BDGP Sequence Production Resources |
Search the DGRC for LD36721
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 367 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1275-RA |
Protein status: | LD36721.pep: gold |
Preliminary Size: | 1752 |
Sequenced Size: | 1705 |
Gene | Date | Evidence |
---|---|---|
CG1275 | 2001-01-01 | Release 2 assignment |
CG1275 | 2001-09-19 | Blastp of sequenced clone |
CG1275 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1275 | 2008-04-29 | Release 5.5 accounting |
CG1275 | 2008-08-15 | Release 5.9 accounting |
CG1275 | 2008-12-18 | 5.12 accounting |
1705 bp (1705 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058661
> LD36721.complete AAATCGAAGCGGTTAACAGATCGAGTTACAGTTTAAAACCCTTTGATAGT GAAAGTTTGACCGTGTCCTTGACTTGCTGTACTAAATTAAGTATCAATGA ATGTGCCGCTTTAAGTTTAACTTGTTAATAATAATGCTGACGTAGTAAAT TCGCACAGCATTCCGCTCTCTTATGCTGCCAAATTATCTCTTTGTGTTTG TGCCGTTTCTGTTTGTGTTCTTGCCTCTTCCGTTGAAGACATTTTGGAAA TATTCCAAACAAAACACATTATTGGATTACTGATTCATTTCAAATCTTGC ACAGACCATGTCGAAGGACGCGGACGTGGAGCAGGCGACCAAGCCGGAGA GCGGAGTTGTCCAGGTGGAGCCAGCGATTCCGGAGCAGCCACAGGCCGCC GTTCCGACCACCATCTCCACGGCGACCACAGTGATCGCGGTGACTAATGG GGAAAAGCCAGCGGCAGCGACACCAGCAACAACTGCAACACCTGCGACAG CAGAACAAGTGCAACCTGCAACAACCATCGCTGGCATTGAGTTGGCCACT CCAACGGCGGCGGCAACTTCACCACCAACAGGCAGCGGCAAGGCCAACAT GGATCCAGCGCTGATCAACTTTAAGGTGCTCTATGTGCTCACCCAGCTGT GCGGCCTGACCATGATCGTCCTGGTGGCCACCTGGATTGGCCAGCACTTC GGCGGTCTGGCCGGCACCTCAAATCCCGGCGTGGAGTTCAACTGGCATCC GCTGTTCATGACCATTGGCTTCATTTACCTGTATGGCAACTCCATTCTGA TCTATCGTGGTTTCCGCACCACGCGCAAGAAGACTCTGAAGCTTACCCAC GCCGGCATCCACATGGGTGCATTCATTCTGACGGTGATTGCCCTGAAGAC GGTCTTCGATTCCCACAACTTGGCCAATCCGCCCATTCCCAACATGTACT CCCTGCACTCTTGGCTGGGGCTCTCCGCGGTGATCGTCTTCTCGCTGCAG TATGTGGCCGGATTTGTGGCCTTTTTGGCGCCGGGGTTGAGGGAGAACTA CAGGATCGCCATGATGCCGCTGCACATCTACTTCGGACTCTTTGGATTCG TTCTGGCTATTGCTAGTGCCCTGATGGGCATAACCGAGAAGGCCATCTTC GCCATCAAAACTCCGGCTTACTCCACTCTTCCACCGGCTGGTGTGTTGGC CAATGTGATTGGAGTAATGTACGTGGTCTTCGGGGCGCTGGTTGTCTACC TAGCCACTGAGCCCTCCTACAAGCGGAAGCCCATTCCCGAGGACACGGCT CTGCTGAACTCCAGTTCTGTCAACGAGTAAGGGCTATGCCCATGCCCCAA ATCAACTGCAATGCTTACTTAAGCTAAAAACTGTGCACAAAACCAAACGA AACCGAACCTGATCACACGGATGGTGCTTTCTTAGTGATGGAGATGGAGA TTCGTCAAGATGAGTGTATTATCTGTAGCATGTACATAACCTAACGACTA TGTATGACTCTGAATTATGAACATACGTATACTTTGGTCACCAGTTGTGC AATGATTTCAGCGAGTGCTCAAATCATAACGTATTTAACCTCAAGAAAAA CATTTGCTTTGAACTGTACGAATACATCTATATATGTGTGTTATATATGC TTAAATAAATATATATATATATATATATCTATTAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1275-RB | 1779 | CG1275-RB | 97..1779 | 1..1683 | 8415 | 100 | Plus |
CG1275.c | 1808 | CG1275.c | 434..1808 | 317..1691 | 6860 | 99.9 | Plus |
CG1275.a | 1735 | CG1275.a | 361..1735 | 317..1691 | 6860 | 99.9 | Plus |
CG1275.c | 1808 | CG1275.c | 137..433 | 1..297 | 1485 | 100 | Plus |
CG1275.a | 1735 | CG1275.a | 64..360 | 1..297 | 1485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2252143..2252670 | 1683..1156 | 2610 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 2252728..2253091 | 1155..792 | 1790 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 2256514..2256810 | 297..1 | 1470 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 2254940..2255224 | 582..298 | 1425 | 100 | Minus |
chr3L | 24539361 | chr3L | 2253176..2253388 | 791..579 | 1035 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2252736..2253271 | 1691..1156 | 2665 | 99.8 | Minus |
3L | 28110227 | 3L | 2253329..2253692 | 1155..792 | 1820 | 100 | Minus |
3L | 28110227 | 3L | 2257112..2257408 | 297..1 | 1485 | 100 | Minus |
3L | 28110227 | 3L | 2255538..2255822 | 582..298 | 1425 | 100 | Minus |
3L | 28110227 | 3L | 2253777..2253989 | 791..579 | 1065 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2252736..2253271 | 1691..1156 | 2665 | 99.8 | Minus |
