Clone LD36304 Report

Search the DGRC for LD36304

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:363
Well:4
Vector:pOT2
Associated Gene/Transcriptbcd-RD
Protein status:LD36304.pep: gold
Preliminary Size:2639
Sequenced Size:2513

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14578 2001-01-01 Release 2 assignment
CG1034 2001-09-19 Blastp of sequenced clone
CG1034 2003-01-01 Sim4 clustering to Release 3
bcd 2008-04-29 Release 5.5 accounting
bcd 2008-08-15 Release 5.9 accounting
bcd 2008-12-18 5.12 accounting

Clone Sequence Records

LD36304.complete Sequence

2513 bp (2513 high quality bases) assembled on 2005-08-22

GenBank Submission: AY058658

> LD36304.complete
AGATGCGAAGCAGTGGATCGCAAAAACGCAAAATGTGGGCGAAATAAGTT
CGCGAGCGTCTCGAAAGTAACCGGTTACTGAAAATACAAGAAAGTTTCCA
CACTCCTTTGCCATTTTTCCGCGCGGCGCTTGGAAATTCGTAAAGATAAC
GCGGCGGAGTGTTTGGGGAAAATGGCGCAACCGCCGCCAGATCAAAACTT
TTACCATCATCCGCTGCCCCACACGCACACACATCCGCATCCGCACTCCC
ATCCGCATCCGCACTCGCATCCGCACCCACATCACCAACATCCGCAGCTT
CAGTTGCCGCCACAATTCCGAAATCCCTTCGATTTGCTTTTCGATGAGCG
AACGGGAGCGATAAACTACAACTACATACGTCCGTATCTGCCCAACCAGA
TGCCCAAGCCAGAGGAGCTGCCCGACTCTCTGGTGATGCGGCGACCACGT
CGCACCCGCACCACTTTTACCAGCTCTCAAATAGCAGAGCTGGAGCAGCA
CTTTCTGCAGGGACGATACCTCACAGCCCCCCGACTTGCGGATCTGTCAG
CGAAACTAGCCCTGGGCACAGCCCAGGTGAAGATATGGTTTAAGAACCGT
CGGCGTCGTCACAAGATCCAATCGGATCAGCACAAGGACCAGTCCTACGA
GGGGATGCCTCTCTCGCCGGGTATGAAACAGAGCGATGGCGATCCCCCCA
GCTTGCAGACTCTTAGCTTGGGTGGAGGAGCCACGCCCAACGCTTTGACT
CCGTCACCCACGCCCTCAACGCCCACTGCACACATGACGGAGCACTACAG
CGAGTCATTCAACGCCTACTACAACTACAATGGAGGCCACAATCACGCCC
AGGCCAATCGTCACATGCACATGCAGTATCCTTCCGGAGGGGGGCCAGGA
CCTGGGTCGACCAATGTCAATGGCGGCCAGTTCTTCCAGCAGCAGCAGGT
CCATAATCACCAGCAGCAACTGCACCACCAGGGCAACCACGTGCCGCACC
AGATGCAGCAGCAGCAACAGCAGGCTCAGCAGCAGCAATACCATCACTTT
GACTTCCAGCAAAAGCAAGCCAGCGCCTGTCGCGTCCTGGTCAAGGACGA
ACCGGAGGCCGACTACAACTTCAACAGCTCGTACTACATGCGATCGGGAA
TGTCTGGCGCCACTGCATCGGCATCCGCTGTGGCCCGAGGCGCTGCCTCG
CCGGGCTCCGAGGTCTACGAGCCATTAACACCCAAGAATGACGAAAGTCC
GAGTCTGTGTGGCATCGGCATCGGCGGACCTTGCGCCATCGCCGTTGGCG
AGACGGAGGCGGCCGACGACATGGACGACGGAACGAGCAAGAAGACGACG
CTACAGATCTTGGAGCCTTTGAAGGGTCTGGACAAGAGCTGCGACGATGG
CAGTAGCGACGACATGAGCACCGGAATAAGAGCCTTAGCAGGAACCGGAA
ATCGTGGAGCGGCATTTGCCAAATTTGGCAAGCCTTCGCCCCCACAAGGC
CCTCAGCCGCCCCTCGGAATGGGGGGCGTGGCCATGGGCGAATCGAACCA
ATATCAATGCACGATGGATACGATAATGCAAGCGTATAATCCCCATCGGA
ACGCCGCGGGCAACTCGCAGTTTGCCTACTGCTTCAATTAGCCTGGATGA
GAGGCGTGTTAGAGAGTTTCATTAGCTTTAGGTTAACCACTGTTGTTCCT
GATTGTACAAATACCAAGTGATTGTAGATATCTACGCGTAGAAAGTTAGG
TCTAGTCCTAAGATCCGTGTAAATGGTTCCCAGGGAAGTTTTATGTACTA
GCCTAGTCAGCAGGCCGCACGGATTCCAGTGCATATCTTAGTGATACTCC
AGTTAACTCTATACTTTCCCTGCAATACGCTATTCGCCTTAGATGTATCT
GGGTGGCTGCTCCACTAAAGCCCGGGAATATGCAACCAGTTACATTTGAG
GCCATTTGGGCTTAAGCGTATTCCATGGAAAGTTATCGTCCCACATTTCG
GAAATTATATTCCGAGCCAGCAAGAAAATCTTCTCTGTTACAATTTGACA
TAGCTAAAAACTGTACTAATCAAAATGAAAAATGTTTCTCTTGGGCGTAA
TCTCATACAATGATTACCCTTAAAGATCGAACATTTAAACAATAATATTT
GATATGATATTTTCAATTTCTATGCTATGCCAAAGTGTCTGACATAATCA
AACATTTGCGCATTCTTTGACCAAGAATAGTCAGCAAATTGTATTTTCAA
TCAATGCAGACCATTTGTTTCAGATTCGGAGATTTTTTGCTGCCAAACGG
AATAACTATCATAGCTCACATTCTATTTACATCACTAAGAAGAGCATTGC
AATCTGTTAGGCCTCAAGTTTAATTTTAAAATGCTGCACCTTTGATGTTG
TCTCTTTAAGCTTTGTATTTTTAATTACGAAAATATATAAGAACTACTCT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAA
AAAAAAAAAAAAA

