Clone LD36155 Report

Search the DGRC for LD36155

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:361
Well:55
Vector:pOT2
Associated Gene/Transcripttho2-RA
Protein status:LD36155.pep: gold
Preliminary Size:1409
Sequenced Size:5411

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
tho2 2008-04-29 Release 5.5 accounting
tho2 2008-04-29 Picked prior to 5.5
tho2 2008-08-15 Release 5.9 accounting
tho2 2008-12-18 5.12 accounting

Clone Sequence Records

LD36155.complete Sequence

5411 bp assembled on 2007-10-17

GenBank Submission: BT031136

> LD36155.complete
AGCAGTACGGTCACACTGGCGGAACTAACTAAAAAAAAGTGTGAAAATTT
GTCAAATATTTCGACAAGTACAACGATCTAATCGATTCGGGAGCAGAATT
CAGCCCCCGCAGCAAAGCGCCCGCGTGTACCACCTGATCCGAGGATGCAG
AGATCCACAGACCGGTTGCGCCGGCTGAAAAAGCTGAAGAGCGTTACGGG
AGCGCAGGATGGCGTTGGTGGCGGCGATGCGGCGGCGACGGCGGATAATC
GGACCTCCGCATCGTCGGACACGAACGGAGCAGCCGCCAGTAGCGGAGCC
GGCGGCAATCAGCCAGGCACACTCAATCCGGAGGTCTTCAAGCACTTGGA
CAAATCCGGACGCAGTGAATTCCTGAAGTACCTCAAGCATCAGTTGCAGG
ATGCGGCGGATACGCCCGTTTACGACAAGAACGGCGTCTTTAAGCAGGGC
ATCTCCAATGCCATATACCAGCTTCTTTGGCAGACTCTGCGCTTCACTCA
CAAAAAAGACATAGTACTCCACCTGCTCCTGGAAGTCGTGGCCCTCCATG
CGGACTTTCCCAGCCTTATAGTGGACGTGGTTAACATTCTGGACAGCGAA
ACCTCCCTTATAACCGATGGACTTCAGGAAGAACGACATGCCTTTGTGCA
ACTTGTTAAAGACTTGGACAGGGTGATTCCAGAAAGTCTTTTGAAAGAAC
GTTTGGAAATCGATACGTTGCAGGAGGCGGGAATCGTCAAGAACAAGAGC
TTTTACTCTAAGTTCATCAAGGTCAAAACCAAGCTATACTACAAGCAGCG
TCGGTTTAACCTTTTCCGCGAGGAGAGTGAAGGGTTTGCCAAGCTTATCA
CAGAGCTAAACCAGGAGTTCGACGAGAACACCACTCCAGAGAGCATAATG
GATATCATAAAATCCCTTATAGGCTGCTTCAATCTGGATCCTAATCGTGT
GCTGGACATTATTATCGAGTCCTTTGAAACTCGTCCGGATCGATGGAACT
TGTTCATACCCCTGCTGCGCAGCTACATGCCCACTGGTGCCATTATTTGC
GAAGTCCTCGGCTACAAGTTCTGCCACTTTAAGGACTCCCGCACTCCCCG
CTCGTTATATCATGTATGTGCTCTTTTGCTTAAGCATGGCGTCATTGCTC
TGAACGATGTATACGTGTGGTTGACTCCAAACGATGGGAGCATTAAGGCG
GACTGGGAGGAAGACCTGGCTGATGCCAGGGAAATGGTCCGCAAGCTGAA
CCTTATACAAACCAATAAGAAGGAAGACGAAAAGGATCCACCACCGCCGC
CTTCAGTTAAGAAGTTCAATGAGGAAAAATACAATGCAAACCAAAAATTT
GGCCTCTGCGAAGCTTTGCTTAAAGTTGGCGACTGGGAGAATGCGTACAA
GATCATCCAGAAGCTTCCCGAGCAGGCGGTTGTATTGCAGGAACCCATTG
