BDGP Sequence Production Resources |
Search the DGRC for LD36256
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 362 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | Taf12-RA |
Protein status: | LD36256.pep: gold |
Preliminary Size: | 1211 |
Sequenced Size: | 1066 |
Gene | Date | Evidence |
---|---|---|
CG17358 | 2001-01-01 | Release 2 assignment |
CG17358 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17358 | 2003-08-11 | Blastp of sequenced clone |
Taf12 | 2008-04-29 | Release 5.5 accounting |
Taf12 | 2008-08-15 | Release 5.9 accounting |
Taf12 | 2008-12-18 | 5.12 accounting |
1066 bp (1066 high quality bases) assembled on 2003-08-11
GenBank Submission: AY061435
> LD36256.complete CCATACTGTTGATTTGGCTGTAGTTGCTCCGCTTATTTTTATTTTGTTTA GTAATTTAGGAAAGTAATAGTTTAAGATCAAAGTGTTAAAACCGCAATAA TTTTGAGAAAGCAGGAGGACACACAACATAAGCAGCAACAACAACAAGTA CACTAACGCTTTTGGCTTTGGTTCTGCACTCTTACCCACTCCCCAAAAAT CCGCCCAACTTACTGTACTTTCCCCAAACACTTCCAACCAACCGACCTAC CACCCACTTGATTTGACTCTGAAGAAACCCAAAAGCAATGTCGGATCTCT TTACCACTTTCGATAGCAACGGCGTCGCCGAGCACCACCTGCACCACAAC CACAACTCCACATCGTCCGCCAGCGGACTGCTCCACGACCCACCCATGGC CTCGCCCTCCCAGCACAGTCCGATGACCAACAACAGCAACTCATCCTCGC AGAACGGCGGACCGGTTTCCGGTTTGGGTACGGGAACGGGCCCCATATCT GGTGGTAGCAAGTCATCCAATCACACATCATCCGCCGCCGGTTCCGAGAA CACTCCCATGCTTACCAAACCGCGTCTCACAGAGCTCGTCCGAGAGGTGG ATACCACCACGCAGCTGGACGAGGATGTTGAGGAGCTTCTGCTTCAGATC ATCGACGACTTTGTCGAGGACACCGTCAAGTCGACGAGCGCCTTCGCCAA GCACCGAAAGTCTAACAAGATCGAGGTGCGCGACGTGCAGCTGCACTTTG AGCGGAAGTACAACATGTGGATACCCGGCTTCGGTACGGACGAACTGCGT CCCTACAAGCGGGCAGCTGTCACGGAGGCGCACAAACAGCGCCTTGCCCT CATACGGAAAACGATCAAGAAATACTAGAGGATTGGATCTAATCGGGTCG AGGCTCTGTTTCGGTTTGCCGGATTTCGCGTATGCTAAACGTGCACACGC CACAAACTAATTTAAGCTCCAATTTAGATTAAATAACAAATTATCGTCGC TCTATTGTAGATTTATTGTAATAAAAGTGCACTATTGATTTCACAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf12-RB | 1080 | Taf12-RB | 28..1072 | 1..1045 | 5225 | 100 | Plus |
Taf12-RA | 1248 | Taf12-RA | 298..1240 | 103..1045 | 4715 | 100 | Plus |
Taf12-RD | 875 | Taf12-RD | 139..867 | 317..1045 | 3645 | 100 | Plus |
Taf12-RA | 1248 | Taf12-RA | 28..129 | 1..102 | 510 | 100 | Plus |
Taf12-RD | 875 | Taf12-RD | 37..138 | 1..102 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7503919..7504405 | 1044..558 | 2435 | 100 | Minus |
chr3R | 27901430 | chr3R | 7504477..7504931 | 557..103 | 2275 | 100 | Minus |
chr3R | 27901430 | chr3R | 7505100..7505201 | 102..1 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11678385..11678872 | 1045..558 | 2440 | 100 | Minus |
3R | 32079331 | 3R | 11678944..11679398 | 557..103 | 2275 | 100 | Minus |
3R | 32079331 | 3R | 11679567..11679668 | 102..1 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11419216..11419703 | 1045..558 | 2440 | 100 | Minus |
3R | 31820162 | 3R | 11419775..11420229 | 557..103 | 2275 | 100 | Minus |
3R | 31820162 | 3R | 11420398..11420499 | 102..1 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5651..5686 | 123..158 | 126 | 83.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7503919..7504405 | 558..1044 | 100 | <- | Minus |
chr3R | 7504477..7504931 | 103..557 | 100 | <- | Minus |
