BDGP Sequence Production Resources |
Search the DGRC for LD36089
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 360 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | Fit1-RA |
Protein status: | LD36089.pep: gold |
Preliminary Size: | 2964 |
Sequenced Size: | 3072 |
Gene | Date | Evidence |
---|---|---|
CG14991 | 2002-05-15 | Blastp of sequenced clone |
Fit1 | 2008-04-29 | Release 5.5 accounting |
Fit1 | 2008-08-15 | Release 5.9 accounting |
Fit1 | 2008-12-18 | 5.12 accounting |
3072 bp (3072 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118556
> LD36089.complete CTCGTTCGCTTTGTCTCGTCGCCCGCGACGTGTTGTTTTGTGAAAATTTG CATCGCATTTTTGAGCGCGTGCATTAGTGTTCGTCGGTGTGTTGATGTGC GAGGAAAAGAGCGAGGAAAACGCTGCGAATTGCGATTGCTAGAGAGATCG GGAAAACAAAACATCCCAAGCAGCAGCAAGCAAGCCATCAAAATCGTAAC CTTGGGCGTGTGTTAATCAAGTGATCCGTACATCCCCGCCTCTCCCCCCC TTTTATCATCATACATACCACCACCATCTCTACATCCAACGATTTTGATC TGGATTACTCGGCTTGTTGGATTGTTGGGTCTGTTTCGCTGGCGTTTCTG TTTCCGTGCAAACATCTGGCGAGATAAGGGCCTATATAGTTTCGCCACCG CCACAGTCGCAGTCCCCCCCTCTCCGCTCCCCGCCAGCCAACGACAACGA CAAGAACAACAAAAACTTGGTTGCAAAAACGGTGCTGAACGTAAGTTGAA TTACGTCATCGTTTCGAGGGCAAATTTAGACTCTGATTGTGCCATATATA TACACTATACAAATATACCCGCAGTTATAGTTTCGCCTTTGGACAGAAGA GACGCCCGCGCATCGGAACTTTTAGCGAAAGATGATTCATGTGGGCGAAA ATACGTGGAACCTGCGGATCCTCATCACGGATCTGCAGGTGGAGAAGACG CTGCGCGTGAAGGGTGACCAGCACATTGGCGGCGTAATGCTGAACCTGGT GGATCCGGAGTTGCCCAAGGATTGGTCCGATCACGCCCTGTGGTGGCCCG CCAAGAATATCTGGCTGACCAGGACGCGGTCCACTTTGGACCAGGCCGGA GTTCAATCGGATTCCTTTCTGCACTTCACGCCCATGCACAAGACACTGAG GGTGCAGATGCCCGATCTTCGTTATCTGGACTACCGCGTCAACTTTTCGG CCAAAACTTTCGGAGCCGTTGTGAGCTTGTGCAAGGACCTGGACATTCGC TATCCGGAGGAACTGTCTTTCTGCAAGCCCCTGGAACCGGAGCATCTGAA GAAGAACTTCTCCAAGCTGCCGCAGCGAAAGATTCCGGTGGCGGAGGCAA ATGGAATCGCATACGTGCAGCCAGCGCTGGACACCAACTCCTTTGTCCCG ATCACAGGAGCCTATAACGGTAGCAATGGCAGCCTGGATCGCTCGCACAA TGGCAATCTGCTGTGCGCTCCGGCTTCACCGTATACCCGACGGGCAGCCA CTGCTCCGGGAACACCCATCAGCTCGCCCACGGGCACCTGGAAGCACAAC TCCACTGGCTATGCTAGCTACGATTCCAACTCTAGTTTCGGAGACCTCCA GGAGAATCTGGCCATGTCGCCAAGGTCGCCCAGTCCGGATGTACGAGCAC GCTTGGTTCGACCCAAGTCCCGGGTGGAGAAAGCCCGTCTCAACGTGGGA TGGTTGGACTCGTCCCTTTCCATCATGGAGCAGGGAGTTAGGGAGTATGA CACTCTGTGCCTGCGCTTCAAATACTTCACGTTCTTCGATCTGAACCCCA AGTACGACCAAGTGAGGATCAATCAACTGTACGAGCAAGCCAAATGGAGC ATTTTGAACGAGGAATTGGAACCCACCGAGGAGGAGACCCTCATGTTTGC CGCCCTGCAGTTCCAGGTGAATCATCAGACGGATCTGCATCCCCCAGGCA TCGATTCCGGAATAGATACCTCCAGTCAGGAGACTGGCGGCGAGGACGAC ATTGACTCCGCTCTCAACGAGCTGCAGATCACACTCGAAGGACCAGGAGG TGGCAAGGATCAGGGCAACATCACCAGGATACCAGAGCTGTCGGACTATT TGAAATTCCTCAAGCCTCAAAGGTTCACCCTTAAAGGATACAAGCGCTAC TTCTTCACCTACAGGGATCTGCATCTGCACCTTTACAAATCGCAGGATGA GTCCAGGCGGGGAGCTCCCACCATCAGCATCAATTTGAAGGGCTGCGAGG TGACGCCCGATGTTAACCTGGCCCAAGGAAAGTTCGCCATCCGTCTGGAA GTTCCGTCAGAGATCAGAAATGGTCCGAACAGTGAGGTCTGGGTGAGATG