CCCGTGCCATTGCCGATCTGATTCACCTGTCCGTGGAGAATATTTATTAC
AAAAAGTGTTTTAAGGCTCCCGCAGGACGTAGGCCGAGCCGCAATCGCCT
GTATGAGGATTCCAAGTTGGTGGCCAAGATGCAGGCAAAGGAATTCGGCG
ACTTAAGGAAGTACACCTGGCCGATGGCTAACGTGTTGGGACCTGCCATG
CACTACGACACTGTGCTGATGTACAAACTAATCCGTATTATGCGGAAACT
AGTTGTCGATATGGGCGTGGACAGCCTAAATGGACCTCCGCCGAATTCGG
AAGCAGAGCAGCACTACTATGACATTATGAGCTCGCTGGACGCCTGCATT
CTACCCTCCCTTCTATACTTGGACAACAACTGTTCCATGTCCGAAGAGAT
CTGGGCTGTGCTTAAATATTTCCCGTATCATTTTCGCTACAGTTTGTATG
CGCGTTGGAAGAACGACAGCTATCAGCTGCATCCCAATTTGATCAGGAGA
TGTGGATTGGCACAACGGGATATTAAGGCCCTAATGAAGCGCGTGAGCAA
GGAGAACGTCAAGCAGCTGGGACGACTGGTAGGAAAGTATAGCCATTGTG
CGCCAGGACTGCTTTTCGACTATATTCTCTTGCAAATTCAAATCTATGAT
AATCTAATTGGTCCGGTCTGCGACCTGCTCAAGTATCTTACTGCCTTATC
CTTTGACTGTTTGGGATACTGCATCATCGAGTCGTTGACGTTAACAGGTC
GTCTCAGGTTCAAGGATGACGGCACTTCGTTATCCTTGTGGCTGCAAAGT
CTTGCCTCCTTCTGCGGCACCATATACAAGAAGTACAGCATTGAGCTAAG
TGGTCTGCTTCAGTATGTGGCCAATCAGTTAAAGTCGCAGAAGAGCCTGG
ACTTACTGATTCTGAGGGAGATCGTGCATAAGATGGCAGGCGTGGAGTCC
TGCGAGGAGATGACTAATGATCAGTTGCAAGCCATGTGTGGTGGTGAGCA
GCTCAGGGGAGAGGCTGGCTACTTTAGTCAAGTGAGGAATACGAAAAAGT
CCTCTAATCGCCTAAAGGAGGCATTGGCCAATAACGATCTTGCCGTGGCT
ATTTGCCTTTTGATGGCTCAACAGAAACACTGCGTCATTTATCGTGAGAC
GGCGGCACACAGCCATTTGAAGTTAGTGGGAAATCTGTATGATCAGTGCC
AAGACACACTCGTCCAGTTTGGTACGTTCCTAGGCTCCACCTATTCTGTG
GATGAGTATGTGGAGCGGTTGCCCTCGATTATAACCATGCTTCGAGAGTA
CCACATAAACACGGATGTGGCCTTCTTCTTGGCTAGGCCCATGTTTACTC
ATCAGATCAATCAAAAATATGATCAATTGCGCAAGGATGACCCTAACGCC
AAGAAGCTCACCACGACGCAAAAGCTCCAGAAGTATTTGGAAGCTACGCA
GCTGATCATGAACCCTATTGTAGAGTCTGTTCGTCCACTGCACAGCTCCA
AGGTGTGGGAGGACATTAGTCCGCAGTTCCTGGTAACTTTTTGGAGTCTG
AGCATGTACGATCTGCACGTGCCGAACGAAAGCTATCAGAGGGAGGTTGC
CAAGCTAAAGCAGCTGGCCCAGCAAGCGGCAGAAGGCAAAGACTCTAACC
AATCTAAGAACAAGAAGGAGCAGGAGCGCTACATTGCGCTAATGGAGAAG
CTGAACGACGAGCGAAAGAAGCAGCATGAGCACGTTGACAAGATCTCGCA
GCGTTTGCAGGAGCAAAAAGATAGTTGGTTCCTTCTACGATCTGGCAAGT
CCGCAAAGAACGACACCATCACGCAATTCCTGCAGCTCTGTCTCTTCCCG
CGTTGCACCTTCACAGCTCTGGATGCGTTGTATTGCGCGAAGTTCGTGCA
CACCATCCACAATCTCAAGACATCGAACTTCTCAACCTTGCTGTGCTATG
