BDGP Sequence Production Resources |
Search the DGRC for LD36162
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 361 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | Hsp67Bb-RA |
Protein status: | LD36162.pep: gold |
Preliminary Size: | 2213 |
Sequenced Size: | 1920 |
Gene | Date | Evidence |
---|---|---|
CG4456 | 2001-01-01 | Release 2 assignment |
CG4460 | 2001-01-01 | Release 2 assignment |
CG32041 | 2001-09-19 | Blastp of sequenced clone |
CG32041 | 2003-01-01 | Sim4 clustering to Release 3 |
Hsp22 | 2008-04-29 | Release 5.5 accounting |
Hsp67Bb | 2008-08-15 | Release 5.9 accounting |
Hsp22 | 2008-08-15 | Release 5.9 accounting |
Hsp67Bb | 2008-12-18 | 5.12 accounting |
Hsp22 | 2008-12-18 | 5.12 accounting |
1920 bp (1920 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060412.1
> LD36162.complete AGCTGGCGAACCGGTTGAAATTCGTGCTCCGCCCCATAACTACAATGGCC ACGTACGAACAGGTTAAGGATGTGCCCAACCATCCGGATGTGTATCTTAT CGACGTTCGACGGAAGGAAGAGCTCCAGCAGACGGGCTTCATTCCAGCCA GCATCAATATACCCTTGGATGAACTGGACAAGGCTCTAAATCTGGATGGA TCTGCTTTTAAAAACAAGTACGGAAGATCGAAGCCGGAGAAGCAGTCGCC AATCATATTCACCTGCCGGTCGGGAAATCGAGTCTTGGAAGCAGAGAAAA TTGCCAAAAGTCAGGGATACAGCAATGTGGTGATCTACAAAGGCTCCTGG AATGAATGGGCTCAAAAGGAGGGACTTTGACGATAAACGTCGCTATATTT CTGAATAAATGAAGATTAATATTAATTAATTAATTAATTATTAATAGCTA AAAAAAACAGAAAACTTTAATTATTTGTTAATATTAAGCTGTATTTTTCA TATATCTCAAGTTCTTGACTACACCCATGGCAAGCTTATCAATACACACA CGTATACACTCGCACTCAGAAAGCTGTGCACTCCCACAAAACTTTCTCTC TCCCACTCTCTAATGGAGCTCTCTCAATCTGTCTCTCTGCGTATGGAAAC TGACCTTCCCCAAGGCGCAACAGCGAGAGAGAACTTCGCTAAATGCTAAA ATAAAAGGTAAATAAAGTAATATTTGGACACCCAGAGAGCCCCAGAAACT TCCACGGAGTTCGCTAAAGAACAGTGAACAACCCCTAACTAAATGCCATT GCCCGATTTCAGGCAAAGTGGAAAATTGCATCAGCAAAGGGCGAAGAAAA TTCGAGAGAGTGCCGGTATTTTCTAGATTATATGGATTTCCTCTCTGCCA AGAGTATAAATAGCCACCGGTTGGACACTGCGCTCTCAGTTCAAAAAAAC CAAACCAACTGCTAACAACTCGAAGAAAGTCAACTAAATTAAAATTTCGC CAGCTAAATAGAAATTTCATAGGATTGAAACTTCAGACAACAAGATTATC TTCGAAACATAGAGGAAAAATTTAAAAAAAAAGCCAAGAAGTATTTCAAA GACAACAATTGGACGGAATTTCATCAAATTATTCGAATTTGCATAAGAAG CTTTTGTTGGAAAAACCAAGTTACCTTATTAACTACAATGCGTTCCTTAC CGATGTTTTGGCGCATGGCCGAGGAGATGGCACGGATGCCACGCCTCTCC TCGCCCTTTCACGCCTTCTTCCACGAGCCGCCCGTTTGGAGTGTGGCGCT ACCGAGGAACTGGCAGCAGATTGCCCGCTGGCAGGAGCAGGAGTTCGCTC CGCCGGCCACCGTCAACAAGGATGGCTACAAACTCACCCTGGACGTCAAG GACTACAGCGAGCTAAAGGTCAAGGTGCTGGACGAGAGCGTTGTCCTGGT GGAGGGAAAATCAGAGCAGCAGGAGGCCGAACAAGGTGGCTATAGCTCCA GGCACTTCCTCCGCCGCTTCGTCCTGCCGGAAGGATACGAGGCGGACAAG GTGACCTCAACGCTGAGCAGCGACGGCGTCCTGACCATCAGTGTGCCCAA TCCTCCAGGCGTGCAGGAGACACTCAAGGAGCGTGAGGTGACCATCGAGC AGACTGGCGAGCCGGCAAAGAAGTCCGCCGAGGAGCCAAATGACAAAGCC GCCAGTCAGTAGAAATAAGTTAAGATTATACTAAAACCGATAAAATGCTA GTGAACTCCTATGTTTAGATATTCCAAAACCTATCAAATTTAAGTTCTTG TTAAATTAACAAGTTAATTTTAAAACAATTGTGATTCGGTAGCCCGCAAG CCCAATATTTTTATGTAGAAGAAAATAAATATTCGAAAAGACTATATGAT CAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9365288..9366856 | 326..1895 | 7380 | 98.3 | Plus |
chr3L | 24539361 | chr3L | 9364824..9364988 | 1..165 | 795 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 9365056..9365215 | 166..325 | 785 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 8783..8818 | 687..722 | 117 | 80.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9364824..9364988 | 1..165 | 98 | -> | Plus |