CGACAACGAAGAGCAGTACGCCAAGTGGATGGCAGCCTGTCGTCTGGCCG CCAAGGGTCGCTCTCTAGCCGATAGCTCTTACGACAGCGAAGTTAGCAGT ATTCGCTCGCTGCTGCAGATGCAGAAACCCGCCCAGGGAGCTCCGCTCAC CGTCAACCCGCGAAGTGTTGAGCCCATGGATTACCTATCGCCCAAAATGA TGCGCAAACTATCCAGCAAGGCGGTGCAGAGGATCCTAGAGGCCCATGCC AACGTTCGCCAGCTGAGCTTAATGGACGCCAAGATGAAGTACATCCAGGC TTGGCAATCTCTACCAGACTTCGGTGTTACTCTCTTCATCATCAAGTTCG ATGGACACAAGAAGGAGGAGCTGTTGGGCGTGGCCAACAATCGTATCATG CGCATGGACCTCAACACCGGCGATCACATAAAGACCTGGCGCTACAACAC AATGAAGGCCTGGAATGTTAACTGGGGCATCAAGTGCATGATGATTCAGC TGCAGGACGAGAACATCGTCTTCTCCGTGCAGTCGGCCGACTGTAAGGTG GTGCACGAGTTCATCGGCGGCTACATATTCATGTCCATGCGATCCAAGGA GAACAACCAGACGCTGAACGAGGAGATGTTCCACAAGCTGACGGGCGGCT GGTCGTAAACGGATTGGCGCAGTCTGGAGCATTGGACTGGAGTCTTGAGT GCCAAGCACAAACCTCGTCGCATGTTCTACAGTTTTATCTACATATATTT ACCTAATGTAGGGTGCGTTGATTTATGGGTTGACTGGTAATCTGTGGACC ACACCAAGCAACTTCTTCGTAACTCTAGTTGTTAGTTTCTCAATGTTTTT TTTCTGTTCGGTTTATCAACCTAAATACGTATATATTTTGTAAACAACTT TGACGGACTAGTGTCCGACACCAGAAGTTGGTTTTCTTTTGTCGGCATTT ACCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fit1-RA | 3555 | Fit1-RA | 63..3127 | 1..3065 | 15325 | 100 | Plus |
Fit1-RB | 3471 | Fit1-RB | 553..3043 | 575..3065 | 12455 | 100 | Plus |
Fit1-RB | 3471 | Fit1-RB | 63..552 | 1..490 | 2450 | 100 | Plus |
Fit2-RA | 2790 | Fit2-RA | 2103..2472 | 2385..2754 | 875 | 82.4 | Plus |
Fit2-RA | 2790 | Fit2-RA | 1124..1389 | 1412..1677 | 640 | 82.7 | Plus |
Fit2-RA | 2790 | Fit2-RA | 329..495 | 632..798 | 430 | 83.8 | Plus |
Fit2-RA | 2790 | Fit2-RA | 1796..1958 | 2078..2240 | 365 | 81.5 | Plus |
Fit2-RA | 2790 | Fit2-RA | 564..633 | 867..936 | 200 | 85.7 | Plus |
Fit2-RA | 2790 | Fit2-RA | 1547..1647 | 1829..1929 | 190 | 79.2 | Plus |
Fit2-RA | 2790 | Fit2-RA | 677..771 | 980..1074 | 175 | 78.9 | Plus |
Fit2-RA | 2790 | Fit2-RA | 1689..1767 | 1971..2049 | 170 | 81 | Plus |
Fit2-RA | 2790 | Fit2-RA | 1997..2084 | 2279..2366 | 170 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4103015..4106068 | 1..3054 | 15270 | 100 | Plus |
chr3L | 24539361 | chr3L | 17014897..17016245 | 1412..2754 | 1850 | 76 | Plus |
chr3L | 24539361 | chr3L | 17014102..17014544 | 632..1074 | 595 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4103629..4106693 | 1..3065 | 15325 | 100 | Plus |
3L | 28110227 | 3L | 17025453..17026801 | 1412..2754 | 1850 | 76 | Plus |
3L | 28110227 | 3L | 17024658..17025100 | 632..1074 | 610 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4103629..4106693 | 1..3065 | 15325 | 100 | Plus |
3L | 28103327 | 3L | 17019532..17019901 | 2385..2754 | 875 | 82.4 | Plus |
3L | 28103327 | 3L | 17018553..17018818 | 1412..1677 | 640 | 82.7 | Plus |
3L | 28103327 | 3L | 17017758..17017924 | 632..798 | 430 | 83.8 | Plus |
3L | 28103327 | 3L | 17019225..17019387 | 2078..2240 | 365 | 81.5 | Plus |