chr3R | 7505100..7505201 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RA | 1..591 | 288..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RA | 1..591 | 288..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 1..591 | 288..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RA | 1..591 | 288..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 1..591 | 288..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 19..1062 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 19..1062 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 23..1066 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 19..1062 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf12-RB | 23..1066 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11678386..11678872 | 558..1044 | 100 | <- | Minus |
3R | 11678944..11679398 | 103..557 | 100 | <- | Minus |
3R | 11679567..11679668 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11678386..11678872 | 558..1044 | 100 | <- | Minus |
3R | 11678944..11679398 | 103..557 | 100 | <- | Minus |
3R | 11679567..11679668 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11678386..11678872 | 558..1044 | 100 | <- | Minus |
3R | 11678944..11679398 | 103..557 | 100 | <- | Minus |
3R | 11679567..11679668 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7504108..7504594 | 558..1044 | 100 | <- | Minus |
arm_3R | 7504666..7505120 | 103..557 | 100 | <- | Minus |
arm_3R | 7505289..7505390 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11419217..11419703 | 558..1044 | 100 | <- | Minus |
3R | 11419775..11420229 | 103..557 | 100 | <- | Minus |
3R | 11420398..11420499 | 1..102 | 100 | Minus |
Translation from 287 to 877
> LD36256.pep MSDLFTTFDSNGVAEHHLHHNHNSTSSASGLLHDPPMASPSQHSPMTNNS NSSSQNGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTEL VREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDV QLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16626-PA | 190 | GF16626-PA | 1..190 | 1..196 | 751 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17205-PA | 198 | GG17205-PA | 1..198 | 1..196 | 1000 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19321-PA | 191 | GH19321-PA | 1..191 | 1..196 | 637 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf12-PA | 196 | CG17358-PA | 1..196 | 1..196 | 1018 | 100 | Plus |
Taf12-PB | 196 | CG17358-PB | 1..196 | 1..196 | 1018 | 100 | Plus |
Taf12-PE | 160 | CG17358-PE | 1..160 | 37..196 | 819 | 100 | Plus |
Taf12-PD | 160 | CG17358-PD | 1..160 | 37..196 | 819 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23544-PA | 193 | GI23544-PA | 1..193 | 1..196 | 681 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12259-PA | 187 | GL12259-PA | 1..187 | 1..196 | 693 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14477-PA | 187 | GA14477-PA | 1..187 | 1..196 | 693 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26083-PA | 194 | GM26083-PA | 1..194 | 1..196 | 987 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20646-PA | 194 | GD20646-PA | 1..194 | 1..196 | 997 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10291-PA | 194 | GJ10291-PA | 1..194 | 1..196 | 675 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11997-PA | 185 | GK11997-PA | 1..185 | 1..196 | 718 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10098-PA | 198 | GE10098-PA | 1..198 | 1..196 | 991 | 96.5 | Plus |
Translation from 287 to 877
> LD36256.hyp MSDLFTTFDSNGVAEHHLHHNHNSTSSASGLLHDPPMASPSQHSPMTNNS NSSSQNGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTEL VREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDV QLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf12-PA | 196 | CG17358-PA | 1..196 | 1..196 | 1018 | 100 | Plus |
Taf12-PB | 196 | CG17358-PB | 1..196 | 1..196 | 1018 | 100 | Plus |
Taf12-PE | 160 | CG17358-PE | 1..160 | 37..196 | 819 | 100 | Plus |
Taf12-PD | 160 | CG17358-PD | 1..160 | 37..196 | 819 | 100 | Plus |