BDGP Sequence Production Resources |
Search the DGRC for LD36405
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 364 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | slam-RB |
Protein status: | LD36405.pep: gold |
Sequenced Size: | 4064 |
Gene | Date | Evidence |
---|---|---|
slam | 2008-04-29 | Release 5.5 accounting |
slam | 2008-04-29 | Picked prior to 5.5 |
slam | 2008-08-15 | Release 5.9 accounting |
slam | 2008-12-18 | 5.12 accounting |
4064 bp assembled on 2007-10-10
GenBank Submission: BT031138
> LD36405.complete ACCACGCTTTTTCGCGGTCTTTTGTTTACAAAATTAATTTGTAATTTGTT TATGAAGTTGTGCGTGTTAAATACTGTGTTGCCTAAAGTAGATCATAGTT CAACAAGGAAATCCTTAACAAAGTCACCTGGATATATATTTATAGCGGAA AGGTTCGCGAAAATAATTAAATATCGGTTAGCGCGAGGAAAATCCATCGA TCCGACAGCTGCGGCTGTTAATCTTACCTGATCGCTGCTAGTTGGATTAA GGAAAATCTGAGGCAGTGGGTGGGCAATAAAATCTGCACCCAATCCATAT TTTACCTGATCATTGTATATAAGCTATTAGCAAAATGCCAGAAAGCCACA GTTACAAACTGAAACGTCTAACGTCAACAACAAGACAGCAAACTAATACC AAAATGGTCCTAAGCAATTCCACGCCGAACAACCAGTCCAAGCACAACCA GATGGTAGTGGACACGGCAGCCATGAACAGTGATGATCTCAGCGAGCTAC TGCAGCTGAACGCGGAGATCGAGGAACGTCGTCGCTCCAGCCGCCACGGA GATGCCAGCACCGCCTGTGGCCTGCTCCGAGCTACGATGACCAGGGAGGA ACTCTTCGAGATTTCCTCGCTGGATGATGATCGCTTCCTGACCGCCCTGG AGTACCAAAACTCGTTTGCATCACCGCGCCGAGTGCAGGTTACCGACCTG GACTTGTCCAGCATCGAGAATCTGATGAAGTACTTCGACGAAGAGGTACC TGTGACGCCAACAAAGACACTGGGTACCACCAAGGCAGCGGGTAACACGG GTAAAGTGGCCAGCACAATTGCCAAGTTGGCCCTCCAGTCGGATCCGGTC ACGCCGCCCAAGCCAAAAGTGGGTAGTGGCCACCTAAAGATCAGCGAGCT CAAGCAGAAATACGAACAGCTGCCGGAGATGGAGACGCCACGCTCTGCAT ATCAGGCTTCCAGAAAGGTATCCGCGTCGCTGCCCATGAAGGTCAAGGAG ATGGCCCAGCTGTTTAACTCCAAGATCAGCCAGGTGATGCGACGTACAGA GGAACCACAGTATGTTCAGCTGCAAAATGAGATGTCGCCGGAGGTTAAGG CACAGAACCGCCTGGTGTCGCCATTAGAGTCCCCAGTTCAAGGACCCTGC CTGGTGGCCGAGGAAGTTTTCCGCGAGTTGAGCGTGAAGGACAAAGCCCT GCTGTTCAACAAGTTCATCGGTGACATGGCAGCCAAGCACCCCAAGTTCA CTGCACATGCCGCAGATCTCAAGGAGAAGGTAAACAAACAGGTGGCACGA GGGGAGGTGGTGGCTGAACGACAAGCCAGTGTTAAGCATCTCGCCCAGGA GTTGGAAGCGAAATGTATCCTGGAGCCGGGATCGCCACCGCGACCAGGTG GTGTCTCTCCCCCCAAGACGACTGAGAGCAAAACGGAGACATGCACCTCC CAGCTGCATGTGAGCACCCTGACTGTGATCCTCAAGCCAAGTCCAGAGCG CAGAGCTCCACAGCCACGACCCCGCCGATGCCTGGATCGTCAGAGCGATG AACATGCCCGAGAGCCATCCCAGAAGCGAAACCTCGCCGCGATTCGCACC ATGATGCCAACGGAGGCCTATGCGCCACCAAAGAAAATCCGACGCACTCG ACAGGAGCGCACCGGTGCGGATAGCCAAATGTTTTTTCAGAACGAACACC