3L | 28103327 | 3L | 17017993..17018062 | 867..936 | 200 | 85.7 | Plus |
3L | 28103327 | 3L | 17018976..17019076 | 1829..1929 | 190 | 79.2 | Plus |
3L | 28103327 | 3L | 17018106..17018200 | 980..1074 | 175 | 78.9 | Plus |
3L | 28103327 | 3L | 17019118..17019196 | 1971..2049 | 170 | 81 | Plus |
3L | 28103327 | 3L | 17019426..17019513 | 2279..2366 | 170 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 3174..3225 | 1519..1570 | 134 | 73.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4103015..4106068 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RB | 1..2127 | 632..2758 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RB | 1..2127 | 632..2758 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 1..2127 | 632..2758 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RB | 1..2127 | 632..2758 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 1..2127 | 632..2758 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 63..3116 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 63..3116 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 66..3119 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 63..3116 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fit1-RA | 66..3119 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4103629..4106682 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4103629..4106682 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4103629..4106682 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4103629..4106682 | 1..3054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4103629..4106682 | 1..3054 | 100 | Plus |
Translation from 631 to 2757
> LD36089.pep MIHVGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDPELPKDWSD HALWWPAKNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLD YRVNFSAKTFGAVVSLCKDLDIRYPEELSFCKPLEPEHLKKNFSKLPQRK IPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDRSHNGNLLCAPASP YTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGDLQENLAMSPRSP SPDVRARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFT FFDLNPKYDQVRINQLYEQAKWSILNEELEPTEEETLMFAALQFQVNHQT DLHPPGIDSGIDTSSQETGGEDDIDSALNELQITLEGPGGGKDQGNITRI PELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDESRRGAPTISI NLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWM AACRLAAKGRSLADSSYDSEVSSIRSLLQMQKPAQGAPLTVNPRSVEPMD YLSPKMMRKLSSKAVQRILEAHANVRQLSLMDAKMKYIQAWQSLPDFGVT LFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMKAWNVNWGI KCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMF HKLTGGWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10098-PA | 711 | GF10098-PA | 1..711 | 1..708 | 3595 | 92.3 | Plus |
Dana\GF10099-PA | 710 | GF10099-PA | 1..710 | 1..708 | 3041 | 78.2 | Plus |
