BDGP Sequence Production Resources |
Search the DGRC for LD36265
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 362 |
Well: | 65 |
Vector: | pOT2 |
Associated Gene/Transcript | UGP-RD |
Protein status: | LD36265.pep: gold |
Preliminary Size: | 1983 |
Sequenced Size: | 2026 |
Gene | Date | Evidence |
---|---|---|
UGP-RC | 2010-11-11 | Gleaning Pick By Joe Carlson |
2026 bp assembled on 2011-01-03
GenBank Submission: BT125863.1
> LD36265.complete AGAAGCGGATAATAATCTTGAGAGAATCAATTTAATTTTACACTAAAAGT TGCGGGTGTAAAAAAGTTTCAGTGTGGTTTCTCATTCTCTTTGCTTTCAA TTTGTGTGTGTGTGTGCAGCAAAACAACTAAATTAGTGACGCTTAATTGC TAAATTACTCAAGTGTTAAATTTACTTTACTTCAAAATGCTGGATGTTCC ACATGAAGCTAAGGTGCGCGGCCACCAGCGTGCACCGTCCGACTCCAAGG AGTTCCATGAGGTGACCAAACGGGATGCACTTCGTCTGCTGGAGCACGAT GTGGACCGTCTGCTGGAGACCACTGAGAAGGCCCGCCAGCCTGCCCTCAA GGCAGAAATGGGTCGTTTCGCCGATCTGTTCGGACGTTTCATTCAGGAAG AGGGTCCCGCATTGGACTGGAACAAGATTCAGAAGCTGCCTGAGAATGCT GTGATGAACTACTCGAATCTTAAGTCGCCCAAGAACGAGCAGATCCGCAA CATGTTGGATAAATTGGTGGTCATCAAGCTGAACGGTGGTTTGGGCACCT CAATGGGTTGCCATGGTCCCAAGAGTGTGATTCCTGTGCGTTCGGATCTT ACTTTCCTGGATCTGACCGTGCAGCAAATCGAGCATCTCAACAAGACCTA CGATGCCAATGTTCCGCTGGTACTGATGAACTCCTTTAACACCGACGAGG ATACCGAGAAGATCGTGCGCAAGTACAAAGGATTCCGTGTGCAGATCCAC ACCTTCAACCAGAGCTGCTTCCCGCGCATTAGTCGCGAGCACTACCTGCC GGTGGCCAAAGACTTTGATGTCGAAAAGGATATGGAAGCCTGGTATCCAC CTGGACACGGTGACTTCTACGATACCTTCCGCAACTCTGGCCTGCTGAAG AAGTTCATCGAGGAGGGCCGCGAGTATTGTTTCTTGTCCAACATCGATAA CCTGGGCGCCACCGTCGATCTGAACATCCTCAATAAGCTGGTGGGCGAGG AGCGGGCCACTACTCCAGTGGAGTTTGTCATGGAGGTCACCGACAAGACC CGTGCTGACGTTAAGGGTGGTACTCTCATTCAAATGGAAAACAAGCTGCG CCTGTTGGAAATTGCTCAAGTGCCACCAGAGCATGTGGATGACTTTAAGT CGGTTAAGACCTTCAAGTTCTTTAACACCAACAACATTTGGGCCAACCTG GCAGCCATTGATCGCGTTTTGCGTGAGCGTACCTTAAACATGGAAATTAT TGTGAACAACAAGACGCTGGAGAACGGAACCCGTGTCATTCAGCTGGAGA CTGCTGTGGGTGCGGCCATGAAGTGCTTTGATGGCGCCATCGGCATCAAT GTGCCGCGTTCCCGTTTCTTGCCCGTGAAGAAATCTTCAGATCTGCTGCT GGTCATGTCAAATTTATATACGCTTAAGAACGGCAGCCTGGTAATGTCGC CACAGCGAATGTTCCCTACCACGCCGCTCGTCAAGCTGGGAGAGAACCAC TTCTCGAAGGTCAAGGAGTTCCTGGGTCGCTTTGCCAACATCCCGGACAT CATTGAGCTGGATCACTTGACCGTGAGCGGAGATGTGACTTTCGGTCGTG GCGTTTCTTTGCGCGGCACTGTGATCATCATTGCTAACCATGGCGATCGT ATCGATATCCCAGCTGGAGCCATTCTGGAGAACAAGATTGTATCTGGCAA TATGCGCATCTTGGACCACTAAATCAAATCCTGTACAATTGGATATCGTC TCACTAACTGTAGTCTAATTGTCTAAGTTTTATGTAGTAGCCATGTTCGC GTTTCAAATTTCCAATAACGAATTTCATTTAGCCAATTGTTGTAAGCACA AAGTGTGTCATCTGTATATATCGTTAAGTAGAAATCAGTCAGGGTTTTTA ATCAAAATCGAATTGCAATATGTTTTCAAAAATGTTAGTTGTAGTCGTTC AAATGAGATATAAAAGATAGCAGCTGTTGAAACTCAATAAAGGCATGTTT ATTTCTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9343846..9344258 | 1615..1203 | 2050 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 9343386..9343779 | 2008..1615 | 1940 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 9344811..9345159 | 839..491 | 1745 | 100 | Minus |