TCGAAACCCTGTTCTACAGCTGGCTCAGCTCGGAGAACGGTGTCCAGTTC GACATTACGAGTGTGTCTGACGGTCAGCAGACCATTGAGATAGCCACCGA GGAGGGTAATCTTCTGGAGCAACCGCTACTTGAGCCGAGCACCGCTACTC TGGAGGATGTGAGCCAAAAGTCCGCCGTCGAGCGGCTTCTGGAGGAGGCC ATCGCAAAATTAGAGCTAGATAACGAGTCCAAGAAGGAGACACAAGTCGA GGAAAAGAAGGAGATGGATACAGCTCAGGATCCCATCGTTCAAGTCACTC CGCGACGCATTAAGCGCCAGGCGCCGCCAGTGCCAGCCCCACGACCCAGT CTAAGTCAAGTTACCTCCAGTGCATCCAGCTGCAAGCAATCCGAGGCTGA GGAAAGTGAATCCGGGTTGTCTACACTCCCCAAGATAACCAGCGACGAAT CCCAGCCAGAGACGCCCAAGGATGACTTGCAGACAGGTGAATTTGATTTT GCCAAGCCCCAGCGTCCGCCACGCAAGAAGAAAATGCGCCGAACTCTTAC ATGGAAAAAGGAGAACTCCATTGTCGAGGCCACTGCAATAACCTCAACGG ACTCCGATTCAGATTACAAGCCTCCGCTATCAGGAGCGGCCAAGAAGAAG TCCGGTGCTATCTGTAACCCACTTCCAATGCCCGAGCCAAGTTTCATTGA GTTGGATAAGTCACTGATGCGCCACTTGAACTCGCCCCGGAAGATCAAGT CGGCATACACCCTCACCGTGATGTCATCTCCCTCGCCGAATGCAGACAGC GATCAGTCTCCTAGTCAGACACCAAGGCAATCCCTGGTACAGGCCATGCG GGACAGTTTCGTGGATCAGGGCTTTGAGACATGCTCGAACGATCCGATGG ACAACAGTCCGATACGCCGATCTTCGCTTGGAGCCACGGAATCGAAGCCA TCCGGTTTTTCCACGCCAGTTAAGGGACGCCATGCTTCCAGTCCGGCGCA ACAACAACTGTTCAGTCCGATTCTCATCCAGGAGCGCCCTCGTCGCAGTT CCCTGGCCATGCAAGTGATCCGGGAGGATCATCCGCTCGATCTGGACGCC ACCTCCAGCTCACCCTCCACACCGTGCAGTGAGCGGGAGTTCTTCGCCAA TGCCCCGACTGTTGAAATTGATAACTCCCAGGATGAGAGTCCGACCGGCA AGGCGCACTCAATGTTCTGGATCACCTCTGGGGACTTCACAGTCTCCCTG GAAATCTTCAAGAACAGCCCGGAGCGCCTGCGACTGCTGTACGAAATCTT CACCCAGAAAAGCTGGGAGACTCGTGACCTGGCCTTCGGAATCGACGGAC ACAAGTTCATTCGCGGAGCTCCCAGTTCCGACTCCGTCCGACAGTCGCTG CCCGAGCGTCCACCCAGTGTGAAGGGCTGCTCTCACTATTGGTTCGCCAG CGGAGATCTCGCAGTGCCCTTCAGCGGAAAACTGATGTCCAGCGAGAAGA TCGAGCGGCTGTTTGCCTTCCTCAGCGGAGAGCAGTCGGAGTTGCGCTTC GGCGTTGACCACATTGAGTTCAGCAGCGTGCCTGAGTTCTGGCCCACCAC CCAGAAGTATTCCATCGAGAGCAGCTACAGCATACTGGTGGGTCTGCAGA CAGGTGCCAGCAATGGCCTGGAGGGTCGCAGCAAGTACTCCTGGCCCAAC AGCAGCATCAGTGCCAACCAGGCGATCAAGACCAGCGACCTGGATCAGAC GGAGTTCGAGTCCGATAGCTTCGGCAACAACAGTGGTAGGCTGTCCTTTT CGCCTGATCTCTTCTCCCTGGACTACGAGGCGGTTCCCCTGGACGAGCTG TTTGCCAAGGCTCCTCCCTCTGCCGCCACACCCGCCATGTCCGTGCCGCA AATGATGCAGACCCTCAAGCAGCAGCAGTCCAAACTTCGCAGTGTGGAGC AGCGCATTCGTGGCTACGCCAAGCCCGCGAATCTGGCCGACTCTTCGCTG GAGCACTGCCGCAACACGCCGCAATATGTCCACAAGCTGCGCTCCATCAT CCGGGCCATTGACAACATTGGACGCGACGATGGCTTCCGCGGCTGCTCGA TGGAGCAGCTCGAGAGCTTCATGTACTTCCTCAGCGAGTATGCGGATGTG TGCCTGGCCAACTGCAGCGAGCACATGGACAAGATTCTCGACACCCTGAT GGACCGGAGGGCCGTGGAGGTCTGAGCGATGGTGCTACCTCATCGGGATC TGACTTTATTTTAAGATTTTATAAACAATTAGTTCCTAGACATTAACATA TAATGTTACAAAGATTTTAGATAATAAACTTTAAAGAGAAAAGTTAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6372292..6374307 | 123..2138 | 10065 | 100 | Plus |
