BDGP Sequence Production Resources |
Search the DGRC for LD36183
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 361 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | Pgm-RA |
Protein status: | LD36183.pep: gold |
Preliminary Size: | 1813 |
Sequenced Size: | 1854 |
Gene | Date | Evidence |
---|---|---|
CG5165 | 2001-01-01 | Release 2 assignment |
CG5165 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5165 | 2003-02-24 | Blastp of sequenced clone |
Pgm | 2008-04-29 | Release 5.5 accounting |
Pgm | 2008-08-15 | Release 5.9 accounting |
Pgm | 2008-12-18 | 5.12 accounting |
1854 bp (1854 high quality bases) assembled on 2003-02-24
GenBank Submission: BT010043
> LD36183.complete CAGCCGGAAAACTCCAGTGACATGTCGCTAACGGTGGAAATTGTTGCCAC AAAGCCCTATGAGGGTCAGAAGCCAGGAACCAGTGGATTGCGCAAAAAGG TTAAGGTTTTCACCCAGCCCAACTACACGGAGAACTTTGTCCAGGCCATC TTGGAGGCAAATGGAGCTGCTCTGGCTGGTTCCACCCTTGTAGTTGGTGG AGATGGACGTTTCTACTGCAAGGAGGCTGCCGAGCTAATTGTGCGGCTAT CCGCTGCCAATGGCGTCTCCAAGTTGCTGGTGGGTCAAAACGGCATCCTG TCCACCCCTGCCGTATCCAGCCTGATCCGTCACAACAAGGCTTTGGGCGG CATTGTTTTGACTGCATCCCACAATCCCGGTGGTCCAGAGAATGATTTCG GCATCAAGTTCAACTGCGAGAACGGAGGACCTGCCCCGGATGCGTTCACC AACCACATCTACAAGATCACCACCGAGATCAAGGAGTACAAGCTGGTGCG CAACCTGCAGATCGACATCTCAAAGGTTGGTGTAACCTCGTTCGACATCG CCGGAAAGCCCTTTACCGTGGAGGTGATCGATTCGGTGGCCAACTATGTG CGCCACATGGAGGAAATCTTCGACTTCGCCAAGCTGAAGGACTTCGTAAG TGGCAAAGCCACTGGAAAGCCTCTGAAGATGCGCATCGATGCAATGAACG GAGTAACTGGCTCATATGTGCGCGAGATCTTCCTGAACCGGTTGGGTGCC ACCGAATCATCGGTGGTCCACACCACTCCACTGCCCGACTTTGGTGGTCT GCATCCTGACCCAAATCTCACATACGCCAAGGACCTGGTTGACACTGTCG CCCAGGGAGACTATGACATTGGAGCTGCCTTCGATGGAGATGGTGACCGC AACATGATCATTGGCAGCAAGGCGTTCTTCGTAACTCCCAGCGACTCGCT GGCGGTAATTGCCCACTACCTGGAGGCCATACCGTACTTCCAAAAGAATG GTGTTCAAGGATTCGCCCGCAGTATGCCAACTGCATCCGCTGTGGATTTG GTGGGCAGAAAGTTGGGCAAGGAAGTGTTTGAGGTTCCCACTGGATGGAA GTACTTCGGTAATCTCATGGACGCCGGAAGGTTGTGTCTGTGCGGAGAGG AGAGCTTCGGAACTGGCTCCAATCACATCCGCGAAAAGGATGGCATCTGG GCGGTTCTCGCTTGGATCTCCGTGATGCAGCACACGGGTAAAGGCATCGA AGACATCCTGAAGCAGCACTGGTCTGTGTATGGACGCAACTATTTCACCC GCTACGATTATGAGGAGTGCGCTTCCGATCCTTGCAACGAGATGGTGGCC ACCATGGAGAAGACCATAACTGCTCCGGAGTTCGTCGGCAAGAGCTATTC CAGCGGCGGAAAAACCTACAAGGTCAAGGAGGCCGACAACTTCAGCTACA CAGATCCTGTCGACAAGTCGGTGGCCACGAAACAGGGTCTGCGCATTGTG TTCGAGGATGGCAGCCGCATTGTGGTGCGCCTCAGTGGAACTGGAAGCTC GGGAGCAACCGTTCGCTTGTACATTGATTCCTATGAGAAGGAGAATGTTT TGGGCCAGGCCAGCGTGATGCTGAAACCCTTGATCGACATCGCCCTGGAG ATCTCTCAGCTGCCCAAGTTCACTGGACGCAACGCTCCAACGGTTATCAC GTAAAGAGTTCCTGTCAGCGAAGGAACACTGAGATTACCAACCCATCCAA CTACAATCTCCTCTTGTACCTCAGCGAGGCATTTCCTTGTTATGTTTCGG ATTTATTAAAGTTTGTGTAGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16116107..16117326 | 1565..346 | 6100 | 100 | Minus |
chr3L | 24539361 | chr3L | 16115783..16116041 | 1823..1565 | 1295 | 100 | Minus |
chr3L | 24539361 | chr3L | 16117859..16118108 | 347..98 | 1250 | 100 | Minus |
chr3L | 24539361 | chr3L | 16118176..16118276 | 101..1 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16126342..16127561 | 1565..346 | 6100 | 100 | Minus |
3L | 28110227 | 3L | 16126015..16126276 | 1826..1565 | 1310 | 100 | Minus |
3L | 28110227 | 3L | 16128094..16128343 | 347..98 | 1250 | 100 | Minus |
3L | 28110227 | 3L | 16128411..16128511 | 101..1 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16119442..16120661 | 1565..346 | 6100 | 100 | Minus |
3L | 28103327 | 3L | 16119115..16119376 | 1826..1565 | 1310 | 100 | Minus |
3L | 28103327 | 3L | 16121194..16121443 | 347..98 | 1250 | 100 | Minus |
3L | 28103327 | 3L | 16121511..16121611 | 101..1 | 505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16115783..16116040 | 1566..1823 | 100 | <- | Minus |
chr3L | 16116107..16117325 | 347..1565 | 100 | <- | Minus |
chr3L | 16117860..16118106 | 100..346 | 100 | <- | Minus |
chr3L | 16118178..16118276 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 1..1683 | 22..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 1..1683 | 22..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 1..1683 | 22..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 1..1683 | 22..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 1..1683 | 22..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 86..1871 | 1..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 86..1871 | 1..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 21..1843 | 1..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 86..1871 | 1..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgm-RA | 21..1843 | 1..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16126018..16126275 | 1566..1823 | 100 | <- | Minus |