chr3L | 9365056..9365215 | 166..325 | 99 | -> | Plus |
chr3L | 9365288..9366860 | 326..1901 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RB | 1..525 | 1188..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RB | 1..525 | 1188..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RA | 1..525 | 1188..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RB | 1..525 | 1188..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RA | 1..525 | 1188..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp67Bb-RB | 1..1900 | 1..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp67Bb-RB | 1..1900 | 1..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp67Bb-RB | 1..1900 | 1..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp67Bb-RB | 1..1900 | 1..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp22-RA | 1..1900 | 1..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9372931..9373095 | 1..165 | 100 | -> | Plus |
3L | 9373162..9373321 | 166..325 | 100 | -> | Plus |
3L | 9373390..9374964 | 326..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9372931..9373095 | 1..165 | 100 | -> | Plus |
3L | 9373162..9373321 | 166..325 | 100 | -> | Plus |
3L | 9373390..9374964 | 326..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9372931..9373095 | 1..165 | 100 | -> | Plus |
3L | 9373162..9373321 | 166..325 | 100 | -> | Plus |
3L | 9373390..9374964 | 326..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9366031..9366195 | 1..165 | 100 | -> | Plus |
arm_3L | 9366262..9366421 | 166..325 | 100 | -> | Plus |
arm_3L | 9366490..9368064 | 326..1901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9366490..9368064 | 326..1901 | 99 | Plus | |
3L | 9366031..9366195 | 1..165 | 100 | -> | Plus |
3L | 9366262..9366421 | 166..325 | 100 | -> | Plus |
Translation from 44 to 379
> LD36162.pep MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKALNL DGSAFKNKYGRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKG SWNEWAQKEGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10688-PA | 139 | GF10688-PA | 29..139 | 1..111 | 481 | 76.6 | Plus |
Dana\GF20128-PA | 139 | GF20128-PA | 29..139 | 1..111 | 374 | 59.5 | Plus |
Dana\GF17119-PA | 113 | GF17119-PA | 1..110 | 1..110 | 302 | 50 | Plus |
Dana\GF17037-PA | 156 | GF17037-PA | 44..154 | 1..111 | 273 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15366-PA | 111 | GG15366-PA | 1..111 | 1..111 | 568 | 96.4 | Plus |
Dere\GG19214-PA | 110 | GG19214-PA | 1..110 | 1..110 | 311 | 52.7 | Plus |
Dere\GG11250-PA | 155 | GG11250-PA | 43..153 | 1..111 | 267 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14585-PA | 113 | GH14585-PA | 1..111 | 1..111 | 394 | 64.9 | Plus |
Dgri\GH25246-PA | 111 | GH25246-PA | 1..110 | 1..110 | 321 | 54.5 | Plus |
Dgri\GH18596-PA | 111 | GH18596-PA | 1..110 | 1..110 | 321 | 54.5 | Plus |
Dgri\GH18488-PA | 125 | GH18488-PA | 13..123 | 1..111 | 246 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4456-PD | 111 | CG4456-PD | 1..111 | 1..111 | 581 | 100 | Plus |