LD36304.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
bcd-RF 2532 bcd-RF 393..2508 336..2451 10580 100 Plus
bcd-RE 2547 bcd-RE 482..2523 410..2451 10210 100 Plus
bcd-RG 2525 bcd-RG 460..2501 410..2451 10210 100 Plus
bcd-RG 2525 bcd-RG 36..448 1..413 2065 100 Plus
bcd-RE 2547 bcd-RE 36..371 1..336 1680 100 Plus
bcd-RF 2532 bcd-RF 36..371 1..336 1680 100 Plus
bcd-RE 2547 bcd-RE 393..470 336..413 390 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2581646..2582742 2451..1355 5470 99.9 Minus
chr3R 27901430 chr3R 2583253..2584199 1356..410 4735 100 Minus
chr2RHet 3288813 chr2RHet 2909356..2910014 1068..410 3235 99.4 Minus
chr3R 27901430 chr3R 2584887..2585222 336..1 1680 100 Minus
chr2RHet 3288813 chr2RHet 2910705..2910978 333..60 1310 98.5 Minus
chr3R 27901430 chr3R 2584245..2584328 419..336 390 97.6 Minus
chr2RHet 3288813 chr2RHet 2910060..2910143 419..336 390 97.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:31:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6755866..6756962 2451..1355 5485 100 Minus
3R 32079331 3R 6757473..6758419 1356..410 4735 100 Minus
3L 28110227 3L 27540989..27541647 410..1068 3235 99.4 Plus
3L 28110227 3L 27850078..27850736 410..1068 3235 99.4 Plus
3R 32079331 3R 6759107..6759442 336..1 1680 100 Minus
3L 28110227 3L 27540025..27540298 60..333 1310 98.5 Plus
3L 28110227 3L 27849114..27849387 60..333 1310 98.5 Plus
3R 32079331 3R 6758465..6758548 419..336 390 97.6 Minus
3L 28110227 3L 27540860..27540943 336..419 390 97.6 Plus
3L 28110227 3L 27849949..27850032 336..419 390 97.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6496697..6497793 2451..1355 5485 100 Minus
3R 31820162 3R 6498304..6499250 1356..410 4735 100 Minus
3L 28103327 3L 27843178..27843836 410..1068 3235 99.3 Plus
3L 28103327 3L 27534089..27534747 410..1068 3235 99.3 Plus
3R 31820162 3R 6499938..6500273 336..1 1680 100 Minus
3L 28103327 3L 27533125..27533398 60..333 1310 98.5 Plus
3L 28103327 3L 27842214..27842487 60..333 1310 98.5 Plus
3R 31820162 3R 6499296..6499379 419..336 390 97.6 Minus
3L 28103327 3L 27843049..27843132 336..419 390 97.6 Plus
3L 28103327 3L 27533960..27534043 336..419 390 97.6 Plus
Blast to na_te.dros performed 2019-03-15 18:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6812..7013 937..1134 279 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6849 937..1046 233 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6888 937..1046 233 69.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6921 937..1067 227 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6892 937..1068 225 68.8 Plus
roo 9092 roo DM_ROO 9092bp 1040..1200 912..1067 197 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2367..2473 937..1046 183 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2529 937..1128 182 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2409..2533 937..1061 166 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6845..6977 937..1069 160 61.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2840..2947 936..1046 151 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2454..2581 937..1071 146 60.3 Plus
springer 7546 springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. 5584..5633 2471..2422 124 72 Minus
Stalker2 7672 Stalker2 STALKER2 7672bp 6943..7000 2430..2487 119 67.2 Plus
hopper 1435 hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). 138..215 2361..2440 116 62.5 Plus