ATAGGATCTTTTGTGACATCACTTATTCGGTAACATCGTGCACTGAGGGC
GAGGCTACGCGGTACGGACGCTTTTTGTGCGCCATGCTCGAGACCGTGAT
GCGTTGGCATGCGGATCAGGCGGTGTTTAATAAGGAGTGCGCCAATTATC
CTGGTTTTGTGACAAAGTTTCGTGTTAGCAATCAGTTCTCAGAGGCCAAC
GATCATGTTGGCTACGAAAACTATCGGCATGTGTGTCACAAGTGGCACTA
CAAGATTACCAAGGCGATTGTATTCTGTCTGGACTCGAAGGACTTTATGC
AGATCAGAAACGCACTGATCATCCTAATGCGAATACTGCCTCACTATCCA
GTTCTTTCCAAACTGGCGCAAATCATCGAGCGTAAGGTGGACAAGGTGCG
CGAGGAGGAGAAGACAAAGCGACCGGATCTGTATGCCATTGCCTCCAGCT
ACATTGGACAACTAAAGCTGAAGACTCCCCACATGCTAAAGGAGAGTGTC
TTTCATCAAATCGCCGAGCGGCCGAATAAGGAGTCGCCGACCAGTGTTGG
CGCTCCCGCCGCAGCCACCAGATCCGATAAGTTGTCACCCACCTCTCCAT
CTGGGAATACACAAGGAACAAGGGCTCCAGGCGGAGCTGCTCCTTTCTAC
AACAGCGAACAAAAGTCGGTGATCAAAGAACCAGATGCAAAAGCAGCCTC
CACAACGCGTGAATCGAAGAGCCAAAGAGGCGAGGGCAATAATGTCACTT
TGGTGTCCACAGCCACTTCAACGGCATCCAATAACGAACGCGAGAGCAAA
CAACGTGACCTGCCAGCGCCACGTGAGTCCCAATCCCGCAGCAAGGATGA
CCAGCAGGAGCAGGCAAACAACGGCAGTAATGGCAGCCGACAGAGCGAGA
GTCGTAATAGAGATGTGGAACGAGACCGACATGATCAGCAAGACCAACGA
AGCATTAGTAGCCATCGCAGTTCCAGAGACATTGTGCGGGTCAAGGAGCG
CACAGAAGCCGAGCTGCATCAGAGGTCGCGGGAACGTTCTCAACGTCTGG
AGGAGTTGGAAGCGCAGCAGCGGAAGCGGGAAAAAACATCGCGACGGGGC
GGCGAAGAGCGCATCCGACATGGTGATGGCGTCGAGACAGTGGACCTGGT
GGGCAGCACCGACAATCGCCACTACGAGGAGTTCGAGGGGCGTATGAGGG
ACCTGAGCTCAGTGTCCAACGAGAGCAACGGTTCGTTGCACCATCGACAA
CGTAGCCATGAGACCATTGAATTTGAAAAGGATTCAAAGCGTCGCAAATT
GGAGTCATCAACCAGCAGTTCAAAGAAGGTGGAAGAACTGGTGGACAGCG
TAAAGAAGGCGCGCGCCCTTAAGACCAAAGAGCGCAACAAGGACAAACTG
TCGGATGAGGAGCGAGACGCTCGCAAGGATCGCAAGCTGGGACGCAAGCG
GGATCGCGTCGACGAGTCCAACAGCAACGAACATAAACGCCGGCGCGAAG
GACAAAACGGTGAAGAAGAGCTGCGGGATAGAGAGCGGCATAGGGAGAAG
TCACCGCGGGAGCGATCACATGAAAAGTTCGATAGAGAAAGAGGAGGAGC
CAGCGGTTCGCGGGCCGAGGAGCGGCAGTACATCAGCAAGTCCGCTCGGT
CCTCCAGAGTCAACTATTGATTGCACTCCGGGCTTTTGCTTGCCCGTTCC
GTGCATTGTGAAGCGCATTTTGTTTAACTTTTAAAGAATTTGGAATGGCC
TTTCCATCCATTGTAGCAAAGAACGAAACTACTTTTGAAATGTTTACAAG
TTTTAGTGACTATTTTAAAACAGAGATCCAAACAATTACATTGTAAAAAT
GACTACATTTTTGTGTTGTTTACTAAACGGGAACTGTAATAGCCATAATA
TTTGTATAAAAAGTTCATTCCCCAAATAGATGTTCAGATTGTCTTTAAAA
CAAATAATAAATTGTTCATTTGCAATGAGATTAAGATGTAAAAAAAAAAA
AAAAAAAAAAA