chr3L | 24539361 | chr3L | 9344530..9344756 | 1066..840 | 1135 | 100 | Minus |
chr3L | 24539361 | chr3L | 9350526..9350741 | 216..1 | 1065 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 9345817..9346005 | 400..212 | 915 | 98.9 | Minus |
chr3L | 24539361 | chr3L | 9344334..9344474 | 1204..1064 | 705 | 100 | Minus |
chr3L | 24539361 | chr3L | 9345667..9345760 | 492..399 | 470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9351917..9352329 | 1615..1203 | 2065 | 100 | Minus |
3L | 28110227 | 3L | 9351454..9351850 | 2011..1615 | 1985 | 100 | Minus |
3L | 28110227 | 3L | 9352882..9353230 | 839..491 | 1745 | 100 | Minus |
3L | 28110227 | 3L | 9352601..9352827 | 1066..840 | 1135 | 100 | Minus |
3L | 28110227 | 3L | 9358612..9358827 | 216..1 | 1080 | 100 | Minus |
3L | 28110227 | 3L | 9353888..9354076 | 400..212 | 945 | 100 | Minus |
3L | 28110227 | 3L | 9352405..9352545 | 1204..1064 | 705 | 100 | Minus |
3L | 28110227 | 3L | 9353738..9353831 | 492..399 | 470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9345017..9345429 | 1615..1203 | 2065 | 100 | Minus |
3L | 28103327 | 3L | 9344554..9344950 | 2011..1615 | 1985 | 100 | Minus |
3L | 28103327 | 3L | 9345982..9346330 | 839..491 | 1745 | 100 | Minus |
3L | 28103327 | 3L | 9345701..9345927 | 1066..840 | 1135 | 100 | Minus |
3L | 28103327 | 3L | 9351712..9351927 | 216..1 | 1080 | 100 | Minus |
3L | 28103327 | 3L | 9346988..9347176 | 400..212 | 945 | 100 | Minus |
3L | 28103327 | 3L | 9345505..9345645 | 1204..1064 | 705 | 100 | Minus |
3L | 28103327 | 3L | 9346838..9346931 | 492..399 | 470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Tel | 2485 | Dvir\Tel 2485bp Derived from AF009439 (Rel. 66, Last updated, Version 3). | 1293..1366 | 1846..1776 | 118 | 67.6 | Minus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 50..101 | 1964..1913 | 116 | 69.2 | Minus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 4919..4970 | 1964..1913 | 116 | 69.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9343386..9343779 | 1615..2008 | 99 | <- | Minus |
chr3L | 9343847..9344256 | 1205..1614 | 99 | <- | Minus |
chr3L | 9344334..9344472 | 1066..1204 | 100 | <- | Minus |
chr3L | 9344531..9344756 | 840..1065 | 100 | <- | Minus |
chr3L | 9344811..9345157 | 493..839 | 100 | <- | Minus |
chr3L | 9345667..9345758 | 401..492 | 100 | <- | Minus |
chr3L | 9345817..9346003 | 214..400 | 98 | <- | Minus |
chr3L | 9350529..9350741 | 1..213 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 1..1536 | 187..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 1..1536 | 187..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 1..1536 | 187..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 105..2089 | 1..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 109..2093 | 1..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