CG4456-PC | 111 | CG4456-PC | 1..111 | 1..111 | 581 | 100 | Plus |
CG4456-PB | 111 | CG4456-PB | 1..111 | 1..111 | 581 | 100 | Plus |
CG4456-PA | 111 | CG4456-PA | 1..111 | 1..111 | 581 | 100 | Plus |
CG12279-PA | 110 | CG12279-PA | 1..109 | 1..109 | 326 | 53.2 | Plus |
CG6000-PC | 154 | CG6000-PC | 45..152 | 4..111 | 280 | 50 | Plus |
CG6000-PD | 154 | CG6000-PD | 45..152 | 4..111 | 280 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12243-PA | 114 | GI12243-PA | 3..112 | 2..111 | 391 | 63.6 | Plus |
Dmoj\GI10805-PA | 111 | GI10805-PA | 1..110 | 1..110 | 304 | 53.6 | Plus |
Dmoj\GI24633-PA | 172 | GI24633-PA | 63..170 | 4..111 | 265 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22440-PA | 111 | GL22440-PA | 1..111 | 1..111 | 470 | 78.4 | Plus |
Dper\GL24425-PA | 112 | GL24425-PA | 1..110 | 1..110 | 356 | 57.3 | Plus |
Dper\GL23397-PA | 159 | GL23397-PA | 47..157 | 1..111 | 254 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24291-PA | 111 | GA24291-PA | 1..111 | 1..111 | 466 | 77.5 | Plus |
Dpse\GA11529-PA | 112 | GA11529-PA | 1..110 | 1..110 | 356 | 57.3 | Plus |
Dpse\GA27244-PA | 159 | GA27244-PA | 47..157 | 1..111 | 255 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25139-PA | 111 | GM25139-PA | 1..111 | 1..111 | 569 | 97.3 | Plus |
Dsec\GM24062-PA | 110 | GM24062-PA | 1..110 | 1..110 | 310 | 52.7 | Plus |
Dsec\GM26554-PA | 153 | GM26554-PA | 41..151 | 1..111 | 266 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14173-PA | 111 | GD14173-PA | 1..111 | 1..111 | 569 | 97.3 | Plus |
Dsim\GD18858-PA | 110 | GD18858-PA | 1..110 | 1..110 | 311 | 52.7 | Plus |
Dsim\GD21060-PA | 153 | GD21060-PA | 41..151 | 1..111 | 266 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11475-PA | 183 | GJ11475-PA | 72..181 | 2..111 | 370 | 60.9 | Plus |
Dvir\GJ14403-PA | 111 | GJ14403-PA | 1..110 | 1..110 | 305 | 52.7 | Plus |
Dvir\GJ14195-PA | 171 | GJ14195-PA | 62..169 | 4..111 | 254 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17634-PA | 112 | GK17634-PA | 1..111 | 1..111 | 395 | 64 | Plus |
Dwil\GK11151-PA | 155 | GK11151-PA | 46..153 | 4..111 | 290 | 50 | Plus |
Dwil\GK13732-PA | 111 | GK13732-PA | 1..110 | 1..110 | 287 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Hsp67Bb-PA | 111 | GE20829-PA | 1..111 | 1..111 | 551 | 92.8 | Plus |
Dyak\GE26219-PA | 110 | GE26219-PA | 1..110 | 1..110 | 316 | 53.6 | Plus |
Dyak\GE23442-PA | 155 | GE23442-PA | 46..153 | 4..111 | 264 | 50 | Plus |
Translation from 1187 to 1711
> LD36162.hyp MRSLPMFWRMAEEMARMPRLSSPFHAFFHEPPVWSVALPRNWQQIARWQE QEFAPPATVNKDGYKLTLDVKDYSELKVKVLDESVVLVEGKSEQQEAEQG GYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKERE VTIEQTGEPAKKSAEEPNDKAASQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hsp22-PB | 174 | CG4460-PB | 1..174 | 1..174 | 906 | 100 | Plus |
Hsp22-PA | 174 | CG4460-PA | 1..174 | 1..174 | 906 | 100 | Plus |
Hsp23-PB | 186 | CG4463-PB | 1..180 | 1..174 | 287 | 39.7 | Plus |
Hsp23-PA | 186 | CG4463-PA | 1..180 | 1..174 | 287 | 39.7 | Plus |
Hsp26-PB | 208 | CG4183-PB | 68..182 | 43..157 | 251 | 44.4 | Plus |