LD36155.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
tho2-RA 5526 tho2-RA 122..5513 1..5392 26960 100 Plus
tho2-RB 5392 tho2-RB 1..5392 1..5389 26890 99.9 Plus
tho2.a 5614 tho2.a 122..5066 1..4945 24725 100 Plus
tho2.a 5614 tho2.a 5153..5601 4944..5392 2245 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:36:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2142385..2143136 2073..1322 3760 100 Minus
chr2L 23010047 chr2L 2140123..2140814 4096..3405 3445 99.9 Minus
chr2L 23010047 chr2L 2140872..2141465 3405..2812 2970 100 Minus
chr2L 23010047 chr2L 2139471..2140057 4681..4095 2935 100 Minus
chr2L 23010047 chr2L 2137093..2137538 5389..4944 2230 100 Minus
chr2L 23010047 chr2L 2143191..2143594 1324..921 2020 100 Minus
chr2L 23010047 chr2L 2141933..2142323 2464..2074 1940 99.7 Minus
chr2L 23010047 chr2L 2144548..2144918 371..1 1855 100 Minus
chr2L 23010047 chr2L 2141528..2141877 2811..2462 1675 98.6 Minus
chr2L 23010047 chr2L 2143858..2144110 792..540 1250 99.6 Minus
chr2L 23010047 chr2L 2137726..2137903 4901..4724 890 100 Minus
chr2L 23010047 chr2L 2144199..2144368 541..372 850 100 Minus
chr2L 23010047 chr2L 2143662..2143796 923..789 675 100 Minus
chr2L 23010047 chr2L 2137625..2137671 4945..4899 235 100 Minus
chr2L 23010047 chr2L 2139373..2139417 4725..4681 225 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:30:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2142642..2143393 2073..1322 3760 100 Minus
2L 23513712 2L 2140380..2141071 4096..3405 3460 100 Minus
2L 23513712 2L 2141129..2141722 3405..2812 2970 100 Minus
2L 23513712 2L 2139728..2140314 4681..4095 2935 100 Minus
2L 23513712 2L 2137347..2137795 5392..4944 2245 100 Minus
2L 23513712 2L 2143448..2143851 1324..921 2020 100 Minus
2L 23513712 2L 2142190..2142580 2464..2074 1955 100 Minus
2L 23513712 2L 2144805..2145175 371..1 1855 100 Minus
2L 23513712 2L 2141785..2142134 2811..2462 1750 100 Minus
2L 23513712 2L 2144115..2144367 792..540 1250 99.6 Minus
2L 23513712 2L 2137983..2138160 4901..4724 890 100 Minus
2L 23513712 2L 2144456..2144625 541..372 850 100 Minus
2L 23513712 2L 2143919..2144053 923..789 675 100 Minus
2L 23513712 2L 2137882..2137928 4945..4899 235 100 Minus
2L 23513712 2L 2139630..2139674 4725..4681 225 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2142642..2143393 2073..1322 3760 100 Minus
2L 23513712 2L 2140380..2141071 4096..3405 3460 100 Minus
2L 23513712 2L 2141129..2141722 3405..2812 2970 100 Minus
2L 23513712 2L 2139728..2140314 4681..4095 2935 100 Minus
2L 23513712 2L 2137347..2137795 5392..4944 2245 100 Minus
2L 23513712 2L 2143448..2143851 1324..921 2020 100 Minus
2L 23513712 2L 2142190..2142580 2464..2074 1955 100 Minus
2L 23513712 2L 2144805..2145175 371..1 1855 100 Minus
2L 23513712 2L 2141785..2142134 2811..2462 1750 100 Minus
2L 23513712 2L 2144115..2144367 792..540 1250 99.6 Minus
2L 23513712 2L 2137983..2138160 4901..4724 890 100 Minus
2L 23513712 2L 2144456..2144625 541..372 850 100 Minus
2L 23513712 2L 2143919..2144053 923..789 675 100 Minus
2L 23513712 2L 2137882..2137928 4945..4899 235 100 Minus
2L 23513712 2L 2139630..2139674 4725..4681 225 100 Minus
Blast to na_te.dros performed on 2019-03-16 05:36:14 has no hits.