LD36304.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:29:57 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2581647..2582740 1357..2450 99 <- Minus
chr3R 2583253..2583562 1047..1356 100 == Minus
chr3R 2583673..2584196 413..936 100 <- Minus
chr3R 2584252..2584327 337..412 100 <- Minus
chr3R 2584887..2584935 288..336 100 == Minus
chr3R 2585007..2585222 1..216 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:18:48 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 1..1470 172..1641 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:19 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 1..1470 172..1641 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:06:32 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 1..1470 172..1641 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:35:04 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 1..1470 172..1641 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:28 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 1..1470 172..1641 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:29:52 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RF 36..264 1..229 100 <- Plus
bcd-RF 282..310 230..257 89 == Plus
bcd-RF 311..372 276..336 98 -> Plus
bcd-RF 394..2507 337..2450 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:19 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RF 36..264 1..229 100 <- Plus
bcd-RF 282..310 230..257 89 == Plus
bcd-RF 311..372 276..336 98 -> Plus
bcd-RF 394..2507 337..2450 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:06:32 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 25..2474 1..2450 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:35:04 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RF 36..264 1..229 100 <- Plus
bcd-RF 282..310 230..257 89 == Plus
bcd-RF 311..372 276..336 98 -> Plus
bcd-RF 394..2507 337..2450 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:28 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
bcd-RD 25..2474 1..2450 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:57 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6755867..6756960 1357..2450 100 <- Minus
3R 6757473..6758416 413..1356 100 <- Minus
3R 6758472..6758547 337..412 100 <- Minus
3R 6759107..6759442 1..336 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:57 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6755867..6756960 1357..2450 100 <- Minus
3R 6757473..6758416 413..1356 100 <- Minus
3R 6758472..6758547 337..412 100 <- Minus
3R 6759107..6759442 1..336 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:57 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6755867..6756960 1357..2450 100 <- Minus
3R 6757473..6758416 413..1356 100 <- Minus
3R 6758472..6758547 337..412 100 <- Minus
3R 6759107..6759442 1..336 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:06:32 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2581589..2582682 1357..2450 100 <- Minus
arm_3R 2583195..2584138 413..1356 100 <- Minus
arm_3R 2584194..2584269 337..412 100 <- Minus
arm_3R 2584829..2585164 1..336 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:13:37 Download gff for LD36304.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6496698..6497791 1357..2450 100 <- Minus
3R 6498304..6499247 413..1356 100 <- Minus
3R 6499303..6499378 337..412 100 <- Minus
3R 6499938..6500273 1..336 100   Minus

LD36304.pep Sequence

Translation from 171 to 1640

> LD36304.pep
MAQPPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFR
NPFDLLFDERTGAINYNYIRPYLPNQMPKPEELPDSLVMRRPRRTRTTFT
SSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQ
SDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPST
PTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQYPSGGGPGPGSTNVN
GGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYHHFDFQQKQA
SACRVLVKDEPEADYNFNSSYYMRSGMSGATASASAVARGAASPGSEVYE
PLTPKNDESPSLCGIGIGGPCAIAVGETEAADDMDDGTSKKTTLQILEPL
KGLDKSCDDGSSDDMSTGIRALAGTGNRGAAFAKFGKPSPPQGPQPPLGM
GGVAMGESNQYQCTMDTIMQAYNPHRNAAGNSQFAYCFN*