3L | 16126342..16127560 | 347..1565 | 100 | <- | Minus |
3L | 16128095..16128341 | 100..346 | 100 | <- | Minus |
3L | 16128413..16128511 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16126018..16126275 | 1566..1823 | 100 | <- | Minus |
3L | 16126342..16127560 | 347..1565 | 100 | <- | Minus |
3L | 16128095..16128341 | 100..346 | 100 | <- | Minus |
3L | 16128413..16128511 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16126018..16126275 | 1566..1823 | 100 | <- | Minus |
3L | 16126342..16127560 | 347..1565 | 100 | <- | Minus |
3L | 16128095..16128341 | 100..346 | 100 | <- | Minus |
3L | 16128413..16128511 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16119118..16119375 | 1566..1823 | 100 | <- | Minus |
arm_3L | 16119442..16120660 | 347..1565 | 100 | <- | Minus |
arm_3L | 16121195..16121441 | 100..346 | 100 | <- | Minus |
arm_3L | 16121513..16121611 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16119118..16119375 | 1566..1823 | 100 | <- | Minus |
3L | 16119442..16120660 | 347..1565 | 100 | <- | Minus |
3L | 16121195..16121441 | 100..346 | 100 | <- | Minus |
3L | 16121513..16121611 | 1..99 | 100 | Minus |
Translation from 0 to 1703
> LD36183.hyp QPENSSDMSLTVEIVATKPYEGQKPGTSGLRKKVKVFTQPNYTENFVQAI LEANGAALAGSTLVVGGDGRFYCKEAAELIVRLSAANGVSKLLVGQNGIL STPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNCENGGPAPDAFT NHIYKITTEIKEYKLVRNLQIDISKVGVTSFDIAGKPFTVEVIDSVANYV RHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSYVREIFLNRLGA TESSVVHTTPLPDFGGLHPDPNLTYAKDLVDTVAQGDYDIGAAFDGDGDR NMIIGSKAFFVTPSDSLAVIAHYLEAIPYFQKNGVQGFARSMPTASAVDL VGRKLGKEVFEVPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDGIW AVLAWISVMQHTGKGIEDILKQHWSVYGRNYFTRYDYEECASDPCNEMVA TMEKTITAPEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIV FEDGSRIVVRLSGTGSSGATVRLYIDSYEKENVLGQASVMLKPLIDIALE ISQLPKFTGRNAPTVIT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pgm-PA | 560 | CG5165-PA | 1..560 | 8..567 | 2901 | 100 | Plus |
Translation from 21 to 1703
> LD36183.pep MSLTVEIVATKPYEGQKPGTSGLRKKVKVFTQPNYTENFVQAILEANGAA LAGSTLVVGGDGRFYCKEAAELIVRLSAANGVSKLLVGQNGILSTPAVSS LIRHNKALGGIVLTASHNPGGPENDFGIKFNCENGGPAPDAFTNHIYKIT TEIKEYKLVRNLQIDISKVGVTSFDIAGKPFTVEVIDSVANYVRHMEEIF DFAKLKDFVSGKATGKPLKMRIDAMNGVTGSYVREIFLNRLGATESSVVH TTPLPDFGGLHPDPNLTYAKDLVDTVAQGDYDIGAAFDGDGDRNMIIGSK AFFVTPSDSLAVIAHYLEAIPYFQKNGVQGFARSMPTASAVDLVGRKLGK EVFEVPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDGIWAVLAWIS VMQHTGKGIEDILKQHWSVYGRNYFTRYDYEECASDPCNEMVATMEKTIT APEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRI VVRLSGTGSSGATVRLYIDSYEKENVLGQASVMLKPLIDIALEISQLPKF TGRNAPTVIT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10321-PA | 560 | GF10321-PA | 1..560 | 1..560 | 2858 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13495-PA | 560 | GG13495-PA | 1..560 | 1..560 | 2963 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15036-PA | 562 | GH15036-PA | 7..562 | 5..560 | 2736 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pgm1-PA | 560 | CG5165-PA | 1..560 | 1..560 | 2901 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16688-PA | 560 | GI16688-PA | 1..560 | 1..560 | 2749 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18035-PA | 560 | GL18035-PA | 1..560 | 1..560 | 2790 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18703-PA | 560 | GA18703-PA | 1..560 | 1..560 | 2794 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24444-PA | 492 | GM24444-PA | 1..325 | 1..325 | 1706 | 99.1 | Plus |
Dsec\GM24444-PA | 492 | GM24444-PA | 327..492 | 398..560 | 833 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12940-PA | 560 | GJ12940-PA | 1..560 | 1..560 | 2768 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17336-PA | 560 | GK17336-PA | 1..560 | 1..560 | 2825 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Pgm-PA | 560 | GE22586-PA | 1..560 | 1..560 | 2947 | 98.6 | Plus |