BDGP Sequence Production Resources |
Search the DGRC for LD36812
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 368 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | nct-RA |
Protein status: | LD36812.pep: gold |
Preliminary Size: | 2454 |
Sequenced Size: | 2424 |
Gene | Date | Evidence |
---|---|---|
CG7012 | 2001-01-01 | Release 2 assignment |
CG7012 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7012 | 2003-01-14 | Blastp of sequenced clone |
nct | 2008-04-29 | Release 5.5 accounting |
nct | 2008-08-15 | Release 5.9 accounting |
nct | 2008-12-18 | 5.12 accounting |
2424 bp (2424 high quality bases) assembled on 2003-01-14
GenBank Submission: BT003245
> LD36812.complete ACGCAACACTGCAATTTCTGGACGCGATTTCGTGGGAATCTTCGATGGAA ATGCGTCTGAATGCGGCTTCCATATGGCTGTTAATACTGTCGTATGGAGC AACTATTGCTCAAGGAGAAAGAACCCGCGATAAGATGTACGAGCCCATTG GAGGAGCTAGCTGTTTCCGACGGCTGAATGGCACCCATCAGACAGGCTGT TCCTCAACCTACTCCGGTTCCGTGGGCGTACTACATCTAATAAACGTCGA GGCCGACCTGGAATTTCTTCTTAGCAGCCCACCATCTCCACCTTACGCCC CCATGATACCACCTCACCTGTTCACACGTAACAACCTGATGCGCCTAAAG GAAGCCGGACCAAAGAACATTTCTGTGGTGCTGCTGATCAACCGCACGAA CCAGATGAAGCAGTTCTCGCACGAACTCAACTGCCCCAATCAGTACAGCG GCCTGAACAGCACCAGTGAGACCTGCGACGCCAGCAATCCAGCCAAAAAC TGGAATCCCTGGGGCACTGGACTTCTGCACGAGGACTTTCCCTTTCCTAT CTATTACATAGCCGATTTGGATCAGGTCACCAAGCTAGAGAAGTGCTTTC AGGACTTTAACAACCATAACTACGAGACGCACGCGCTGCGTAGCTTGTGC GCCGTCGAGGTCAAGTCCTTTATGTCCGCCGCTGTCAACACCGAGGTCTG TATGCGCCGCACCAACTTCATCAATAATCTTGGAGGAAGCAAGTACTGCG ATCCGCTCGAGGGACGGAATGTTTACGCCACCTTGTACCCCCGAAAGCCA GCAATCGAAAACAACTTGGAGACAGTCCATACGAATGAAAAGTTCATATT AGTAACCTGTCGCCTGGACACCACCACCATGTTCGATGGCGTCGGTCTTG GAGCCATGGACTCCCTCATGGGATTTGCTGTTTTCACTCATGTGGCGTAT CTATTAAAACAACTACTTCCGCCGCAAAGCAAAGACCTTCATAATGTCCT CTTTGTGACTTTTAATGGCGAATCCTATGACTACATTGGTTCTCAAAGAT TTGTATACGACATGGAGAAACTTCAATTTCCTACTGAATCCACAGGCACG CCTCCGATTGCCTTTGACAATATTGACTTCATGCTGGACATCGGGACACT GGATGACATATCGAATATTAAGCTGCATGCGTTAAATGGAACGACTTTGG CTCAGCAAATTCTAGAGCGGCTAAATAACTATGCGAAGTCGCCACGCTAT GGCTTTAACCTGAACATTCAGTCCGAGATGAGCGCTCACTTACCACCTAC GTCGGCGCAATCATTTCTGCGACGTGATCCAAACTTCAATGCATTGATTC TAAACGCTCGTCCAACGAACAAGTATTATCATTCCATATACGATGACGCG GATAACGTGGACTTCACCTATGCGAACACAAGCAAGGATTTCACCCAGCT GACGGAAGTTAATGACTTTAAAAGCTTGAACCCAGATTCACTGCAAATGA AAGTGCGCAACGTTTCCTCTATTGTGGCCATGGCCCTATATCAGACAATA ACTGGAAAGGAGTACACTGGCACCAAGGTGGCCAACCCTCTGATGGCAGA TGAGTTCCTTTACTGTTTCCTGCAATCGGCGGACTGCCCACTCTTTAAGG CCGCATCTTATCCGGGCAGTCAGCTCACCAATTTGCCTCCGATGCGCTAC ATAAGCGTCTTGGGTGGCTCTCAAGAGTCGTCGGGCTATACGTATAGATT GCTGGGCTATCTCCTGTCACAACTGCAGCCAGACATTCACAGAGATAACT GCACCGACTTGCCGCTGCACTATTTCGCCGGATTCAACAATATCGGAGAG TGTCGCCTCACCACGCAGAACTACAGTCACGCCCTGAGTCCAGCTTTTCT TATTGATGGCTACGATTGGAGTTCCGGCATGTATTCCACTTGGACTGAAT CCACCTGGTCACAGTTCAGTGCACGCATCTTCCTGCGCCCGTCCAATGTG CACCAGGTCACAACTCTAAGCGTTGGCATAGTGGTGCTGATAATATCCTT CTGTTTGGTGTATATAATCAGCTCACGATCGGAAGTCCTCTTTGAGGATT TGCCGGCAAGCAATGCCGCATTATTTGGTTGATGTCACAACTGCCACAGC GACGAAATCATCGCGTTCAGCAGCTCATTCCATAGATTTCTGCATGCATC GCCGCGGCCGACAGCCTGTTAAATCTTCAAAGAATATCTGATCACGTGCC GAAGATGATTGGTTGCTGAATATGATCTAAAACAAAAAACAGACTTAACA AAGACACTAAAATGATATTCTAACTCGTCTTATTTAAAACATTAAGCAAA CGTTTATTTATATGTATTTTTGTATTTTAAAGTAGTAAATTAGCTTCTAT CAACTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nct-RA | 2909 | nct-RA | 66..2471 | 1..2406 | 12030 | 100 | Plus |