Dana\GF18160-PA | 117 | GF18160-PA | 8..85 | 394..504 | 195 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15193-PA | 711 | GG15193-PA | 1..711 | 1..708 | 3763 | 97.5 | Plus |
Dere\GG13599-PA | 715 | GG13599-PA | 1..715 | 1..708 | 2963 | 75.8 | Plus |
Dere\GG14324-PA | 2836 | GG14324-PA | 275..413 | 548..690 | 156 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14564-PA | 718 | GH14564-PA | 1..718 | 1..708 | 3324 | 87.3 | Plus |
Dgri\GH14500-PA | 708 | GH14500-PA | 1..708 | 1..708 | 2946 | 76 | Plus |
Dgri\GH25291-PA | 96 | GH25291-PA | 1..96 | 613..708 | 493 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fit1-PB | 708 | CG14991-PB | 1..708 | 1..708 | 3748 | 100 | Plus |
Fit1-PA | 708 | CG14991-PA | 1..708 | 1..708 | 3748 | 100 | Plus |
Fit2-PA | 715 | CG7729-PA | 1..715 | 1..708 | 2873 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13891-PA | 714 | GI13891-PA | 1..714 | 1..708 | 3341 | 86 | Plus |
Dmoj\GI13275-PA | 708 | GI13275-PA | 1..708 | 1..708 | 2999 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17086-PA | 711 | GL17086-PA | 1..711 | 1..708 | 3587 | 91.8 | Plus |
Dper\GL16192-PA | 711 | GL16192-PA | 1..711 | 1..708 | 2996 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13408-PA | 711 | GA13408-PA | 1..711 | 1..708 | 3587 | 91.8 | Plus |
Dpse\GA20549-PA | 711 | GA20549-PA | 1..711 | 1..708 | 2997 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14624-PA | 711 | GM14624-PA | 1..711 | 1..708 | 3781 | 97.9 | Plus |
Dsec\GM25681-PA | 715 | GM25681-PA | 1..715 | 1..708 | 2948 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13812-PA | 711 | GD13812-PA | 1..711 | 1..708 | 3794 | 98.5 | Plus |
Dsim\GD14686-PA | 586 | GD14686-PA | 1..568 | 1..560 | 2206 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11745-PA | 715 | GJ11745-PA | 1..715 | 1..708 | 3422 | 87.8 | Plus |
Dvir\GJ12044-PA | 707 | GJ12044-PA | 1..707 | 1..708 | 2976 | 76.8 | Plus |
Translation from 631 to 2757
> LD36089.hyp MIHVGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDPELPKDWSD HALWWPAKNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLD YRVNFSAKTFGAVVSLCKDLDIRYPEELSFCKPLEPEHLKKNFSKLPQRK IPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDRSHNGNLLCAPASP YTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGDLQENLAMSPRSP SPDVRARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFT FFDLNPKYDQVRINQLYEQAKWSILNEELEPTEEETLMFAALQFQVNHQT DLHPPGIDSGIDTSSQETGGEDDIDSALNELQITLEGPGGGKDQGNITRI PELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDESRRGAPTISI NLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWM AACRLAAKGRSLADSSYDSEVSSIRSLLQMQKPAQGAPLTVNPRSVEPMD YLSPKMMRKLSSKAVQRILEAHANVRQLSLMDAKMKYIQAWQSLPDFGVT LFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMKAWNVNWGI KCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMF HKLTGGWS*