LD36155.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:37:19 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2143862..2144109 541..788 100 <- Minus
chr2L 2144200..2144368 372..540 100 <- Minus
chr2L 2137727..2137901 4726..4900 100 <- Minus
chr2L 2139373..2139416 4682..4725 100 <- Minus
chr2L 2137093..2137537 4945..5389 100 <- Minus
chr2L 2137626..2137669 4901..4944 100 <- Minus
chr2L 2139471..2140055 4097..4681 100 <- Minus
chr2L 2140123..2140813 3406..4096 99 <- Minus
chr2L 2140872..2141465 2812..3405 100 <- Minus
chr2L 2141528..2141875 2464..2811 98 <- Minus
chr2L 2141934..2142323 2074..2463 99 <- Minus
chr2L 2142385..2143134 1324..2073 100 <- Minus
chr2L 2143192..2143592 923..1323 100 <- Minus
chr2L 2143663..2143796 789..922 100 <- Minus
chr2L 2144548..2144918 1..371 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:18:33 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..4926 145..5070 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:48 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..4926 145..5070 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:21:11 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..4926 145..5070 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:51:08 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..4926 145..5070 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:08:24 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..4926 145..5070 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:57:08 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..5389 1..5389 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:48 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..5389 1..5389 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:21:11 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 13..5401 1..5389 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:51:08 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 1..5389 1..5389 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:08:24 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
tho2-RA 13..5401 1..5389 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:19 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2144119..2144366 541..788 100 <- Minus
2L 2144457..2144625 372..540 100 <- Minus
2L 2144805..2145175 1..371 100   Minus
2L 2137350..2137794 4945..5389 100 <- Minus
2L 2137883..2137926 4901..4944 100 <- Minus
2L 2137984..2138158 4726..4900 100 <- Minus
2L 2139630..2139673 4682..4725 100 <- Minus
2L 2139728..2140312 4097..4681 100 <- Minus
2L 2140380..2141070 3406..4096 100 <- Minus
2L 2141129..2141722 2812..3405 100 <- Minus
2L 2141785..2142132 2464..2811 100 <- Minus
2L 2142191..2142580 2074..2463 100 <- Minus
2L 2142642..2143391 1324..2073 100 <- Minus
2L 2143449..2143849 923..1323 100 <- Minus
2L 2143920..2144053 789..922 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:19 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2144119..2144366 541..788 100 <- Minus
2L 2144457..2144625 372..540 100 <- Minus
2L 2144805..2145175 1..371 100   Minus
2L 2137350..2137794 4945..5389 100 <- Minus
2L 2137883..2137926 4901..4944 100 <- Minus
2L 2137984..2138158 4726..4900 100 <- Minus
2L 2139630..2139673 4682..4725 100 <- Minus
2L 2139728..2140312 4097..4681 100 <- Minus
2L 2140380..2141070 3406..4096 100 <- Minus
2L 2141129..2141722 2812..3405 100 <- Minus
2L 2141785..2142132 2464..2811 100 <- Minus
2L 2142191..2142580 2074..2463 100 <- Minus
2L 2142642..2143391 1324..2073 100 <- Minus
2L 2143449..2143849 923..1323 100 <- Minus
2L 2143920..2144053 789..922 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:19 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2144119..2144366 541..788 100 <- Minus
2L 2144457..2144625 372..540 100 <- Minus
2L 2144805..2145175 1..371 100   Minus
2L 2137350..2137794 4945..5389 100 <- Minus
2L 2137883..2137926 4901..4944 100 <- Minus
2L 2137984..2138158 4726..4900 100 <- Minus
2L 2139630..2139673 4682..4725 100 <- Minus
2L 2139728..2140312 4097..4681 100 <- Minus
2L 2140380..2141070 3406..4096 100 <- Minus
2L 2141129..2141722 2812..3405 100 <- Minus
2L 2141785..2142132 2464..2811 100 <- Minus
2L 2142191..2142580 2074..2463 100 <- Minus
2L 2142642..2143391 1324..2073 100 <- Minus
2L 2143449..2143849 923..1323 100 <- Minus
2L 2143920..2144053 789..922 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:21:11 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2141785..2142132 2464..2811 100 <- Minus
arm_2L 2142191..2142580 2074..2463 100 <- Minus
arm_2L 2137350..2137794 4945..5389 100 <- Minus
arm_2L 2137883..2137926 4901..4944 100 <- Minus
arm_2L 2137984..2138158 4726..4900 100 <- Minus
arm_2L 2139630..2139673 4682..4725 100 <- Minus
arm_2L 2139728..2140312 4097..4681 100 <- Minus
arm_2L 2140380..2141070 3406..4096 100 <- Minus
arm_2L 2141129..2141722 2812..3405 100 <- Minus
arm_2L 2142642..2143391 1324..2073 100 <- Minus
arm_2L 2143449..2143849 923..1323 100 <- Minus
arm_2L 2143920..2144053 789..922 100 <- Minus
arm_2L 2144119..2144366 541..788 100 <- Minus
arm_2L 2144457..2144625 372..540 100 <- Minus
arm_2L 2144805..2145175 1..371 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:55 Download gff for LD36155.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2137350..2137794 4945..5389 100 <- Minus
2L 2137883..2137926 4901..4944 100 <- Minus
2L 2137984..2138158 4726..4900 100 <- Minus
2L 2139630..2139673 4682..4725 100 <- Minus
2L 2139728..2140312 4097..4681 100 <- Minus
2L 2140380..2141070 3406..4096 100 <- Minus
2L 2141129..2141722 2812..3405 100 <- Minus
2L 2141785..2142132 2464..2811 100 <- Minus
2L 2142191..2142580 2074..2463 100 <- Minus
2L 2142642..2143391 1324..2073 100 <- Minus
2L 2143449..2143849 923..1323 100 <- Minus
2L 2143920..2144053 789..922 100 <- Minus
2L 2144119..2144366 541..788 100 <- Minus
2L 2144457..2144625 372..540 100 <- Minus
2L 2144805..2145175 1..371 100   Minus