LD36304.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:18:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17793-PA 523 GF17793-PA 1..523 1..489 1617 78.7 Plus
Dana\GF17798-PA 790 GF17798-PA 197..261 92..156 171 46.2 Plus
Dana\GF23802-PA 532 GF23802-PA 431..506 73..148 166 40.8 Plus
Dana\GF18600-PA 384 GF18600-PA 176..240 89..150 156 44.6 Plus
Dana\GF17487-PA 728 GF17487-PA 375..445 90..160 154 39.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10213-PA 495 GG10213-PA 1..495 1..489 2523 96.4 Plus
Dere\GG10269-PA 811 GG10269-PA 222..286 92..156 171 46.2 Plus
Dere\GG14457-PA 524 GG14457-PA 422..497 73..148 166 40.8 Plus
Dere\GG24598-PA 382 GG24598-PA 172..244 89..161 154 38.4 Plus
Dere\GG21608-PA 429 GG21608-PA 273..384 91..207 153 35 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19480-PA 533 GH19480-PA 1..533 1..489 1249 65.3 Plus
Dgri\GH19484-PA 787 GH19484-PA 168..232 92..156 172 46.2 Plus
Dgri\GH14983-PA 559 GH14983-PA 449..524 73..148 166 40.8 Plus
Dgri\GH18130-PA 314 GH18130-PA 37..118 91..172 158 39 Plus
Dgri\GH13706-PA 752 GH13706-PA 402..472 90..160 158 40.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
bcd-PD 489 CG1034-PD 1..489 1..489 2689 100 Plus
bcd-PG 494 CG1034-PG 1..494 1..489 2673 99 Plus
bcd-PF 413 CG1034-PF 1..413 77..489 2221 100 Plus
bcd-PE 418 CG1034-PE 1..418 77..489 2205 98.8 Plus
bcd-PA 149 CG1034-PA 56..149 396..489 510 100 Plus
bcd-PA 149 CG1034-PA 1..62 1..62 358 90.3 Plus
eyg-PC 670 CG10488-PC 349..601 93..369 207 30.2 Plus
eyg-PB 670 CG10488-PB 349..601 93..369 207 30.2 Plus
eyg-PA 670 CG10488-PA 349..601 93..369 207 30.2 Plus
Vsx1-PB 837 CG4136-PB 318..765 13..408 204 22.7 Plus
Vsx1-PA 837 CG4136-PA 318..765 13..408 204 22.7 Plus
E5-PA 524 CG9930-PA 223..497 14..299 185 26.9 Plus
repo-PA 612 CG31240-PA 303..517 91..288 184 29.8 Plus
ftz-PA 410 CG2047-PA 255..408 93..291 171 29.9 Plus
oc-PE 539 CG12154-PE 13..203 28..250 168 27 Plus
pb-PD 772 CG31481-PD 188..311 92..203 167 34.7 Plus
pb-PC 777 CG31481-PC 193..316 92..203 167 34.7 Plus
pb-PB 777 CG31481-PB 193..316 92..203 167 34.7 Plus
pb-PA 782 CG31481-PA 198..321 92..203 167 34.7 Plus
exex-PA 525 CG8254-PA 357..521 24..175 165 29.3 Plus
lab-PB 213 CG1264-PB 89..204 96..206 164 39 Plus
lab-PA 629 CG1264-PA 505..620 96..206 164 39 Plus
Hmx-PE 592 CG43748-PE 366..526 2..150 160 30.2 Plus
Hmx-PC 592 CG43748-PC 366..526 2..150 160 30.2 Plus
Hmx-PD 718 CG43748-PD 366..526 2..150 160 30.2 Plus
bsh-PC 429 CG10604-PC 273..384 91..207 158 34.2 Plus
bsh-PB 429 CG10604-PB 273..384 91..207 158 34.2 Plus
Dll-PB 322 CG3629-PB 122..251 90..209 157 31.5 Plus
Dll-PA 327 CG3629-PA 122..251 90..209 157 31.5 Plus
Dll-PC 347 CG3629-PC 122..270 90..250 157 29.3 Plus
ro-PB 350 CG6348-PB 103..270 6..171 156 30.1 Plus
ro-PA 350 CG6348-PA 103..270 6..171 156 30.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24718-PA 549 GI24718-PA 1..221 1..215 723 86.4 Plus
Dmoj\GI24721-PA 773 GI24721-PA 176..240 92..156 173 46.2 Plus
Dmoj\GI13145-PA 551 GI13145-PA 443..518 73..148 165 40.8 Plus
Dmoj\GI22889-PA 234 GI22889-PA 31..96 88..153 157 45.5 Plus
Dmoj\GI13996-PA 278 GI13996-PA 19..85 88..154 155 43.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\bcd-PA 426 GL22043-PA 1..426 1..489 1018 59.7 Plus
Dper\GL22046-PA 797 GL22046-PA 190..254 92..156 172 46.2 Plus
