..145 | 282..426 | 100 | -> | Plus |
ras-RA | 165..1614 | 427..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 165..1614 | 427..1876 | 100 | Plus | |
ras-RA | 1..145 | 282..426 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RC | 1..145 | 282..426 | 100 | -> | Plus |
ras-RC | 165..1614 | 427..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 1..145 | 282..426 | 100 | -> | Plus |
ras-RA | 165..1614 | 427..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 1..145 | 282..426 | 100 | -> | Plus |
ras-RA | 165..1614 | 427..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RB | 18..2496 | 1..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RB | 18..2496 | 1..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 22..447 | 1..426 | 100 | -> | Plus |
ras-RA | 467..2519 | 427..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RB | 18..2496 | 1..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ras-RA | 22..447 | 1..426 | 100 | -> | Plus |
ras-RA | 467..2519 | 427..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10744523..10744661 | 1..139 | 100 | -> | Plus |
X | 10745678..10745964 | 140..426 | 100 | -> | Plus |
X | 10746076..10746226 | 427..577 | 100 | -> | Plus |
X | 10746421..10747072 | 578..1229 | 100 | -> | Plus |
X | 10747486..10748026 | 1230..1770 | 100 | -> | Plus |
X | 10748098..10748806 | 1771..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10744523..10744661 | 1..139 | 100 | -> | Plus |
X | 10745678..10745964 | 140..426 | 100 | -> | Plus |
X | 10746076..10746226 | 427..577 | 100 | -> | Plus |
X | 10746421..10747072 | 578..1229 | 100 | -> | Plus |
X | 10747486..10748026 | 1230..1770 | 100 | -> | Plus |
X | 10748098..10748806 | 1771..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10744523..10744661 | 1..139 | 100 | -> | Plus |
X | 10745678..10745964 | 140..426 | 100 | -> | Plus |
X | 10746076..10746226 | 427..577 | 100 | -> | Plus |
X | 10746421..10747072 | 578..1229 | 100 | -> | Plus |
X | 10747486..10748026 | 1230..1770 | 100 | -> | Plus |
X | 10748098..10748806 | 1771..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10638556..10638694 | 1..139 | 100 | -> | Plus |
arm_X | 10639711..10639997 | 140..426 | 100 | -> | Plus |
arm_X | 10640109..10640259 | 427..577 | 100 | -> | Plus |
arm_X | 10640454..10641105 | 578..1229 | 100 | -> | Plus |
arm_X | 10641519..10642059 | 1230..1770 | 100 | -> | Plus |
arm_X | 10642131..10642839 | 1771..2479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10754174..10754324 | 427..577 | 100 | -> | Plus |
X | 10753776..10754062 | 140..426 | 100 | -> | Plus |
X | 10754519..10755170 | 578..1229 | 100 | -> | Plus |
X | 10755584..10756124 | 1230..1770 | 100 | -> | Plus |
X | 10756196..10756904 | 1771..2479 | 100 | Plus | |
X | 10752621..10752759 | 1..139 | 100 | -> | Plus |
Translation from 535 to 1875
> LD36080.hyp MDTVTESEMAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPS VMSPTNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVTSRDIDFRENQ PEVLLADIMTTELVTAPNGINLPTANAILEKSKKGKLPIVNQAGELVAMI ARTDLKKARSYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANGVDVII LDSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLR VGMGSGSICITQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGH IVKAIALGASAVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMER GDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGLQHSC QDIGANSINKLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ras-PD | 537 | CG1799-PD | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PE | 537 | CG1799-PE | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PA | 537 | CG1799-PA | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PC | 537 | CG1799-PC | 92..537 | 1..446 | 2273 | 100 | Plus |
Translation from 535 to 1875
> LD36080.pep MDTVTESEMAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPS VMSPTNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVTSRDIDFRENQ PEVLLADIMTTELVTAPNGINLPTANAILEKSKKGKLPIVNQAGELVAMI ARTDLKKARSYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANGVDVII LDSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLR VGMGSGSICITQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGH IVKAIALGASAVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMER GDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGLQHSC QDIGANSINKLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21436-PA | 540 | GF21436-PA | 95..540 | 1..446 | 2345 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18365-PA | 535 | GG18365-PA | 90..535 | 1..446 | 2360 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12599-PA | 543 | GH12599-PA | 98..543 | 1..446 | 2284 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ras-PD | 537 | CG1799-PD | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PE | 537 | CG1799-PE | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PA | 537 | CG1799-PA | 92..537 | 1..446 | 2273 | 100 | Plus |
ras-PC | 537 | CG1799-PC | 92..537 | 1..446 | 2273 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15433-PA | 235 | GI15433-PA | 1..231 | 1..231 | 1170 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26729-PA | 513 | GL26729-PA | 81..513 | 1..446 | 2214 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14756-PA | 526 | GA14756-PA | 81..526 | 1..446 | 2308 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11429-PA | 536 | GM11429-PA | 91..536 | 1..446 | 2377 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16985-PA | 527 | GD16985-PA | 90..527 | 1..446 | 2276 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14720-PA | 556 | GJ14720-PA | 111..556 | 1..446 | 2284 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10285-PA | 541 | GK10285-PA | 96..541 | 1..446 | 2297 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17853-PA | 532 | GE17853-PA | 87..532 | 1..446 | 2364 | 99.3 | Plus |