BDGP Sequence Production Resources |
Search the DGRC for LD36337
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 363 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | Tis11-RA |
Protein status: | LD36337.pep: gold |
Sequenced Size: | 2158 |
Gene | Date | Evidence |
---|---|---|
Tis11 | 2008-04-29 | Picked prior to 5.5 |
Tis11 | 2008-08-15 | Release 5.9 accounting |
Tis11 | 2008-12-18 | 5.12 accounting |
2158 bp assembled on 2008-05-22
GenBank Submission: BT032844
> LD36337.complete CGAGTGTAAGGTTCGATTCCGATCTGGCTGGTTGTCTGACGGACGTGCTG CGTCTATTTTGTTGTGTTTTTTTGCGAACGAGCGAAGAGCGACAGGACCT CTGCGCCCGTATTCAAACTGATTTTTTTTTATTGTTGCAATGCAATATTC GCGGAACGAATAACAACAACATACATAACTCAATATTCAAGTGCAAAGCA AATACAAATCAAACACAAAAGAAAAAGCAACGAAATAAAGATATATAGAA AAGAAAAACAAAACGAAAAAATTCGCACATTTTTTCTGTCTTGTCCAGTG GAAAATACAACAAATAAACAACAACGGCTAAATCAAGTTAACAATCTGTT CAAAACCAATCAACAAAATGTCTGCTGATATTCTGCAGAAATCAAGAGAG CAGGATGATTCGCACTACTTCGAGCGTGGCGATATATCCAAATACGTAAC GATGAACGATCACTTGGGTGATTTCGATTGCAACGAGGTGCGCAAGGAAA TAAGGATGCTGCTCGCCCACGGCGCCAACTTGGATCAGCAGCACCAGCAG CAGCCACATCGCCACCATGGCGGTCTCACACGAACCATTTCACAGCCGGC CCAGCTCATCCAGCAGCAGCAGCAGCAACACCAACAGCAGCAGCAGCAGC AGCCAGCTGTTGCCAGTCTGGTGACCATCACCGAGAACCTGGGCAACATG AACCTGCACCGAAAGCTGGAGCGAACCCAATCGGAGCCACTGCCGCCACA GCAGCCGATGAACACATCCAGATACAAGACCGAGCTGTGCCGCCCGTTCG AGGAGGCCGGAGAATGCAAGTACGGCGAGAAGTGCCAGTTCGCCCATGGA AGCCATGAGTTGCGAAACGTGCACCGTCATCCCAAGTACAAGACGGAATA CTGCCGCACCTTCCACAGCGTGGGCTTCTGTCCCTACGGACCGCGCTGTC ACTTTGTTCACAATGCGGACGAGGCCCGCGCCCAACAGGCGGCCCAGGCA GCCAAGTCCTCCACCCAGTCGCAGTCGCAGTCGCAGCAGTCGTCGTCGCA GAACTTCTCGCCGAAGAGCAACCAGAGCAGCAATCAAAGTAGCAACAGTA GCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGTGGCGGCGGCAACAGCATC AACAACAACAACGGTAGCCAATTCTATCTGCCGCTAAGCCCACCGCTGAG CATGAGCACAGGATCGGACCGGGAATCGCCCACCGGATCACTGTCCCTCA GCCCCACCAACTCGTTGACCAGCTTCCCGTTCCACGATGCCCTGCAGCAT GGATATTTGGCATCGAATGGCGCCAAGAGCAACAGTTCCGCCTCGTCCAC ATCATCGGCCTCTGGAATGGGTCTGGGCATGAGCATGGGCATCGGCCAGG GCATGATCATCGGTCAGGGCTTGGGAATGGGACATCATGGACCGGCTACA CCGCCGGAGAGCCCCAATGTGCCCATATCGCCAGTGCATACACCGCCACC GTACGATGTGGTGGTCAGTGGATCTGGAGCGGGCAACAATAGCGTTGGCA GCAAGCAGCTCCTGCAGAAGAGCGTCAGCACACCGATGCAGCAGGAGGAT ACGCCCAGGTTGCCGGTTTTCAACCGTCTCAGCTCCGGTGTGGAGGCCTA CCAGCAGCAGTCCAATTTGGGACTCTAAACGCGTGGCAGTCTGCGAAACA AAATTGAATTGAAACACCATCCAGCATCCAACTCACGCCCATCCAAGCAT CCCTCCATCAACAAACCAGCATCCTTGACAAAATCTCAGTAACGACCAAA CCATGGAAACTGAAAACAAAACTACTCTCGCAGTCCAATTTGAAACGCAA ATATGCCAAGGCAAATGGATTTCCGGTGGCGTAACTTCGTTGCAGAATAA GTGTATATCAAGTATACGCCAAACACAGACACCCCTTAATTATGAACCGA TCCTTGATATCAATTCTCTCATTGCTGTGACAGTCAAACGTAATCGTTAT ACAATAATCGTTATATGAGAAGGACCGAATTACGGACTACTACGGGACAA TTAGTTAGATAGATACGTAAATGACAAACAAACAATCCAAGCAAACGATG ATCTTAAACTATAACTAAATACTAAAAACTAAAAACTAACAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12569243..12570624 | 759..2140 | 6805 | 99.5 | Plus |
chrX | 22417052 | chrX | 12551455..12551788 | 118..451 | 1670 | 100 | Plus |
chrX | 22417052 | chrX | 12568655..12568978 | 451..771 | 1510 | 98.5 | Plus |
chrX | 22417052 | chrX | 12550353..12550469 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12678321..12679720 | 759..2158 | 6940 | 99.7 | Plus |
X | 23542271 | X | 12660534..12660867 | 118..451 | 1670 | 100 | Plus |
X | 23542271 | X | 12677736..12678056 | 451..771 | 1605 | 100 | Plus |