LD36155.pep Sequence

Translation from 144 to 5069

> LD36155.pep
MQRSTDRLRRLKKLKSVTGAQDGVGGGDAAATADNRTSASSDTNGAAASS
GAGGNQPGTLNPEVFKHLDKSGRSEFLKYLKHQLQDAADTPVYDKNGVFK
QGISNAIYQLLWQTLRFTHKKDIVLHLLLEVVALHADFPSLIVDVVNILD
SETSLITDGLQEERHAFVQLVKDLDRVIPESLLKERLEIDTLQEAGIVKN
KSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQEFDENTTPES
IMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWNLFIPLLRSYMPTGAI
ICEVLGYKFCHFKDSRTPRSLYHVCALLLKHGVIALNDVYVWLTPNDGSI
KADWEEDLADAREMVRKLNLIQTNKKEDEKDPPPPPSVKKFNEEKYNANQ
KFGLCEALLKVGDWENAYKIIQKLPEQAVVLQEPIARAIADLIHLSVENI
YYKKCFKAPAGRRPSRNRLYEDSKLVAKMQAKEFGDLRKYTWPMANVLGP
AMHYDTVLMYKLIRIMRKLVVDMGVDSLNGPPPNSEAEQHYYDIMSSLDA
CILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLI
RRCGLAQRDIKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQI
YDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLTGRLRFKDDGTSLSLWL
QSLASFCGTIYKKYSIELSGLLQYVANQLKSQKSLDLLILREIVHKMAGV
ESCEEMTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNRLKEALANNDLA
VAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLGSTY
SVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKDDP
NAKKLTTTQKLQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFW
SLSMYDLHVPNESYQREVAKLKQLAQQAAEGKDSNQSKNKKEQERYIALM
EKLNDERKKQHEHVDKISQRLQEQKDSWFLLRSGKSAKNDTITQFLQLCL
FPRCTFTALDALYCAKFVHTIHNLKTSNFSTLLCYDRIFCDITYSVTSCT
EGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQFSE
ANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPH
YPVLSKLAQIIERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKE
SVFHQIAERPNKESPTSVGAPAAATRSDKLSPTSPSGNTQGTRAPGGAAP
FYNSEQKSVIKEPDAKAASTTRESKSQRGEGNNVTLVSTATSTASNNERE
SKQRDLPAPRESQSRSKDDQQEQANNGSNGSRQSESRNRDVERDRHDQQD
QRSISSHRSSRDIVRVKERTEAELHQRSRERSQRLEELEAQQRKREKTSR
RGGEERIRHGDGVETVDLVGSTDNRHYEEFEGRMRDLSSVSNESNGSLHH
RQRSHETIEFEKDSKRRKLESSTSSSKKVEELVDSVKKARALKTKERNKD
KLSDEERDARKDRKLGRKRDRVDESNSNEHKRRREGQNGEEELRDRERHR
EKSPRERSHEKFDRERGGASGSRAEERQYISKSARSSRVNY*

