BDGP Sequence Production Resources |
Search the DGRC for LD36516
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 365 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | prel-RB |
Protein status: | LD36516.pep: gold |
Preliminary Size: | 1664 |
Sequenced Size: | 1545 |
Gene | Date | Evidence |
---|---|---|
CG8806 | 2001-10-10 | Blastp of sequenced clone |
CG8806 | 2003-01-01 | Sim4 clustering to Release 3 |
prel | 2008-04-29 | Release 5.5 accounting |
prel | 2008-08-15 | Release 5.9 accounting |
prel | 2008-12-18 | 5.12 accounting |
1545 bp (1545 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061437
> LD36516.complete GCCTTTGAACAGGCGTAAATTGTATCCAAATTGGCAGCAAACCCTTGGAA AGCAAGCAATGAAACCGTGTACAGACAGGAGAAGGGGGCACTGAAGGTCG AGGCAACGCAGGAATCGAGGGATATCGCCAGCAAATTGCCAGAAATTGAA GGCGCCCAAAGTCGGGGCAACAACAAGCTGCTAGCTGAATCAACGTGTGC CAGCTAATTGGTGCCAATCACACTGCACTCTGGAGCTCTAAAACCGTAAG AGACCCCCGTTCTTGGACCCCCTCGCAAAGATCAGGGACACGGCGGCTTT CACTTTCGAACACATCGGCGAGTTCATTGGTCCACCTTCAACATGGTCGT GGCAGCATCCACCTGCCGCACGGAGACGGTCTTCGATTACAGCTGGATGA ACGTGGTGGTCGCCTACTGGAACCGCTACCCGAATCCCTCAAGCACGCAC GTCCTCACCGAGGACACTATTCAGCGGGAGGTGCGCGATGGCAAGCTCTT CTCGCGCCGGCTGCTCTCCAAGACGAATCCGGTGCCGAAGTGGGGAGCTC GCTTCTACAACAATGTGCCGGTCAAGATTGTTGAGGACTCCGTGCTGGAC CCGGTTAAAAAGACATTCACCACTTTCACCAGGAACCTGGGAATGACCAA GATAATGAAAGTCGATGAAATTGTCGTCTACAGCGAGCAGAAGGATGGTA GTACTCTGGCGGTGCGAAGAGCATACATTAGTTCGCAGGTGTTCGGATTC TCGCGGGCCATTCGCGCCTTCGGCATCGAACGGTTTAAGGCCAATGGCAA CAAGGCCTCCAATGGATTCAACTACGTGCTGCGGCGCATGTTTCCGGACA GTTTGGTTGGTGGAGGACATCACCAGCACGCGGTGACGACGACTTCGCCA GCTGGAGAACTTCCTGCAACGACCATCACCGTATCCACAACAAACGGCAG TCTCAACAACCAAGGAGCTCTCAAGAGCGCCGCAAAAGTGGGCTACGAGT TCTTCAAGAGTCATGCCTCCAAGATTGCGCAACTGTTTTCTGTCAAGAAC TGAGGAACTTCTAGTCTGTACTTTTTGGAATAGATGTCGAATGGGACCGA AGATTTTAATGCTTTCGGCTCCGGGAGTTAAGGAGTTTGTGGATTTGACC AGGACGGAATTAGAATGACGAGCGGAGGAGTCGTGTCGCCGGGTGTTTTT AAACATTTATTCCAAAGCAAATCCAACTACATACTTTGCTGCATTTCATT CCGTGTGTGCGCGAATCAAACGGCTGATCTGAACGGAGACACAATTTGCT GAACACATTTCCTGCATGCTACCAAATTCTATTATTTATCGTTACTTATT TGCACTACATTATTATGTATCATTCTGTTAGGTCAAGAGCAGGAAATGAA AAGCCGTGTCAAAATTGGTATTGCTATGTAATATGTTGTATATTTTTATC AAAATATAAGAAAACCAACACTTGTAGTGGTTAAAAGTGTAGTTATTAAA ATAAACTTAGTCTGTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
prel-RB | 1646 | prel-RB | 82..1602 | 1..1521 | 7605 | 100 | Plus |
prel.a | 1649 | prel.a | 82..1605 | 1..1521 | 7550 | 99.8 | Plus |
prel.b | 1531 | prel.b | 294..1531 | 281..1518 | 6190 | 100 | Plus |
prel.b | 1531 | prel.b | 46..293 | 1..245 | 1170 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5312750..5313611 | 657..1518 | 4265 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 5312041..5312419 | 279..657 | 1880 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 5311620..5311771 | 1..152 | 760 | 100 | Plus |
chr2R | 21145070 | chr2R | 5311834..5311964 | 150..280 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9425246..9426110 | 657..1521 | 4325 | 100 | Plus |
2R | 25286936 | 2R | 9424537..9424915 | 279..657 | 1895 | 100 | Plus |
2R | 25286936 | 2R | 9424116..9424267 | 1..152 | 760 | 100 | Plus |
2R | 25286936 | 2R | 9424330..9424460 | 150..280 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9426445..9427309 | 657..1521 | 4325 | 100 | Plus |
2R | 25260384 | 2R | 9425736..9426114 | 279..657 | 1895 | 100 | Plus |
2R | 25260384 | 2R | 9425315..9425466 | 1..152 | 760 | 100 | Plus |
2R | 25260384 | 2R | 9425529..9425659 | 150..280 | 655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5311620..5311770 | 1..151 | 100 | -> | Plus |
chr2R | 5311836..5311964 | 152..280 | 100 | -> | Plus |
chr2R | 5312043..5312419 | 281..657 | 99 | -> | Plus |
chr2R | 5312751..5313611 | 658..1518 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 1..711 | 343..1053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 1..711 | 343..1053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RC | 1..711 | 343..1053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RA | 1..711 | 343..1053 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RC | 1..711 | 343..1053 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 46..1563 | 1..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 46..1563 | 1..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 30..1547 | 1..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RA | 46..1563 | 1..1518 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prel-RB | 30..1547 | 1..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9424332..9424460 | 152..280 | 100 | -> | Plus |