X | 23542271 | X | 12659432..12659548 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12686419..12687818 | 759..2158 | 6940 | 99.7 | Plus |
X | 23527363 | X | 12668632..12668965 | 118..451 | 1670 | 100 | Plus |
X | 23527363 | X | 12685834..12686154 | 451..771 | 1605 | 100 | Plus |
X | 23527363 | X | 12667530..12667646 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2959 | 532..1216 | 277 | 54 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2408 | 1068..1170 | 219 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2430 | 1064..1162 | 216 | 68.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1145 | 1076..1162 | 210 | 71.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2486 | 1034..1170 | 209 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2761..2834 | 1097..1170 | 172 | 70.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2828..2996 | 998..1171 | 155 | 58.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1163 | 537..644 | 154 | 65.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3233..3371 | 1068..1210 | 146 | 60.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12550353..12550469 | 1..117 | 100 | -> | Plus |
chrX | 12551455..12551531 | 118..194 | 100 | == | Plus |
chrX | 12551608..12551788 | 271..451 | 100 | -> | Plus |
chrX | 12568656..12568978 | 452..771 | 86 | -> | Plus |
chrX | 12569256..12569550 | 772..1066 | 99 | == | Plus |
chrX | 12569659..12570605 | 1175..2121 | 99 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 1..1311 | 368..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 1..1311 | 368..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 1..1311 | 368..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 1..1311 | 368..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 1..1311 | 368..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR33963-RA | 1..87 | 31..117 | 100 | -> | Plus |
CR33963-RA | 1073..1171 | 118..216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 71..2194 | 1..2124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 71..2194 | 1..2124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 18..2157 | 1..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 71..2194 | 1..2124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tis11-RA | 18..2157 | 1..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12659432..12659548 | 1..117 | 100 | -> | Plus |
X | 12660534..12660867 | 118..451 | 100 | -> | Plus |
X | 12677737..12678056 | 452..771 | 100 | -> | Plus |
X | 12678334..12679702 | 772..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12659432..12659548 | 1..117 | 100 | -> | Plus |
X | 12660534..12660867 | 118..451 | 100 | -> | Plus |
X | 12677737..12678056 | 452..771 | 100 | -> | Plus |
X | 12678334..12679702 | 772..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12659432..12659548 | 1..117 | 100 | -> | Plus |
X | 12660534..12660867 | 118..451 | 100 | -> | Plus |
X | 12677737..12678056 | 452..771 | 100 | -> | Plus |
X | 12678334..12679702 | 772..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12553465..12553581 | 1..117 | 100 | -> | Plus |
arm_X | 12554567..12554900 | 118..451 | 100 | -> | Plus |
arm_X | 12571770..12572089 | 452..771 | 100 | -> | Plus |
arm_X | 12572367..12573735 | 772..2140 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12668632..12668965 | 118..451 | 100 | -> | Plus |