LD36155.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15307-PA 1640 GF15307-PA 1..1640 8..1641 7391 86.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24556-PA 1639 GG24556-PA 1..1639 1..1641 8345 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13668-PA 1689 GH13668-PA 3..1689 7..1641 6675 75.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
tho2-PA 1641 CG31671-PA 1..1641 1..1641 8506 100 Plus
tho2-PB 1642 CG31671-PB 1..1642 1..1641 8494 99.9 Plus
tho2-PC 1641 CG31671-PC 1..1641 1..1641 8477 99.9 Plus
CG7971-PG 1062 CG7971-PG 286..673 1216..1638 239 23.5 Plus
CG7971-PA 1062 CG7971-PA 286..673 1216..1638 239 23.5 Plus
CG7971-PC 1107 CG7971-PC 286..673 1216..1638 239 23.5 Plus
CG7971-PF 1655 CG7971-PF 511..898 1216..1638 239 23.5 Plus
CG2839-PA 826 CG2839-PA 285..551 1348..1628 232 24.2 Plus
CG2839-PA 826 CG2839-PA 424..734 1311..1628 230 23.8 Plus
CG2839-PA 826 CG2839-PA 270..568 1322..1628 225 23.1 Plus
CG2839-PA 826 CG2839-PA 458..744 1311..1614 225 22.4 Plus
CG7971-PG 1062 CG7971-PG 272..637 1311..1638 223 26.5 Plus
CG7971-PA 1062 CG7971-PA 272..637 1311..1638 223 26.5 Plus
CG7971-PC 1107 CG7971-PC 272..637 1311..1638 223 26.5 Plus
CG7971-PF 1655 CG7971-PF 497..862 1311..1638 223 26.5 Plus
CG2839-PA 826 CG2839-PA 338..615 1311..1628 219 25.2 Plus
CG2839-PA 826 CG2839-PA 378..662 1348..1628 219 22.2 Plus
CG2839-PA 826 CG2839-PA 419..699 1349..1635 212 22.6 Plus
CG2839-PA 826 CG2839-PA 402..729 1311..1638 206 21.4 Plus
CG2839-PA 826 CG2839-PA 265..534 1362..1628 196 25.7 Plus
rudhira-PE 2075 CG43154-PE 1274..1619 1306..1635 193 20.5 Plus
rudhira-PC 2075 CG43154-PC 1274..1619 1306..1635 193 20.5 Plus
ncm-PA 1330 CG12750-PA 939..1325 1270..1627 176 22.3 Plus
spen-PH 5458 CG18497-PH 1694..1988 1255..1616 174 21.5 Plus
spen-PC 5476 CG18497-PC 1712..2006 1255..1616 174 21.5 Plus
spen-PG 5487 CG18497-PG 1696..1990 1255..1616 174 21.5 Plus
spen-PE 5505 CG18497-PE 1714..2008 1255..1616 174 21.5 Plus
spen-PD 5505 CG18497-PD 1714..2008 1255..1616 174 21.5 Plus
spen-PF 5510 CG18497-PF 1719..2013 1255..1616 174 21.5 Plus
spen-PB 5533 CG18497-PB 1769..2063 1255..1616 174 21.5 Plus
spen-PA 5560 CG18497-PA 1769..2063 1255..1616 174 21.5 Plus
CG7971-PG 1062 CG7971-PG 155..520 1311..1632 173 21.2 Plus
CG7971-PA 1062 CG7971-PA 155..520 1311..1632 173 21.2 Plus
CG7971-PC 1107 CG7971-PC 155..520 1311..1632 173 21.2 Plus
CG7971-PF 1655 CG7971-PF 380..745 1311..1632 173 21.2 Plus
rgn-PD 800 CG6014-PD 428..713 1348..1627 170 22.3 Plus
rgn-PA 800 CG6014-PA 428..713 1348..1627 170 22.3 Plus
rgn-PC 808 CG6014-PC 436..721 1348..1627 170 22.3 Plus
rgn-PB 808 CG6014-PB 436..721 1348..1627 170 22.3 Plus
rudhira-PE 2075 CG43154-PE 1225..1624 1204..1615 169 18.9 Plus
rudhira-PC 2075 CG43154-PC 1225..1624 1204..1615 169 18.9 Plus
ncm-PA 1330 CG12750-PA 920..1281 1288..1638 165 21.6 Plus
CG4119-PB 998 CG4119-PB 122..477 1307..1641 164 23 Plus
CG4119-PA 998 CG4119-PA 122..477 1307..1641 164 23 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21053-PA 1623 GI21053-PA 3..1623 7..1641 6427 75.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19422-PA 1654 GL19422-PA 1..1654 8..1641 7010 81.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16382-PA 1654 GA16382-PA 1..1654 8..1641 7003 81.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23696-PA 148 GM23696-PA 1..142 1..140 554 93.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22873-PA 987 GD22873-PA 1..981 1..979 5248 98.4 Plus
Dsim\GD22874-PA 443 GD22874-PA 1..410 1000..1403 1707 78.5 Plus
Dsim\GD22874-PA 443 GD22874-PA 311..443 1509..1641 621 95.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16134-PA 1680 GJ16134-PA 3..1680 7..1641 6816 78 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14998-PA 1671 GK14998-PA 3..1671 7..1641 6864 79 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15227-PA 1641 GE15227-PA 1..1641 1..1641 8407 96 Plus

