BDGP Sequence Production Resources |
Search the DGRC for LD36125
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 361 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | borr-RA |
Protein status: | LD36125.pep: gold |
Preliminary Size: | 1387 |
Sequenced Size: | 1249 |
Gene | Date | Evidence |
---|---|---|
CG4454 | 2001-01-01 | Release 2 assignment |
CG4454 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4454 | 2003-02-27 | Blastp of sequenced clone |
Borr | 2008-04-29 | Release 5.5 accounting |
Borr | 2008-08-15 | Release 5.9 accounting |
borr | 2008-12-18 | 5.12 accounting |
1249 bp (1249 high quality bases) assembled on 2003-02-27
GenBank Submission: AY061432
> LD36125.complete AAAAAGACGACGCTTGCTACGAAAATAGTTATTCCTCGCAAAAACCCTGT AACGTGTAAACAAAGGCCGCTGCCACGATGCCGCGCACCAAGATACCAAA GAACTCCAAACGCAACCGCGAGGTGGCCAATCGCGAAGAGAAGGTGCGCC TGTACGAGCTGAAAATGGATTCCCGCCTTATCAGCATCGATTCGCTGGAG ACCAAGTTCCTCTCCGCCGTGGACCACCAGGTGAAGACACTGCTCGGCCA GGTGCAGAAGGAGCTGGCCAATCTGAAGATGCCCGAAGTGCTGCGCCTCT TCGAGGAACTGGACCGCTTCAGCGACTTCAAGGCCAGCGATCAGACGCAG CTGCTCGCCTCGATGTCCATGAGTGGCAGCGCCATCGAGGGCCACGCCCC CTCCGCCACTGGAAGTCGCAATGACGAAGAGGACAGCAGCATCGGTGCCA GCGGTGGGAGCATCCTGGCCGCCCACACAGGCTCCCTGCTGCGGTCCACG AAGGCCATGCGCACACCCGGACCACTGCACTCGGCGAGGGCTCGTCGAGC GCGGCGCAGTCGTTCCGCCTGCGGGGATCTCAACATATTGCACTCGGCCA AACCGCCGTCAATTTCGAGCAGCAGCAGCAGCAGCCGCAATTCGCGCAGC AAACTGCGCACACCGATGGCCTCGCGTGCGAAGGCCTTCAGTGCCGACCG CACTCCTTTGAAACAGAAGCAAATGCGCTCCGGATCGCCAACTACACCGC CGATGGCATTCCTGCGCTATCCCAAGCCCGGCGAGGTGGCACTATCCAAA TACGGCAGTCCCATGGTGGCTCAAGTAATGCCAGACAAGTTCGCCAATGT GAACATACCCATTCGGAACGGAGTTCTTAGCTTGCGGCCCAAAAAACTGG ATGCCGACGAGGTGGAGTCAAATCTGTTGGAGAACCTGGACGAGGACACC CTTAACCAGATCAAAACGCTGCACGAGAACTTGCAGATGATTGTTAATAA GGCCAGCCAGGCGGTGTTCAAGTAGCTGTCATTTCAAACGCTTATCTAGA TATAATGCTATATCATATATTTTAATACGTTTCGTTTAAGTTCAGTTTTC ATTTTACTCATTTAGTTCAAGTATTTTGTCTTTATTCATAAAAATCTATC GTATTTGCATAAGTTTCAATACATGTTCATATCCAAGTGTACGGCGATTT AAATGTAATGTTTTAAATACATGCTTAATCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
borr.a | 1642 | borr.a | 54..1297 | 1..1244 | 6220 | 100 | Plus |
borr-RB | 1411 | borr-RB | 497..1313 | 428..1244 | 4085 | 100 | Plus |
borr.b | 1654 | borr.b | 493..1309 | 428..1244 | 4085 | 100 | Plus |
borr-RB | 1411 | borr-RB | 58..486 | 1..429 | 2145 | 100 | Plus |
borr.b | 1654 | borr.b | 54..482 | 1..429 | 2145 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9251566..9251994 | 429..1 | 2145 | 100 | Minus |
chr2L | 23010047 | chr2L | 9250403..9250807 | 1231..827 | 2025 | 100 | Minus |
chr2L | 23010047 | chr2L | 9250873..9251271 | 826..428 | 1995 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9252635..9253063 | 429..1 | 2145 | 100 | Minus |
2L | 23513712 | 2L | 9251459..9251876 | 1244..827 | 2090 | 100 | Minus |
2L | 23513712 | 2L | 9251942..9252340 | 826..428 | 1995 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9252635..9253063 | 429..1 | 2145 | 100 | Minus |
2L | 23513712 | 2L | 9251459..9251876 | 1244..827 | 2090 | 100 | Minus |