3L | 28103327 | 3L | 2253329..2253692 | 1155..792 | 1820 | 100 | Minus |
3L | 28103327 | 3L | 2257112..2257408 | 297..1 | 1485 | 100 | Minus |
3L | 28103327 | 3L | 2255538..2255822 | 582..298 | 1425 | 100 | Minus |
3L | 28103327 | 3L | 2253777..2253989 | 791..579 | 1065 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-C | 11124 | TART-C TARTC 11124bp | 9338..9467 | 406..530 | 126 | 61.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7902..8023 | 414..530 | 122 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2949..2989 | 459..499 | 115 | 75.6 | Plus |
X-element | 4740 | X-element ROXELEMENT 4740bp | 2188..2231 | 233..276 | 112 | 72.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2253176..2253385 | 582..791 | 99 | <- | Minus |
chr3L | 2252205..2252670 | 1156..1621 | 99 | <- | Minus |
chr3L | 2252728..2253091 | 792..1155 | 99 | <- | Minus |
chr3L | 2254941..2255224 | 298..581 | 100 | <- | Minus |
chr3L | 2256514..2256809 | 1..297 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RA | 1..1023 | 308..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RA | 1..1023 | 308..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 1..1023 | 308..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RA | 1..1023 | 308..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 1..1023 | 308..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 2..1666 | 1..1665 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 2..1684 | 1..1683 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 16..1698 | 1..1683 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 2..1666 | 1..1665 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RB | 16..1698 | 1..1683 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252744..2253271 | 1156..1683 | 100 | <- | Minus |
3L | 2253329..2253692 | 792..1155 | 100 | <- | Minus |
3L | 2253777..2253986 | 582..791 | 100 | <- | Minus |
3L | 2255539..2255822 | 298..581 | 100 | <- | Minus |
3L | 2257112..2257408 | 1..297 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252744..2253271 | 1156..1683 | 100 | <- | Minus |
3L | 2253329..2253692 | 792..1155 | 100 | <- | Minus |
3L | 2253777..2253986 | 582..791 | 100 | <- | Minus |
3L | 2255539..2255822 | 298..581 | 100 | <- | Minus |
3L | 2257112..2257408 | 1..297 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252744..2253271 | 1156..1683 | 100 | <- | Minus |
3L | 2253329..2253692 | 792..1155 | 100 | <- | Minus |
3L | 2253777..2253986 | 582..791 | 100 | <- | Minus |
3L | 2255539..2255822 | 298..581 | 100 | <- | Minus |
3L | 2257112..2257408 | 1..297 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2252744..2253271 | 1156..1683 | 100 | <- | Minus |
arm_3L | 2253329..2253692 | 792..1155 | 100 | <- | Minus |
arm_3L | 2253777..2253986 | 582..791 | 100 | <- | Minus |
arm_3L | 2255539..2255822 | 298..581 | 100 | <- | Minus |
arm_3L | 2257112..2257408 | 1..297 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252744..2253271 | 1156..1683 | 100 | <- | Minus |
3L | 2253329..2253692 | 792..1155 | 100 | <- | Minus |
3L | 2253777..2253986 | 582..791 | 100 | <- | Minus |
3L | 2255539..2255822 | 298..581 | 100 | <- | Minus |
3L | 2257112..2257408 | 1..297 | 100 | Minus |
Translation from 307 to 1329
> LD36721.pep MSKDADVEQATKPESGVVQVEPAIPEQPQAAVPTTISTATTVIAVTNGEK PAAATPATTATPATAEQVQPATTIAGIELATPTAAATSPPTGSGKANMDP ALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLF MTIGFIYLYGNSILIYRGFRTTRKKTLKLTHAGIHMGAFILTVIALKTVF DSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGFVAFLAPGLRENYRI AMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGVLANV IGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSSSVNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24874-PA | 336 | GF24874-PA | 1..336 | 1..340 | 1383 | 80 | Plus |