nct.c | 3079 | nct.c | 66..2262 | 1..2197 | 10985 | 100 | Plus |
nct-RC | 2968 | nct-RC | 66..2262 | 1..2197 | 10985 | 100 | Plus |
nct.c | 3079 | nct.c | 2322..2530 | 2198..2406 | 1045 | 100 | Plus |
nct-RC | 2968 | nct-RC | 2322..2530 | 2198..2406 | 1045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20675923..20676725 | 894..1696 | 4015 | 100 | Plus |
chr3R | 27901430 | chr3R | 20675172..20675863 | 205..896 | 3460 | 100 | Plus |
chr3R | 27901430 | chr3R | 20676788..20677001 | 1696..1909 | 1055 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 20677061..20677272 | 1908..2119 | 1030 | 99.1 | Plus |
chr3R | 27901430 | chr3R | 20677548..20677755 | 2198..2405 | 1025 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 20674791..20674898 | 1..108 | 540 | 100 | Plus |
chr3R | 27901430 | chr3R | 20675023..20675119 | 108..204 | 470 | 99 | Plus |
chr3R | 27901430 | chr3R | 20677411..20677488 | 2120..2197 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24852737..24853539 | 894..1696 | 4015 | 100 | Plus |
3R | 32079331 | 3R | 24851986..24852677 | 205..896 | 3460 | 100 | Plus |
3R | 32079331 | 3R | 24853602..24853815 | 1696..1909 | 1070 | 100 | Plus |
3R | 32079331 | 3R | 24853875..24854086 | 1908..2119 | 1060 | 100 | Plus |
3R | 32079331 | 3R | 24854362..24854570 | 2198..2406 | 1045 | 100 | Plus |
3R | 32079331 | 3R | 24851605..24851712 | 1..108 | 540 | 100 | Plus |
3R | 32079331 | 3R | 24851837..24851933 | 108..204 | 485 | 100 | Plus |
3R | 32079331 | 3R | 24854225..24854302 | 2120..2197 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24593568..24594370 | 894..1696 | 4015 | 100 | Plus |
3R | 31820162 | 3R | 24592817..24593508 | 205..896 | 3460 | 100 | Plus |
3R | 31820162 | 3R | 24594433..24594646 | 1696..1909 | 1070 | 100 | Plus |
3R | 31820162 | 3R | 24594706..24594917 | 1908..2119 | 1060 | 100 | Plus |
3R | 31820162 | 3R | 24595193..24595401 | 2198..2406 | 1045 | 100 | Plus |
3R | 31820162 | 3R | 24592436..24592543 | 1..108 | 540 | 100 | Plus |
3R | 31820162 | 3R | 24592668..24592764 | 108..204 | 485 | 100 | Plus |
3R | 31820162 | 3R | 24595056..24595133 | 2120..2197 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6411..6470 | 2328..2389 | 116 | 67.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20675024..20675119 | 109..204 | 98 | -> | Plus |
chr3R | 20674791..20674898 | 1..108 | 100 | -> | Plus |
chr3R | 20675172..20675861 | 205..894 | 100 | -> | Plus |
chr3R | 20675924..20676725 | 895..1696 | 100 | -> | Plus |
chr3R | 20676789..20677000 | 1697..1908 | 99 | -> | Plus |
chr3R | 20677062..20677272 | 1909..2119 | 99 | -> | Plus |
chr3R | 20677411..20677488 | 2120..2197 | 100 | -> | Plus |