Dper\GL18045-PA 593 GL18045-PA 473..545 76..148 159 39.7 Plus
Dper\GL21778-PA 471 GL21778-PA 291..355 93..163 157 43.7 Plus
Dper\GL27337-PA 380 GL27337-PA 178..246 85..150 154 42 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\bcd-PA 536 GA10255-PA 1..536 1..489 1468 68.6 Plus
Dpse\bcd-PC 463 GA10255-PC 1..463 77..489 1300 67.8 Plus
Dpse\bcd-PB 140 GA10255-PB 57..140 400..489 309 71.1 Plus
Dpse\pb-PA 801 GA16277-PA 190..254 92..156 172 46.2 Plus
Dpse\pb-PB 796 GA16277-PB 185..249 92..156 172 46.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\bcd-PA 484 GM10525-PA 1..484 1..489 2520 97.1 Plus
Dsec\GM10530-PA 833 GM10530-PA 245..309 92..156 171 46.2 Plus
Dsec\GM25007-PA 523 GM25007-PA 420..495 73..148 166 40.8 Plus
Dsec\bap-PA 382 GM10423-PA 172..244 89..161 154 38.4 Plus
Dsec\GM15242-PA 280 GM15242-PA 134..194 90..150 152 45.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\bcd-PA 489 GD19520-PA 1..489 1..489 2581 98.6 Plus
Dsim\GD19525-PA 789 GD19525-PA 201..265 92..156 171 46.2 Plus
Dsim\GD14043-PA 321 GD14043-PA 217..292 73..148 163 40.8 Plus
Dsim\bap-PA 382 GD19423-PA 172..244 89..161 153 38.4 Plus
Dsim\GD21734-PA 429 GD21734-PA 273..384 91..207 153 35 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:18:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\bcd-PA 561 GJ23934-PA 1..561 1..489 1234 61.4 Plus
Dvir\GJ23937-PA 780 GJ23937-PA 173..237 92..156 172 46.2 Plus
Dvir\GJ13893-PA 557 GJ13893-PA 450..525 73..148 166 40.8 Plus
Dvir\GJ14677-PA 442 GJ14677-PA 285..366 91..170 156 41 Plus
Dvir\GJ23303-PA 322 GJ23303-PA 43..109 88..154 155 43.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:18:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10828-PA 502 GK10828-PA 1..210 1..241 666 69.8 Plus
Dwil\GK12250-PA 233 GK12250-PA 16..96 73..148 173 44.4 Plus
Dwil\GK10831-PA 816 GK10831-PA 197..261 92..156 172 46.2 Plus
Dwil\GK20585-PA 578 GK20585-PA 470..542 76..148 164 41.1 Plus
Dwil\GK10829-PA 351 GK10829-PA 79..134 93..148 157 50 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25828-PA 490 GE25828-PA 1..490 1..489 2490 95.9 Plus
Dyak\GE25834-PA 784 GE25834-PA 193..257 92..156 171 46.2 Plus
Dyak\GE21647-PA 532 GE21647-PA 431..503 76..148 166 41.1 Plus
Dyak\GE26456-PA 721 GE26456-PA 391..461 90..160 157 40.8 Plus
Dyak\GE25732-PA 390 GE25732-PA 172..244 89..161 153 38.4 Plus

LD36304.hyp Sequence

Translation from 171 to 1640

> LD36304.hyp
MAQPPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFR
NPFDLLFDERTGAINYNYIRPYLPNQMPKPEELPDSLVMRRPRRTRTTFT
SSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQ
SDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPST
PTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQYPSGGGPGPGSTNVN
GGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYHHFDFQQKQA
SACRVLVKDEPEADYNFNSSYYMRSGMSGATASASAVARGAASPGSEVYE
PLTPKNDESPSLCGIGIGGPCAIAVGETEAADDMDDGTSKKTTLQILEPL
KGLDKSCDDGSSDDMSTGIRALAGTGNRGAAFAKFGKPSPPQGPQPPLGM
GGVAMGESNQYQCTMDTIMQAYNPHRNAAGNSQFAYCFN*

LD36304.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
bcd-PD 489 CG1034-PD 1..489 1..489 2689 100 Plus
bcd-PG 494 CG1034-PG 1..494 1..489 2673 99 Plus
bcd-PF 413 CG1034-PF 1..413 77..489 2221 100 Plus
bcd-PE 418 CG1034-PE 1..418 77..489 2205 98.8 Plus
bcd-PA 149 CG1034-PA 56..149 396..489 510 100 Plus