chr2L | 23010047 | chr2L | 6374368..6376280 | 2133..4045 | 9565 | 100 | Plus |
chr2L | 23010047 | chr2L | 6371456..6371579 | 1..124 | 605 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6373296..6375311 | 123..2138 | 10065 | 99.9 | Plus |
2L | 23513712 | 2L | 6375372..6377287 | 2133..4048 | 9580 | 100 | Plus |
2L | 23513712 | 2L | 6372460..6372583 | 1..124 | 620 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 5177..5237 | 334..395 | 136 | 71 | Plus |
412 | 7567 | 412 412 7567bp | 1360..1441 | 3958..4044 | 135 | 65.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6955 | 3313..3486 | 134 | 59.4 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1536..1599 | 81..18 | 122 | 65.6 | Minus |
HMS-Beagle2 | 7220 | HMS-Beagle2 Beagle2 7220bp | 721..804 | 3952..4034 | 120 | 68.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6371456..6371577 | 1..122 | 99 | -> | Plus |
chr2L | 6372292..6374303 | 123..2134 | 100 | -> | Plus |
chr2L | 6374370..6376280 | 2135..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 1..3522 | 404..3925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 1..3522 | 404..3925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 1..3522 | 404..3925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 1..3522 | 404..3925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 1..3522 | 404..3925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 46..4090 | 1..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 46..4090 | 1..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 73..4117 | 1..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 46..4090 | 1..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slam-RB | 73..4117 | 1..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6372460..6372581 | 1..122 | 100 | -> | Plus |
2L | 6373296..6375307 | 123..2134 | 100 | -> | Plus |
2L | 6375374..6377284 | 2135..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6372460..6372581 | 1..122 | 100 | -> | Plus |
2L | 6373296..6375307 | 123..2134 | 100 | -> | Plus |