UGP-RD | 109..2093 | 1..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9351457..9351850 | 1615..2008 | 100 | <- | Minus |
3L | 9351918..9352327 | 1205..1614 | 100 | <- | Minus |
3L | 9352405..9352543 | 1066..1204 | 100 | <- | Minus |
3L | 9352602..9352827 | 840..1065 | 100 | <- | Minus |
3L | 9352882..9353228 | 493..839 | 100 | <- | Minus |
3L | 9353738..9353829 | 401..492 | 100 | <- | Minus |
3L | 9353888..9354074 | 214..400 | 100 | <- | Minus |
3L | 9358615..9358827 | 1..213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9351457..9351850 | 1615..2008 | 100 | <- | Minus |
3L | 9351918..9352327 | 1205..1614 | 100 | <- | Minus |
3L | 9352405..9352543 | 1066..1204 | 100 | <- | Minus |
3L | 9352602..9352827 | 840..1065 | 100 | <- | Minus |
3L | 9352882..9353228 | 493..839 | 100 | <- | Minus |
3L | 9353738..9353829 | 401..492 | 100 | <- | Minus |
3L | 9353888..9354074 | 214..400 | 100 | <- | Minus |
3L | 9358615..9358827 | 1..213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9351457..9351850 | 1615..2008 | 100 | <- | Minus |
3L | 9351918..9352327 | 1205..1614 | 100 | <- | Minus |
3L | 9352405..9352543 | 1066..1204 | 100 | <- | Minus |
3L | 9352602..9352827 | 840..1065 | 100 | <- | Minus |
3L | 9352882..9353228 | 493..839 | 100 | <- | Minus |
3L | 9353738..9353829 | 401..492 | 100 | <- | Minus |
3L | 9353888..9354074 | 214..400 | 100 | <- | Minus |
3L | 9358615..9358827 | 1..213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9351715..9351927 | 1..213 | 100 | Minus | |
arm_3L | 9344557..9344950 | 1615..2008 | 100 | <- | Minus |
arm_3L | 9345018..9345427 | 1205..1614 | 100 | <- | Minus |
arm_3L | 9345505..9345643 | 1066..1204 | 100 | <- | Minus |
arm_3L | 9345702..9345927 | 840..1065 | 100 | <- | Minus |
arm_3L | 9345982..9346328 | 493..839 | 100 | <- | Minus |
arm_3L | 9346838..9346929 | 401..492 | 100 | <- | Minus |
arm_3L | 9346988..9347174 | 214..400 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9344557..9344950 | 1615..2008 | 100 | <- | Minus |
3L | 9345018..9345427 | 1205..1614 | 100 | <- | Minus |
3L | 9345505..9345643 | 1066..1204 | 100 | <- | Minus |
3L | 9345702..9345927 | 840..1065 | 100 | <- | Minus |
3L | 9345982..9346328 | 493..839 | 100 | <- | Minus |
3L | 9346838..9346929 | 401..492 | 100 | <- | Minus |
3L | 9346988..9347174 | 214..400 | 100 | <- | Minus |
3L | 9351715..9351927 | 1..213 | 100 | Minus |
Translation from 186 to 1721
