BDGP Sequence Production Resources |
Search the DGRC for LD36412
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 364 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5482-RA |
Protein status: | LD36412.pep: gold |
Preliminary Size: | 1684 |
Sequenced Size: | 1635 |
Gene | Date | Evidence |
---|---|---|
CG5482 | 2001-01-01 | Release 2 assignment |
CG5482 | 2001-09-19 | Blastp of sequenced clone |
CG5482 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5482 | 2008-04-29 | Release 5.5 accounting |
CG5482 | 2008-08-15 | Release 5.9 accounting |
CG5482 | 2008-12-18 | 5.12 accounting |
1635 bp (1635 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058659
> LD36412.complete TCACACTGGCTAGCTGGCAGAAGTCCGTAAAATTATTTTTCGTTTCCCAG TAACTTTCTTGTCGCATTTTGCTTTTGAAATCAAATTAAATCATTTTTTT TACCAAAATCCGATATCACAATCAGATACTGCTGTAATTATGGATACGGA GAAGTCTAGCAGCAGCTCCTTCGAGGACCTGACCAACGCCGAGGACACCA AAGACATTCGCAAGGTGGCAGCGGAGGAGGCAGCCTCCGGAGATGGCGCA CCCCCGGCATCCGTTTCTGGAGACGGACAGAAGGCGGAGGAGGAGGATGC AGAGGAGGAATGTGATATACTGGGTAACAAGCAGCTGATTAAGCGCACCA TCAAAAAGGCACCGCAAGACTCGTTTAGGCGTCCGATTCGCGGCGAATTG GTCACCGTGAACTTCACTGGAAAACTGGACAACGGCACGGTGGTCGAGAA CGAGTTGAACTTCCAGTGTCACGTGGGAGACTACGAGGTTATCCAAGGAT TAGATATGGTGTTGCCCATGCTGCAGGTCGGCGAAGTGTCCCAAGTCAGC GTGGATTCCCGCTTCGGCTACGGCTCCCTAGGACTGAAAAAAGAGGGTGA ATCCGAGTACCTGGTACCACCCGATGCGCACCTTACCTACGAAATAGAGC TTCTGGATATCAAATACGAAGAATTTGCGGACCTTAAGAGCTTTGAAATA CTGCGCAAATATGGTACGCGCAAGAAAGAACGTGCCAATTTCTTTTACAA ACGCTCGGAGTTCACAACCGCCATTCACCTGTACAGACGTGCCCTCGACT TTCTGGACAATCGTGATGGGGATCCGGACTCCGAGTTCGACAAGGAAGAC TTGGAGCTCTCGAACAGTGACACGCAGACCCTGCTAGAGGATCGGTTGAT CGTTTACAATAACTTGGCAATGACTCAAATCAAGATTGCCGCTTATGACG CAGCTCTGCAGTCCGTGGAGCATGTGCTGCGGTGCCAGCCAAATAACTCC AAAGCCTTGTATCGCAAAGGAAGAATATTGGAGGGCAAAGCGGACACCCA GGGTGCTATTAAGCTACTGCAAAAAGTGGCTACTCTCGAACCCGAAAATC GAGCCGTTCAATCGGATTTGGCCAGACTTTTCATCAAGGCTCGTCGTGAG GAGCACAACGAAAAGGAGATGTATCAAAAGATGCTGGGCCAGGCCAAAAA AATGGAGCAGAATACTGCCACCAGGCAAAAGCAGCCGCTTGTCGACAATT CCAAGCTGAAGCTGCTTGGCTATCTAATGGGTACGATATTAATTGGAGTG GCTGGCGTCGCTATTTATCGTTACAAGTACTAAGGACAAGCATTGCACAC GAACTACTGGTTATTTTAAGCAATTGAAATGCATTTTTTAAGTATATATA GAAGGCAAAATTATGAATGTTGGAAAGTCGCAGTTGCTTATTATGATGAT ATGGCTCTCGTTGTACATTTAATGCTATGCACACTTCACAATAGTATGTA TCTTTCAAATAGTATGGTTTTGGATATCGTACATATAATGTTAAAGCTTA AGTTTAATCAACTACATTCTGTCAGACAAGTAACGGGAATTGTTAAAATA AACACAATATTCTCATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5482-RA | 2167 | CG5482-RA | 156..1775 | 1..1618 | 8045 | 99.8 | Plus |
CG5482.a | 1606 | CG5482.a | 64..1556 | 126..1618 | 7465 | 100 | Plus |
CG5482.d | 1689 | CG5482.d | 155..1639 | 134..1618 | 7425 | 100 | Plus |
CG5482.d | 1689 | CG5482.d | 15..149 | 1..133 | 620 | 98.5 | Plus |
CG5482.a | 1606 | CG5482.a | 15..63 | 1..49 | 245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14518256..14518753 | 631..134 | 2475 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 14517037..14517400 | 1617..1254 | 1820 | 100 | Minus |
chr2R | 21145070 | chr2R | 14517752..14518062 | 1024..714 | 1525 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 14517456..14517690 | 1259..1025 | 1085 | 97.4 | Minus |
chr2R | 21145070 | chr2R | 14518869..14519008 | 137..1 | 620 | 97.9 | Minus |
chr2R | 21145070 | chr2R | 14518119..14518201 | 714..632 | 385 | 97.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18631133..18631630 | 631..134 | 2490 | 100 | Minus |
2R | 25286936 | 2R | 18629914..18630278 | 1618..1254 | 1825 | 100 | Minus |
2R | 25286936 | 2R | 18630629..18630939 | 1024..714 | 1555 | 100 | Minus |
2R | 25286936 | 2R | 18630334..18630568 | 1259..1025 | 1160 | 99.6 | Minus |