2L | 23513712 | 2L | 9251942..9252340 | 826..428 | 1995 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9250403..9250807 | 827..1231 | 100 | <- | Minus |
chr2L | 9250873..9251269 | 430..826 | 100 | <- | Minus |
chr2L | 9251566..9251994 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 1..948 | 78..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 1..948 | 78..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 1..948 | 78..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Borr-RA | 1..948 | 78..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 1..948 | 78..1025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 54..1284 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 51..1281 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 56..1286 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Borr-RA | 54..1284 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
borr-RA | 56..1286 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9251472..9251876 | 827..1231 | 100 | <- | Minus |
2L | 9251942..9252338 | 430..826 | 100 | <- | Minus |
2L | 9252635..9253063 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9251472..9251876 | 827..1231 | 100 | <- | Minus |
2L | 9251942..9252338 | 430..826 | 100 | <- | Minus |
2L | 9252635..9253063 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9251472..9251876 | 827..1231 | 100 | <- | Minus |
2L | 9251942..9252338 | 430..826 | 100 | <- | Minus |
2L | 9252635..9253063 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9251472..9251876 | 827..1231 | 100 | <- | Minus |
arm_2L | 9251942..9252338 | 430..826 | 100 | <- | Minus |
arm_2L | 9252635..9253063 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9251472..9251876 | 827..1231 | 100 | <- | Minus |
2L | 9251942..9252338 | 430..826 | 100 | <- | Minus |
2L | 9252635..9253063 | 1..429 | 100 | Minus |
Translation from 77 to 1024
> LD36125.pep MPRTKIPKNSKRNREVANREEKVRLYELKMDSRLISIDSLETKFLSAVDH QVKTLLGQVQKELANLKMPEVLRLFEELDRFSDFKASDQTQLLASMSMSG SAIEGHAPSATGSRNDEEDSSIGASGGSILAAHTGSLLRSTKAMRTPGPL HSARARRARRSRSACGDLNILHSAKPPSISSSSSSSRNSRSKLRTPMASR AKAFSADRTPLKQKQMRSGSPTTPPMAFLRYPKPGEVALSKYGSPMVAQV MPDKFANVNIPIRNGVLSLRPKKLDADEVESNLLENLDEDTLNQIKTLHE NLQMIVNKASQAVFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22038-PA | 318 | GF22038-PA | 1..318 | 1..315 | 1151 | 74.1 | Plus |
Dana\GF22049-PA | 218 | GF22049-PA | 87..214 | 179..311 | 232 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24035-PA | 312 | GG24035-PA | 1..312 | 1..315 | 1553 | 95.6 | Plus |
Dere\GG24036-PA | 218 | GG24036-PA | 88..212 | 175..311 | 259 | 40.7 | Plus |
Dere\GG24036-PA | 218 | GG24036-PA | 1..85 | 1..87 | 164 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13640-PA | 316 | GH13640-PA | 1..316 | 1..315 | 905 | 61.8 | Plus |
Dgri\GH13271-PA | 183 | GH13271-PA | 1..183 | 138..315 | 582 | 70.8 | Plus |
Dgri\GH13272-PA | 225 | GH13272-PA | 87..221 | 173..311 | 267 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
borr-PA | 315 | CG4454-PA | 1..315 | 1..315 | 1564 | 100 | Plus |