> LD36265.pep MLDVPHEAKVRGHQRAPSDSKEFHEVTKRDALRLLEHDVDRLLETTEKAR QPALKAEMGRFADLFGRFIQEEGPALDWNKIQKLPENAVMNYSNLKSPKN EQIRNMLDKLVVIKLNGGLGTSMGCHGPKSVIPVRSDLTFLDLTVQQIEH LNKTYDANVPLVLMNSFNTDEDTEKIVRKYKGFRVQIHTFNQSCFPRISR EHYLPVAKDFDVEKDMEAWYPPGHGDFYDTFRNSGLLKKFIEEGREYCFL SNIDNLGATVDLNILNKLVGEERATTPVEFVMEVTDKTRADVKGGTLIQM ENKLRLLEIAQVPPEHVDDFKSVKTFKFFNTNNIWANLAAIDRVLRERTL NMEIIVNNKTLENGTRVIQLETAVGAAMKCFDGAIGINVPRSRFLPVKKS SDLLLVMSNLYTLKNGSLVMSPQRMFPTTPLVKLGENHFSKVKEFLGRFA NIPDIIELDHLTVSGDVTFGRGVSLRGTVIIIANHGDRIDIPAGAILENK IVSGNMRILDH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23744-PA | 529 | GF23744-PA | 1..529 | 1..511 | 2635 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14051-PA | 513 | GG14051-PA | 1..513 | 1..511 | 2694 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16268-PA | 511 | GH16268-PA | 1..511 | 1..511 | 2627 | 96.1 | Plus |
Dgri\GH22478-PA | 493 | GH22478-PA | 13..493 | 6..511 | 2423 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
UGP-PD | 511 | CG4347-PD | 1..511 | 1..511 | 2643 | 100 | Plus |
UGP-PC | 513 | CG4347-PC | 1..513 | 1..511 | 2630 | 99.6 | Plus |
UGP-PE | 518 | CG4347-PE | 15..518 | 8..511 | 2597 | 99.8 | Plus |
UGP-PA | 520 | CG4347-PA | 15..520 | 8..511 | 2584 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13203-PA | 520 | GI13203-PA | 13..520 | 6..511 | 2594 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18418-PA | 513 | GL18418-PA | 1..513 | 1..511 | 2624 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18125-PA | 513 | GA18125-PA | 1..513 | 1..511 | 2624 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24885-PA | 513 | GM24885-PA | 1..513 | 1..511 | 2711 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12937-PA | 531 | GD12937-PA | 1..531 | 1..511 | 2678 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11980-PA | 529 | GJ11980-PA | 1..529 | 1..511 | 2618 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24300-PA | 513 | GK24300-PA | 1..513 | 1..511 | 2614 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21254-PA | 520 | GE21254-PA | 15..520 | 8..511 | 2661 | 99.2 | Plus |
Translation from 186 to 1721
> LD36265.hyp MLDVPHEAKVRGHQRAPSDSKEFHEVTKRDALRLLEHDVDRLLETTEKAR QPALKAEMGRFADLFGRFIQEEGPALDWNKIQKLPENAVMNYSNLKSPKN EQIRNMLDKLVVIKLNGGLGTSMGCHGPKSVIPVRSDLTFLDLTVQQIEH LNKTYDANVPLVLMNSFNTDEDTEKIVRKYKGFRVQIHTFNQSCFPRISR EHYLPVAKDFDVEKDMEAWYPPGHGDFYDTFRNSGLLKKFIEEGREYCFL SNIDNLGATVDLNILNKLVGEERATTPVEFVMEVTDKTRADVKGGTLIQM ENKLRLLEIAQVPPEHVDDFKSVKTFKFFNTNNIWANLAAIDRVLRERTL NMEIIVNNKTLENGTRVIQLETAVGAAMKCFDGAIGINVPRSRFLPVKKS SDLLLVMSNLYTLKNGSLVMSPQRMFPTTPLVKLGENHFSKVKEFLGRFA NIPDIIELDHLTVSGDVTFGRGVSLRGTVIIIANHGDRIDIPAGAILENK IVSGNMRILDH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
UGP-PD | 511 | CG4347-PD | 1..511 | 1..511 | 2643 | 100 | Plus |
UGP-PC | 513 | CG4347-PC | 1..513 | 1..511 | 2630 | 99.6 | Plus |
UGP-PE | 518 | CG4347-PE | 15..518 | 8..511 | 2597 | 99.8 | Plus |
UGP-PA | 520 | CG4347-PA | 15..520 | 8..511 | 2584 | 99.4 | Plus |