2L | 6375374..6377284 | 2135..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6372460..6372581 | 1..122 | 100 | -> | Plus |
2L | 6373296..6375307 | 123..2134 | 100 | -> | Plus |
2L | 6375374..6377284 | 2135..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6372460..6372581 | 1..122 | 100 | -> | Plus |
arm_2L | 6373296..6375307 | 123..2134 | 100 | -> | Plus |
arm_2L | 6375374..6377284 | 2135..4045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6373296..6375307 | 123..2134 | 100 | -> | Plus |
2L | 6375374..6377284 | 2135..4045 | 100 | Plus | |
2L | 6372460..6372581 | 1..122 | 100 | -> | Plus |
Translation from 334 to 3924
> LD36405.pep MPESHSYKLKRLTSTTRQQTNTKMVLSNSTPNNQSKHNQMVVDTAAMNSD DLSELLQLNAEIEERRRSSRHGDASTACGLLRATMTREELFEISSLDDDR FLTALEYQNSFASPRRVQVTDLDLSSIENLMKYFDEEVPVTPTKTLGTTK AAGNTGKVASTIAKLALQSDPVTPPKPKVGSGHLKISELKQKYEQLPEME TPRSAYQASRKVSASLPMKVKEMAQLFNSKISQVMRRTEEPQYVQLQNEM SPEVKAQNRLVSPLESPVQGPCLVAEEVFRELSVKDKALLFNKFIGDMAA KHPKFTAHAADLKEKVNKQVARGEVVAERQASVKHLAQELEAKCILEPGS PPRPGGVSPPKTTESKTETCTSQLHVSTLTVILKPSPERRAPQPRPRRCL DRQSDEHAREPSQKRNLAAIRTMMPTEAYAPPKKIRRTRQERTGADSQMF FQNEHLETLFYSWLSSENGVQFDITSVSDGQQTIEIATEEGNLLEQPLLE PSTATLEDVSQKSAVERLLEEAIAKLELDNESKKETQVEEKKEMDTAQDP IVQVTPRRIKRQAPPVPAPRPSLSQVTSSASSCKQSEAEESESGLSTLPK ITSDESQPETPKDDLQTGEFDFAKPQRPPRKKKMRRTLTWKKENSIVEAT AITSTDSDSDYKPPLSGAAKKKSGAICNPLPMPEPSFIELDKSLMRHLNS PRKIKSAYTLTVMSSPSPNADSDQSPSQTPRQSLVQAMRDSFVDQGFETC SNDPMDNSPIRRSSLGATESKPSGFSTPVKGRHASSPAQQQLFSPILIQE RPRRSSLAMQVIREDHPLDLDATSSSPSTPCSEREFFANAPTVEIDNSQD ESPTGKAHSMFWITSGDFTVSLEIFKNSPERLRLLYEIFTQKSWETRDLA FGIDGHKFIRGAPSSDSVRQSLPERPPSVKGCSHYWFASGDLAVPFSGKL MSSEKIERLFAFLSGEQSELRFGVDHIEFSSVPEFWPTTQKYSIESSYSI LVGLQTGASNGLEGRSKYSWPNSSISANQAIKTSDLDQTEFESDSFGNNS GRLSFSPDLFSLDYEAVPLDELFAKAPPSAATPAMSVPQMMQTLKQQQSK LRSVEQRIRGYAKPANLADSSLEHCRNTPQYVHKLRSIIRAIDNIGRDDG FRGCSMEQLESFMYFLSEYADVCLANCSEHMDKILDTLMDRRAVEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14518-PA | 1169 | GF14518-PA | 1..1169 | 24..1196 | 4564 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10408-PA | 1175 | GG10408-PA | 1..1175 | 24..1196 | 5763 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10746-PA | 1208 | GH10746-PA | 1..1208 | 24..1196 | 3803 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slam-PC | 1173 | CG9506-PC | 1..1173 | 24..1196 | 5990 | 100 | Plus |