LD36155.hyp Sequence

Translation from 144 to 5069

> LD36155.hyp
MQRSTDRLRRLKKLKSVTGAQDGVGGGDAAATADNRTSASSDTNGAAASS
GAGGNQPGTLNPEVFKHLDKSGRSEFLKYLKHQLQDAADTPVYDKNGVFK
QGISNAIYQLLWQTLRFTHKKDIVLHLLLEVVALHADFPSLIVDVVNILD
SETSLITDGLQEERHAFVQLVKDLDRVIPESLLKERLEIDTLQEAGIVKN
KSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQEFDENTTPES
IMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWNLFIPLLRSYMPTGAI
ICEVLGYKFCHFKDSRTPRSLYHVCALLLKHGVIALNDVYVWLTPNDGSI
KADWEEDLADAREMVRKLNLIQTNKKEDEKDPPPPPSVKKFNEEKYNANQ
KFGLCEALLKVGDWENAYKIIQKLPEQAVVLQEPIARAIADLIHLSVENI
YYKKCFKAPAGRRPSRNRLYEDSKLVAKMQAKEFGDLRKYTWPMANVLGP
AMHYDTVLMYKLIRIMRKLVVDMGVDSLNGPPPNSEAEQHYYDIMSSLDA
CILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLI
RRCGLAQRDIKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQI
YDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLTGRLRFKDDGTSLSLWL
QSLASFCGTIYKKYSIELSGLLQYVANQLKSQKSLDLLILREIVHKMAGV
ESCEEMTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNRLKEALANNDLA
VAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLGSTY
SVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKDDP
NAKKLTTTQKLQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFW
SLSMYDLHVPNESYQREVAKLKQLAQQAAEGKDSNQSKNKKEQERYIALM
EKLNDERKKQHEHVDKISQRLQEQKDSWFLLRSGKSAKNDTITQFLQLCL
FPRCTFTALDALYCAKFVHTIHNLKTSNFSTLLCYDRIFCDITYSVTSCT
EGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQFSE
ANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPH
YPVLSKLAQIIERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKE
SVFHQIAERPNKESPTSVGAPAAATRSDKLSPTSPSGNTQGTRAPGGAAP
FYNSEQKSVIKEPDAKAASTTRESKSQRGEGNNVTLVSTATSTASNNERE
SKQRDLPAPRESQSRSKDDQQEQANNGSNGSRQSESRNRDVERDRHDQQD
QRSISSHRSSRDIVRVKERTEAELHQRSRERSQRLEELEAQQRKREKTSR
RGGEERIRHGDGVETVDLVGSTDNRHYEEFEGRMRDLSSVSNESNGSLHH
RQRSHETIEFEKDSKRRKLESSTSSSKKVEELVDSVKKARALKTKERNKD
KLSDEERDARKDRKLGRKRDRVDESNSNEHKRRREGQNGEEELRDRERHR
EKSPRERSHEKFDRERGGASGSRAEERQYISKSARSSRVNY*

LD36155.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
tho2-PA 1641 CG31671-PA 1..1641 1..1641 8506 100 Plus
tho2-PB 1642 CG31671-PB 1..1642 1..1641 8494 99.9 Plus
tho2-PC 1641 CG31671-PC 1..1641 1..1641 8477 99.9 Plus
CG7971-PG 1062 CG7971-PG 286..673 1216..1638 239 23.5 Plus
CG7971-PA 1062 CG7971-PA 286..673 1216..1638 239 23.5 Plus
CG7971-PG 1062 CG7971-PG 272..637 1311..1638 223 26.5 Plus
CG7971-PG 1062 CG7971-PG 155..520 1311..1632 173 21.2 Plus