Dana\GF11463-PA | 290 | GF11463-PA | 35..271 | 89..314 | 293 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14525-PA | 254 | GG14525-PA | 6..254 | 92..340 | 1292 | 98 | Plus |
Dere\GG22561-PA | 290 | GG22561-PA | 27..233 | 81..278 | 286 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16482-PA | 342 | GH16482-PA | 1..342 | 1..340 | 1144 | 66.9 | Plus |
Dgri\GH19961-PA | 287 | GH19961-PA | 24..241 | 81..289 | 316 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1275-PA | 340 | CG1275-PA | 1..340 | 1..340 | 1731 | 100 | Plus |
CG1275-PB | 340 | CG1275-PB | 1..340 | 1..340 | 1731 | 100 | Plus |
CG1275-PC | 254 | CG1275-PC | 6..254 | 92..340 | 1284 | 100 | Plus |
CG1275-PD | 243 | CG1275-PD | 1..243 | 98..340 | 1253 | 100 | Plus |
nemy-PA | 290 | CG8776-PA | 27..271 | 81..314 | 290 | 31.6 | Plus |
nemy-PL | 256 | CG8776-PL | 25..237 | 105..314 | 281 | 33.6 | Plus |
nemy-PK | 266 | CG8776-PK | 35..247 | 105..314 | 281 | 33.6 | Plus |
nemy-PB | 267 | CG8776-PB | 35..248 | 105..314 | 281 | 33.3 | Plus |
nemy-PG | 267 | CG8776-PG | 35..248 | 105..314 | 281 | 33.3 | Plus |
nemy-PE | 267 | CG8776-PE | 35..248 | 105..314 | 281 | 33.3 | Plus |
nemy-PM | 209 | CG8776-PM | 6..190 | 133..314 | 261 | 36.4 | Plus |
nemy-PC | 210 | CG8776-PC | 6..191 | 133..314 | 261 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12153-PA | 336 | GI12153-PA | 1..333 | 1..336 | 1186 | 68.9 | Plus |
Dmoj\GI19919-PA | 286 | GI19919-PA | 23..240 | 81..289 | 323 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24623-PA | 332 | GL24623-PA | 1..325 | 1..316 | 1176 | 73.7 | Plus |
Dper\GL17735-PA | 291 | GL17735-PA | 28..234 | 81..278 | 288 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11787-PA | 349 | GA11787-PA | 1..349 | 1..340 | 1292 | 74.6 | Plus |
Dpse\GA21312-PA | 291 | GA21312-PA | 28..234 | 81..278 | 290 | 34.6 | Plus |
Dpse\GA21312-PB | 267 | GA21312-PB | 56..210 | 126..278 | 273 | 40.8 | Plus |
Dpse\GA21312-PC | 210 | GA21312-PC | 6..153 | 133..278 | 266 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14130-PA | 254 | GM14130-PA | 6..254 | 92..340 | 1298 | 98.4 | Plus |
Dsec\GM20344-PA | 290 | GM20344-PA | 27..233 | 81..278 | 288 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13402-PA | 340 | GD13402-PA | 1..340 | 1..340 | 1702 | 96.5 | Plus |
Dsim\GD13398-PA | 243 | GD13398-PA | 1..243 | 98..340 | 1264 | 98.4 | Plus |
Dsim\GD25823-PA | 290 | GD25823-PA | 27..233 | 81..278 | 288 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13433-PA | 338 | GJ13433-PA | 1..338 | 1..340 | 1144 | 67 | Plus |
Dvir\GJ15086-PA | 287 | GJ15086-PA | 24..268 | 81..314 | 319 | 34.4 | Plus |
Translation from 307 to 1329
> LD36721.hyp MSKDADVEQATKPESGVVQVEPAIPEQPQAAVPTTISTATTVIAVTNGEK PAAATPATTATPATAEQVQPATTIAGIELATPTAAATSPPTGSGKANMDP ALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAGTSNPGVEFNWHPLF MTIGFIYLYGNSILIYRGFRTTRKKTLKLTHAGIHMGAFILTVIALKTVF DSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGFVAFLAPGLRENYRI AMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTPAYSTLPPAGVLANV IGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSSSVNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1275-PA | 340 | CG1275-PA | 1..340 | 1..340 | 1731 | 100 | Plus |
CG1275-PB | 340 | CG1275-PB | 1..340 | 1..340 | 1731 | 100 | Plus |
CG1275-PC | 254 | CG1275-PC | 6..254 | 92..340 | 1284 | 100 | Plus |
CG1275-PD | 243 | CG1275-PD | 1..243 | 98..340 | 1253 | 100 | Plus |
nemy-PA | 290 | CG8776-PA | 27..271 | 81..314 | 290 | 31.6 | Plus |