X | 12685835..12686154 | 452..771 | 100 | -> | Plus |
X | 12686432..12687800 | 772..2140 | 100 | Plus | |
X | 12667530..12667646 | 1..117 | 100 | -> | Plus |
Translation from 367 to 1677
> LD36337.pep MSADILQKSREQDDSHYFERGDISKYVTMNDHLGDFDCNEVRKEIRMLLA HGANLDQQHQQQPHRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVAS LVTITENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGEC KYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNA DEARAQQAAQAAKSSTQSQSQSQQSSSQNFSPKSNQSSNQSSNSSSSSSS SGGGGGGGNSINNNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTNSL TSFPFHDALQHGYLASNGAKSNSSASSTSSASGMGLGMSMGIGQGMIIGQ GLGMGHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGSKQLLQ KSVSTPMQQEDTPRLPVFNRLSSGVEAYQQQSNLGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21384-PA | 470 | GF21384-PA | 1..470 | 1..436 | 978 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17735-PA | 457 | GG17735-PA | 1..457 | 1..436 | 1528 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17894-PA | 425 | GH17894-PA | 32..382 | 68..424 | 877 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tis11-PD | 436 | CG4070-PD | 1..436 | 1..436 | 2299 | 100 | Plus |
Tis11-PC | 436 | CG4070-PC | 1..436 | 1..436 | 2299 | 100 | Plus |
Tis11-PA | 436 | CG4070-PA | 1..436 | 1..436 | 2299 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 190..482 | 51..343 | 165 | 25.5 | Plus |
Smr-PE | 3601 | CG4013-PE | 190..482 | 51..343 | 165 | 25.5 | Plus |
Smr-PD | 3601 | CG4013-PD | 190..482 | 51..343 | 165 | 25.5 | Plus |
Smr-PG | 3607 | CG4013-PG | 196..488 | 51..343 | 165 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21684-PA | 411 | GI21684-PA | 1..313 | 1..306 | 745 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13141-PA | 446 | GL13141-PA | 1..439 | 1..431 | 1010 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17935-PA | 456 | GA17935-PA | 1..449 | 1..431 | 1023 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11580-PA | 431 | GM11580-PA | 1..431 | 1..436 | 1654 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15863-PA | 433 | GJ15863-PA | 45..411 | 68..427 | 900 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25600-PA | 451 | GK25600-PA | 1..451 | 1..436 | 974 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17025-PA | 448 | GE17025-PA | 1..448 | 1..436 | 1548 | 85.3 | Plus |
Translation from 367 to 1677
> LD36337.hyp MSADILQKSREQDDSHYFERGDISKYVTMNDHLGDFDCNEVRKEIRMLLA HGANLDQQHQQQPHRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVAS LVTITENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGEC KYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNA DEARAQQAAQAAKSSTQSQSQSQQSSSQNFSPKSNQSSNQSSNSSSSSSS SGGGGGGGNSINNNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTNSL TSFPFHDALQHGYLASNGAKSNSSASSTSSASGMGLGMSMGIGQGMIIGQ GLGMGHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGSKQLLQ KSVSTPMQQEDTPRLPVFNRLSSGVEAYQQQSNLGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tis11-PD | 436 | CG4070-PD | 1..436 | 1..436 | 2299 | 100 | Plus |
Tis11-PC | 436 | CG4070-PC | 1..436 | 1..436 | 2299 | 100 | Plus |
Tis11-PA | 436 | CG4070-PA | 1..436 | 1..436 | 2299 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 190..482 | 51..343 | 165 | 25.5 | Plus |
Smr-PE | 3601 | CG4013-PE | 190..482 | 51..343 | 165 | 25.5 | Plus |