2R | 25286936 | 2R | 18631746..18631884 | 137..1 | 630 | 98.6 | Minus |
2R | 25286936 | 2R | 18630996..18631078 | 714..632 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18632332..18632829 | 631..134 | 2490 | 100 | Minus |
2R | 25260384 | 2R | 18631113..18631477 | 1618..1254 | 1825 | 100 | Minus |
2R | 25260384 | 2R | 18631828..18632138 | 1024..714 | 1555 | 100 | Minus |
2R | 25260384 | 2R | 18631533..18631767 | 1259..1025 | 1160 | 99.5 | Minus |
2R | 25260384 | 2R | 18632945..18633083 | 137..1 | 640 | 98.5 | Minus |
2R | 25260384 | 2R | 18632195..18632277 | 714..632 | 415 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14517037..14517398 | 1256..1617 | 100 | <- | Minus |
chr2R | 14517460..14517690 | 1025..1255 | 97 | <- | Minus |
chr2R | 14517752..14518061 | 715..1024 | 99 | <- | Minus |
chr2R | 14518119..14518201 | 632..714 | 97 | <- | Minus |
chr2R | 14518256..14518753 | 134..631 | 99 | <- | Minus |
chr2R | 14518873..14519008 | 1..133 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 1..1194 | 140..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 1..1194 | 140..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 1..1194 | 140..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 1..1194 | 140..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RB | 1..1194 | 140..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 15..1633 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 15..1633 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 19..1637 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 15..1633 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5482-RA | 19..1637 | 1..1617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18629915..18630276 | 1256..1617 | 100 | <- | Minus |
2R | 18630338..18630568 | 1025..1255 | 100 | <- | Minus |
2R | 18630629..18630938 | 715..1024 | 100 | <- | Minus |
2R | 18630996..18631078 | 632..714 | 100 | <- | Minus |
2R | 18631133..18631630 | 134..631 | 100 | <- | Minus |
2R | 18631750..18631884 | 1..133 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18629915..18630276 | 1256..1617 | 100 | <- | Minus |
2R | 18630338..18630568 | 1025..1255 | 100 | <- | Minus |
2R | 18630629..18630938 | 715..1024 | 100 | <- | Minus |
2R | 18630996..18631078 | 632..714 | 100 | <- | Minus |
2R | 18631133..18631630 | 134..631 | 100 | <- | Minus |
2R | 18631750..18631884 | 1..133 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18629915..18630276 | 1256..1617 | 100 | <- | Minus |
2R | 18630338..18630568 | 1025..1255 | 100 | <- | Minus |
2R | 18630629..18630938 | 715..1024 | 100 | <- | Minus |
2R | 18630996..18631078 | 632..714 | 100 | <- | Minus |
2R | 18631133..18631630 | 134..631 | 100 | <- | Minus |
2R | 18631750..18631884 | 1..133 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14517420..14517781 | 1256..1617 | 100 | <- | Minus |
arm_2R | 14517843..14518073 | 1025..1255 | 100 | <- | Minus |
arm_2R | 14518134..14518443 | 715..1024 | 100 | <- | Minus |
arm_2R | 14518501..14518583 | 632..714 | 100 | <- | Minus |
arm_2R | 14518638..14519135 | 134..631 | 100 | <- | Minus |
arm_2R | 14519255..14519389 | 1..133 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18631114..18631475 | 1256..1617 | 100 | <- | Minus |
2R | 18631537..18631767 | 1025..1255 | 100 | <- | Minus |
2R | 18631828..18632137 | 715..1024 | 100 | <- | Minus |
2R | 18632195..18632277 | 632..714 | 100 | <- | Minus |
2R | 18632332..18632829 | 134..631 | 100 | <- | Minus |
2R | 18632949..18633083 | 1..133 | 98 | Minus |
Translation from 139 to 1332