chr3R | 20677548..20677755 | 2198..2405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 1..2088 | 45..2132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RC | 1..2088 | 45..2132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 1..2088 | 45..2132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 1..2088 | 45..2132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 1..2088 | 45..2132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 19..2423 | 1..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 34..2438 | 1..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 5..2409 | 1..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 19..2423 | 1..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nct-RA | 5..2409 | 1..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24854362..24854569 | 2198..2405 | 100 | Plus | |
3R | 24851605..24851712 | 1..108 | 100 | -> | Plus |
3R | 24851838..24851933 | 109..204 | 100 | -> | Plus |
3R | 24851986..24852675 | 205..894 | 100 | -> | Plus |
3R | 24852738..24853539 | 895..1696 | 100 | -> | Plus |
3R | 24853603..24853814 | 1697..1908 | 100 | -> | Plus |
3R | 24853876..24854086 | 1909..2119 | 100 | -> | Plus |
3R | 24854225..24854302 | 2120..2197 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24854362..24854569 | 2198..2405 | 100 | Plus | |
3R | 24851605..24851712 | 1..108 | 100 | -> | Plus |
3R | 24851838..24851933 | 109..204 | 100 | -> | Plus |
3R | 24851986..24852675 | 205..894 | 100 | -> | Plus |
3R | 24852738..24853539 | 895..1696 | 100 | -> | Plus |
3R | 24853603..24853814 | 1697..1908 | 100 | -> | Plus |
3R | 24853876..24854086 | 1909..2119 | 100 | -> | Plus |
3R | 24854225..24854302 | 2120..2197 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24854362..24854569 | 2198..2405 | 100 | Plus | |
3R | 24851605..24851712 | 1..108 | 100 | -> | Plus |
3R | 24851838..24851933 | 109..204 | 100 | -> | Plus |
3R | 24851986..24852675 | 205..894 | 100 | -> | Plus |
3R | 24852738..24853539 | 895..1696 | 100 | -> | Plus |
3R | 24853603..24853814 | 1697..1908 | 100 | -> | Plus |
3R | 24853876..24854086 | 1909..2119 | 100 | -> | Plus |
3R | 24854225..24854302 | 2120..2197 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20677327..20677434 | 1..108 | 100 | -> | Plus |
arm_3R | 20677560..20677655 | 109..204 | 100 | -> | Plus |
arm_3R | 20677708..20678397 | 205..894 | 100 | -> | Plus |
arm_3R | 20678460..20679261 | 895..1696 | 100 | -> | Plus |
arm_3R | 20679325..20679536 | 1697..1908 | 100 | -> | Plus |
arm_3R | 20679598..20679808 | 1909..2119 | 100 | -> | Plus |
arm_3R | 20679947..20680024 | 2120..2197 | 100 | -> | Plus |
arm_3R | 20680084..20680291 | 2198..2405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24592817..24593506 | 205..894 | 100 | -> | Plus |
3R | 24593569..24594370 | 895..1696 | 100 | -> | Plus |
3R | 24594434..24594645 | 1697..1908 | 100 | -> | Plus |
3R | 24594707..24594917 | 1909..2119 | 100 | -> | Plus |
3R | 24595056..24595133 | 2120..2197 | 100 | -> | Plus |
3R | 24595193..24595400 | 2198..2405 | 100 | Plus | |
3R | 24592436..24592543 | 1..108 | 100 | -> | Plus |
3R | 24592669..24592764 | 109..204 | 100 | -> | Plus |
Translation from 2 to 2131