2R | 9424116..9424266 | 1..151 | 100 | -> | Plus |
2R | 9424539..9424915 | 281..657 | 100 | -> | Plus |
2R | 9425247..9426107 | 658..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9424332..9424460 | 152..280 | 100 | -> | Plus |
2R | 9424116..9424266 | 1..151 | 100 | -> | Plus |
2R | 9424539..9424915 | 281..657 | 100 | -> | Plus |
2R | 9425247..9426107 | 658..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9424332..9424460 | 152..280 | 100 | -> | Plus |
2R | 9424116..9424266 | 1..151 | 100 | -> | Plus |
2R | 9424539..9424915 | 281..657 | 100 | -> | Plus |
2R | 9425247..9426107 | 658..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5311621..5311771 | 1..151 | 100 | -> | Plus |
arm_2R | 5311837..5311965 | 152..280 | 100 | -> | Plus |
arm_2R | 5312044..5312420 | 281..657 | 100 | -> | Plus |
arm_2R | 5312752..5313612 | 658..1518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9425738..9426114 | 281..657 | 100 | -> | Plus |
2R | 9426446..9427306 | 658..1518 | 100 | Plus | |
2R | 9425315..9425465 | 1..151 | 100 | -> | Plus |
2R | 9425531..9425659 | 152..280 | 100 | -> | Plus |
Translation from 342 to 1052
> LD36516.pep MVVAASTCRTETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDG KLFSRRLLSKTNPVPKWGARFYNNVPVKIVEDSVLDPVKKTFTTFTRNLG MTKIMKVDEIVVYSEQKDGSTLAVRRAYISSQVFGFSRAIRAFGIERFKA NGNKASNGFNYVLRRMFPDSLVGGGHHQHAVTTTSPAGELPATTITVSTT NGSLNNQGALKSAAKVGYEFFKSHASKIAQLFSVKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12463-PA | 236 | GF12463-PA | 1..236 | 1..236 | 1044 | 84.8 | Plus |
Dana\GF15409-PA | 222 | GF15409-PA | 6..162 | 10..163 | 180 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24072-PA | 236 | GG24072-PA | 1..236 | 1..236 | 1160 | 94.5 | Plus |
Dere\GG10142-PA | 215 | GG10142-PA | 6..162 | 10..163 | 177 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23146-PA | 231 | GH23146-PA | 1..231 | 1..236 | 955 | 77.5 | Plus |
Dgri\GH10939-PA | 219 | GH10939-PA | 6..162 | 10..163 | 173 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
prel-PB | 236 | CG8806-PB | 1..236 | 1..236 | 1217 | 100 | Plus |
prel-PC | 236 | CG8806-PC | 1..236 | 1..236 | 1217 | 100 | Plus |
slmo-PE | 215 | CG9131-PE | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PD | 215 | CG9131-PD | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PC | 215 | CG9131-PC | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PB | 215 | CG9131-PB | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PA | 215 | CG9131-PA | 6..162 | 10..163 | 173 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18483-PA | 238 | GI18483-PA | 1..238 | 1..236 | 962 | 76.9 | Plus |
Dmoj\GI13532-PA | 219 | GI13532-PA | 6..162 | 10..163 | 174 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11074-PA | 236 | GL11074-PA | 1..236 | 1..236 | 937 | 74.6 | Plus |
Dper\GL19083-PA | 219 | GL19083-PA | 6..162 | 10..163 | 170 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21334-PA | 236 | GA21334-PA | 1..236 | 1..236 | 937 | 74.6 | Plus |
Dpse\GA21566-PA | 219 | GA21566-PA | 6..162 | 10..163 | 170 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21121-PA | 236 | GM21121-PA | 1..236 | 1..236 | 1239 | 98.3 | Plus |
Dsec\GM17966-PA | 215 | GM17966-PA | 6..162 | 10..163 | 177 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10654-PA | 188 | GD10654-PA | 1..188 | 1..236 | 929 | 78.4 | Plus |
Dsim\GD22604-PA | 215 | GD22604-PA | 6..162 | 10..163 | 177 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21344-PA | 231 | GJ21344-PA | 1..231 | 1..236 | 949 | 79.3 | Plus |
Dvir\GJ12173-PA | 219 | GJ12173-PA | 6..162 | 10..163 | 172 | 25.5 | Plus |
Translation from 342 to 1052
> LD36516.hyp MVVAASTCRTETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDG KLFSRRLLSKTNPVPKWGARFYNNVPVKIVEDSVLDPVKKTFTTFTRNLG MTKIMKVDEIVVYSEQKDGSTLAVRRAYISSQVFGFSRAIRAFGIERFKA NGNKASNGFNYVLRRMFPDSLVGGGHHQHAVTTTSPAGELPATTITVSTT NGSLNNQGALKSAAKVGYEFFKSHASKIAQLFSVKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
prel-PB | 236 | CG8806-PB | 1..236 | 1..236 | 1217 | 100 | Plus |
prel-PC | 236 | CG8806-PC | 1..236 | 1..236 | 1217 | 100 | Plus |
slmo-PE | 215 | CG9131-PE | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PD | 215 | CG9131-PD | 6..162 | 10..163 | 173 | 26.1 | Plus |
slmo-PC | 215 | CG9131-PC | 6..162 | 10..163 | 173 | 26.1 | Plus |