> LD36412.pep MDTEKSSSSSFEDLTNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAE EEDAEEECDILGNKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKLDNGT VVENELNFQCHVGDYEVIQGLDMVLPMLQVGEVSQVSVDSRFGYGSLGLK KEGESEYLVPPDAHLTYEIELLDIKYEEFADLKSFEILRKYGTRKKERAN FFYKRSEFTTAIHLYRRALDFLDNRDGDPDSEFDKEDLELSNSDTQTLLE DRLIVYNNLAMTQIKIAAYDAALQSVEHVLRCQPNNSKALYRKGRILEGK ADTQGAIKLLQKVATLEPENRAVQSDLARLFIKARREEHNEKEMYQKMLG QAKKMEQNTATRQKQPLVDNSKLKLLGYLMGTILIGVAGVAIYRYKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12939-PA | 396 | GF12939-PA | 1..396 | 1..397 | 1678 | 81.2 | Plus |
Dana\GF14673-PA | 440 | GF14673-PA | 133..394 | 67..349 | 239 | 25 | Plus |
Dana\GF11585-PA | 108 | GF11585-PA | 9..108 | 74..175 | 145 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20961-PA | 397 | GG20961-PA | 1..397 | 1..397 | 1904 | 94 | Plus |
Dere\GG10059-PA | 439 | GG10059-PA | 132..393 | 67..349 | 228 | 26.2 | Plus |
Dere\GG21957-PA | 108 | GG21957-PA | 9..108 | 74..175 | 145 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21577-PA | 401 | GH21577-PA | 1..401 | 1..397 | 1543 | 74.6 | Plus |
Dgri\GH11297-PA | 441 | GH11297-PA | 142..415 | 77..369 | 209 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
zda-PD | 397 | CG5482-PD | 1..397 | 1..397 | 2013 | 100 | Plus |
zda-PC | 397 | CG5482-PC | 1..397 | 1..397 | 2013 | 100 | Plus |
zda-PB | 397 | CG5482-PB | 1..397 | 1..397 | 2013 | 100 | Plus |
zda-PA | 397 | CG5482-PA | 1..397 | 1..397 | 2013 | 100 | Plus |
Fkbp59-PB | 439 | CG4535-PB | 132..403 | 67..359 | 239 | 25.1 | Plus |
Fkbp59-PA | 439 | CG4535-PA | 132..403 | 67..359 | 239 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19549-PA | 401 | GI19549-PA | 1..401 | 1..397 | 1576 | 75.6 | Plus |
Dmoj\GI17716-PA | 441 | GI17716-PA | 133..395 | 67..349 | 214 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11238-PA | 394 | GL11238-PA | 1..394 | 1..397 | 1659 | 78.6 | Plus |
Dper\GL18937-PA | 440 | GL18937-PA | 140..372 | 75..327 | 197 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18915-PA | 394 | GA18915-PA | 1..394 | 1..397 | 1666 | 78.8 | Plus |
Dpse\GA18239-PA | 440 | GA18239-PA | 140..372 | 75..327 | 197 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19892-PA | 397 | GM19892-PA | 1..397 | 1..397 | 2060 | 97.2 | Plus |
Dsec\GM17712-PA | 439 | GM17712-PA | 132..393 | 67..349 | 223 | 26 | Plus |
Dsec\GM21945-PA | 108 | GM21945-PA | 9..108 | 74..175 | 146 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25378-PA | 398 | GD25378-PA | 1..398 | 1..397 | 2057 | 97.5 | Plus |
Dsim\GD25374-PA | 129 | GD25374-PA | 1..92 | 261..353 | 348 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21121-PA | 402 | GJ21121-PA | 1..402 | 1..397 | 1597 | 74 | Plus |
Dvir\GJ17544-PA | 441 | GJ17544-PA | 133..415 | 67..369 | 240 | 24.9 | Plus |
Translation from 139 to 1332
> LD36412.hyp MDTEKSSSSSFEDLTNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAE EEDAEEECDILGNKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKLDNGT VVENELNFQCHVGDYEVIQGLDMVLPMLQVGEVSQVSVDSRFGYGSLGLK KEGESEYLVPPDAHLTYEIELLDIKYEEFADLKSFEILRKYGTRKKERAN FFYKRSEFTTAIHLYRRALDFLDNRDGDPDSEFDKEDLELSNSDTQTLLE DRLIVYNNLAMTQIKIAAYDAALQSVEHVLRCQPNNSKALYRKGRILEGK ADTQGAIKLLQKVATLEPENRAVQSDLARLFIKARREEHNEKEMYQKMLG QAKKMEQNTATRQKQPLVDNSKLKLLGYLMGTILIGVAGVAIYRYKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5482-PD | 397 | CG5482-PD | 1..397 | 1..397 | 2013 | 100 | Plus |
CG5482-PC | 397 | CG5482-PC | 1..397 | 1..397 | 2013 | 100 | Plus |
CG5482-PB | 397 | CG5482-PB | 1..397 | 1..397 | 2013 | 100 | Plus |
CG5482-PA | 397 | CG5482-PA | 1..397 | 1..397 | 2013 | 100 | Plus |
FKBP59-PB | 439 | CG4535-PB | 132..403 | 67..359 | 239 | 25.1 | Plus |