borr-PB | 319 | CG4454-PB | 1..319 | 1..315 | 1549 | 98.7 | Plus |
aust-PB | 216 | CG17009-PB | 88..210 | 175..311 | 236 | 41.4 | Plus |
aust-PA | 216 | CG17009-PA | 88..210 | 175..311 | 236 | 41.4 | Plus |
aust-PB | 216 | CG17009-PB | 1..98 | 1..99 | 178 | 41 | Plus |
aust-PA | 216 | CG17009-PA | 1..98 | 1..99 | 178 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11901-PA | 324 | GI11901-PA | 1..324 | 1..315 | 949 | 63.7 | Plus |
Dmoj\GI11912-PA | 221 | GI11912-PA | 87..217 | 174..311 | 278 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25535-PA | 318 | GL25535-PA | 1..318 | 1..315 | 1164 | 74.5 | Plus |
Dper\GL21274-PA | 226 | GL21274-PA | 87..222 | 175..311 | 215 | 38.7 | Plus |
Dper\GL10058-PA | 226 | GL10058-PA | 87..222 | 175..311 | 202 | 38 | Plus |
Dper\GL19675-PA | 226 | GL19675-PA | 87..222 | 175..311 | 199 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18196-PA | 318 | GA18196-PA | 1..318 | 1..315 | 1169 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12517-PA | 314 | GM12517-PA | 1..314 | 1..315 | 1614 | 98.7 | Plus |
Dsec\GM12528-PA | 217 | GM12528-PA | 86..211 | 173..311 | 244 | 38.8 | Plus |
Dsec\GM12528-PA | 217 | GM12528-PA | 1..74 | 1..74 | 168 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22362-PA | 315 | GD22362-PA | 1..315 | 1..315 | 1626 | 98.7 | Plus |
Dsim\GD22363-PA | 216 | GD22363-PA | 86..210 | 173..311 | 238 | 38.7 | Plus |
Dsim\GD22363-PA | 216 | GD22363-PA | 1..74 | 1..74 | 168 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14013-PA | 325 | GJ14013-PA | 1..325 | 1..315 | 951 | 65.2 | Plus |
Dvir\GJ14024-PA | 220 | GJ14024-PA | 89..216 | 175..311 | 263 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15062-PA | 331 | GK15062-PA | 1..331 | 1..315 | 852 | 58.2 | Plus |
Dwil\GK15971-PA | 257 | GK15971-PA | 1..257 | 30..315 | 489 | 43.9 | Plus |
Dwil\GK15063-PA | 144 | GK15063-PA | 59..142 | 225..310 | 174 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10577-PA | 313 | GE10577-PA | 1..313 | 1..315 | 1601 | 97.8 | Plus |
Dyak\GE10588-PA | 218 | GE10588-PA | 88..212 | 175..311 | 257 | 42.1 | Plus |
Dyak\GE10588-PA | 218 | GE10588-PA | 1..74 | 1..74 | 165 | 47.3 | Plus |
Translation from 77 to 1024
> LD36125.hyp MPRTKIPKNSKRNREVANREEKVRLYELKMDSRLISIDSLETKFLSAVDH QVKTLLGQVQKELANLKMPEVLRLFEELDRFSDFKASDQTQLLASMSMSG SAIEGHAPSATGSRNDEEDSSIGASGGSILAAHTGSLLRSTKAMRTPGPL HSARARRARRSRSACGDLNILHSAKPPSISSSSSSSRNSRSKLRTPMASR AKAFSADRTPLKQKQMRSGSPTTPPMAFLRYPKPGEVALSKYGSPMVAQV MPDKFANVNIPIRNGVLSLRPKKLDADEVESNLLENLDEDTLNQIKTLHE NLQMIVNKASQAVFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
borr-PA | 315 | CG4454-PA | 1..315 | 1..315 | 1564 | 100 | Plus |
borr-PB | 319 | CG4454-PB | 1..319 | 1..315 | 1549 | 98.7 | Plus |
aust-PB | 216 | CG17009-PB | 88..210 | 175..311 | 236 | 41.4 | Plus |
aust-PA | 216 | CG17009-PA | 88..210 | 175..311 | 236 | 41.4 | Plus |
aust-PB | 216 | CG17009-PB | 1..98 | 1..99 | 178 | 41 | Plus |
aust-PA | 216 | CG17009-PA | 1..98 | 1..99 | 178 | 41 | Plus |