slam-PB | 1173 | CG9506-PB | 1..1173 | 24..1196 | 5990 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11564-PA | 1217 | GI11564-PA | 1..1217 | 24..1196 | 3784 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25523-PA | 851 | GL25523-PA | 1..851 | 24..884 | 2958 | 71.9 | Plus |
Dper\GL25524-PA | 240 | GL25524-PA | 1..240 | 963..1196 | 1092 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21841-PA | 1189 | GA21841-PA | 1..1189 | 24..1196 | 4539 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18624-PA | 1196 | GM18624-PA | 1..1196 | 1..1196 | 6192 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23406-PA | 1196 | GD23406-PA | 1..1196 | 1..1196 | 6194 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12848-PA | 1205 | GJ12848-PA | 1..1205 | 24..1196 | 3905 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14757-PA | 1173 | GK14757-PA | 1..1173 | 24..1196 | 4135 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13835-PA | 1176 | GE13835-PA | 1..1176 | 24..1196 | 5765 | 93.5 | Plus |
Translation from 334 to 3924
> LD36405.hyp MPESHSYKLKRLTSTTRQQTNTKMVLSNSTPNNQSKHNQMVVDTAAMNSD DLSELLQLNAEIEERRRSSRHGDASTACGLLRATMTREELFEISSLDDDR FLTALEYQNSFASPRRVQVTDLDLSSIENLMKYFDEEVPVTPTKTLGTTK AAGNTGKVASTIAKLALQSDPVTPPKPKVGSGHLKISELKQKYEQLPEME TPRSAYQASRKVSASLPMKVKEMAQLFNSKISQVMRRTEEPQYVQLQNEM SPEVKAQNRLVSPLESPVQGPCLVAEEVFRELSVKDKALLFNKFIGDMAA KHPKFTAHAADLKEKVNKQVARGEVVAERQASVKHLAQELEAKCILEPGS PPRPGGVSPPKTTESKTETCTSQLHVSTLTVILKPSPERRAPQPRPRRCL DRQSDEHAREPSQKRNLAAIRTMMPTEAYAPPKKIRRTRQERTGADSQMF FQNEHLETLFYSWLSSENGVQFDITSVSDGQQTIEIATEEGNLLEQPLLE PSTATLEDVSQKSAVERLLEEAIAKLELDNESKKETQVEEKKEMDTAQDP IVQVTPRRIKRQAPPVPAPRPSLSQVTSSASSCKQSEAEESESGLSTLPK ITSDESQPETPKDDLQTGEFDFAKPQRPPRKKKMRRTLTWKKENSIVEAT AITSTDSDSDYKPPLSGAAKKKSGAICNPLPMPEPSFIELDKSLMRHLNS PRKIKSAYTLTVMSSPSPNADSDQSPSQTPRQSLVQAMRDSFVDQGFETC SNDPMDNSPIRRSSLGATESKPSGFSTPVKGRHASSPAQQQLFSPILIQE RPRRSSLAMQVIREDHPLDLDATSSSPSTPCSEREFFANAPTVEIDNSQD ESPTGKAHSMFWITSGDFTVSLEIFKNSPERLRLLYEIFTQKSWETRDLA FGIDGHKFIRGAPSSDSVRQSLPERPPSVKGCSHYWFASGDLAVPFSGKL MSSEKIERLFAFLSGEQSELRFGVDHIEFSSVPEFWPTTQKYSIESSYSI LVGLQTGASNGLEGRSKYSWPNSSISANQAIKTSDLDQTEFESDSFGNNS GRLSFSPDLFSLDYEAVPLDELFAKAPPSAATPAMSVPQMMQTLKQQQSK LRSVEQRIRGYAKPANLADSSLEHCRNTPQYVHKLRSIIRAIDNIGRDDG FRGCSMEQLESFMYFLSEYADVCLANCSEHMDKILDTLMDRRAVEV*