> LD36812.hyp ATLQFLDAISWESSMEMRLNAASIWLLILSYGATIAQGERTRDKMYEPIG GASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPPYAP MIPPHLFTRNNLMRLKEAGPKNISVVLLINRTNQMKQFSHELNCPNQYSG LNSTSETCDASNPAKNWNPWGTGLLHEDFPFPIYYIADLDQVTKLEKCFQ DFNNHNYETHALRSLCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCD PLEGRNVYATLYPRKPAIENNLETVHTNEKFILVTCRLDTTTMFDGVGLG AMDSLMGFAVFTHVAYLLKQLLPPQSKDLHNVLFVTFNGESYDYIGSQRF VYDMEKLQFPTESTGTPPIAFDNIDFMLDIGTLDDISNIKLHALNGTTLA QQILERLNNYAKSPRYGFNLNIQSEMSAHLPPTSAQSFLRRDPNFNALIL NARPTNKYYHSIYDDADNVDFTYANTSKDFTQLTEVNDFKSLNPDSLQMK VRNVSSIVAMALYQTITGKEYTGTKVANPLMADEFLYCFLQSADCPLFKA ASYPGSQLTNLPPMRYISVLGGSQESSGYTYRLLGYLLSQLQPDIHRDNC TDLPLHYFAGFNNIGECRLTTQNYSHALSPAFLIDGYDWSSGMYSTWTES TWSQFSARIFLRPSNVHQVTTLSVGIVVLIISFCLVYIISSRSEVLFEDL PASNAALFG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nct-PC | 695 | CG7012-PC | 1..695 | 15..709 | 3673 | 100 | Plus |
nct-PA | 695 | CG7012-PA | 1..695 | 15..709 | 3673 | 100 | Plus |
nct-PE | 699 | CG7012-PE | 1..692 | 15..706 | 3657 | 100 | Plus |
nct-PD | 692 | CG7012-PD | 1..692 | 15..706 | 3657 | 100 | Plus |
Translation from 44 to 2131
> LD36812.pep MEMRLNAASIWLLILSYGATIAQGERTRDKMYEPIGGASCFRRLNGTHQT GCSSTYSGSVGVLHLINVEADLEFLLSSPPSPPYAPMIPPHLFTRNNLMR LKEAGPKNISVVLLINRTNQMKQFSHELNCPNQYSGLNSTSETCDASNPA KNWNPWGTGLLHEDFPFPIYYIADLDQVTKLEKCFQDFNNHNYETHALRS LCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPR KPAIENNLETVHTNEKFILVTCRLDTTTMFDGVGLGAMDSLMGFAVFTHV AYLLKQLLPPQSKDLHNVLFVTFNGESYDYIGSQRFVYDMEKLQFPTEST GTPPIAFDNIDFMLDIGTLDDISNIKLHALNGTTLAQQILERLNNYAKSP RYGFNLNIQSEMSAHLPPTSAQSFLRRDPNFNALILNARPTNKYYHSIYD DADNVDFTYANTSKDFTQLTEVNDFKSLNPDSLQMKVRNVSSIVAMALYQ TITGKEYTGTKVANPLMADEFLYCFLQSADCPLFKAASYPGSQLTNLPPM RYISVLGGSQESSGYTYRLLGYLLSQLQPDIHRDNCTDLPLHYFAGFNNI GECRLTTQNYSHALSPAFLIDGYDWSSGMYSTWTESTWSQFSARIFLRPS NVHQVTTLSVGIVVLIISFCLVYIISSRSEVLFEDLPASNAALFG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16997-PA | 693 | GF16997-PA | 3..693 | 6..695 | 3068 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11327-PA | 698 | GG11327-PA | 1..698 | 1..695 | 3613 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19598-PA | 702 | GH19598-PA | 1..702 | 1..692 | 2659 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nct-PC | 695 | CG7012-PC | 1..695 | 1..695 | 3673 | 100 | Plus |
Nct-PA | 695 | CG7012-PA | 1..695 | 1..695 | 3673 | 100 | Plus |
Nct-PE | 699 | CG7012-PE | 1..692 | 1..692 | 3657 | 100 | Plus |
Nct-PD | 692 | CG7012-PD | 1..692 | 1..692 | 3657 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23992-PA | 711 | GI23992-PA | 1..700 | 1..695 | 2761 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13937-PA | 700 | GL13937-PA | 1..700 | 1..695 | 2926 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20030-PB | 694 | GA20030-PB | 13..694 | 17..693 | 2855 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26636-PA | 695 | GM26636-PA | 1..695 | 1..695 | 3686 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21138-PA | 693 | GD21138-PA | 1..693 | 3..695 | 3700 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23626-PA | 703 | GJ23626-PA | 1..703 | 1..692 | 2683 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22490-PA | 709 | GK22490-PA | 1..709 | 1..695 | 2796 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23523-PA | 695 | GE23523-PA | 1..695 | 3..695 | 3595 | 95.8 | Plus |