BDGP Sequence Production Resources |
Search the DGRC for LD37010
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 370 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | Abi-RA |
Protein status: | LD37010.pep: gold |
Preliminary Size: | 2518 |
Sequenced Size: | 2369 |
Gene | Date | Evidence |
---|---|---|
CG9749 | 2001-01-01 | Release 2 assignment |
CG9749 | 2001-07-04 | Blastp of sequenced clone |
CG9749 | 2003-01-01 | Sim4 clustering to Release 3 |
Abi | 2008-04-29 | Release 5.5 accounting |
Abi | 2008-08-15 | Release 5.9 accounting |
Abi | 2008-12-18 | 5.12 accounting |
2369 bp (2369 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051877
> LD37010.complete GCCAGCGTTCTTTCTTTTTTCACGGAAAATGTAATGAAAAACTGCATTTA ACTGCATTTAAAACGTAGCAACTAGCCCGGAAAAGCATCTGTTGTGCAAT CGCATAGTCAATAAACATCCACACCCATGTTGACCGAAACCCCCATGGCC AGCGAGAACATCATGGACGAACTAGCCTCTCTGATACGCACCGAGATCCC CGATGGCCGCCAGAGTCTGCGGGACAGCTACACGAACCTGGAGCGGGTGG CCGACTACTGCGAGGACACCTACTACCGCGCGGACAACAAGAAGGCGGCC CTGGAGGCCACCAAGAACTACACCACCCAGTCGCTGGCCAGCGTGGCCTA CCAGATTAACACGCTCGCCTATAGCTACATGCAGCTCCTCGAGCTTCAGG CCCAGCAGCTCGGCGAGATGGAGTCCCAGATGAACCACATCGCCCAGACG GTGCATATCCACAAGGAGAAGGTGGCCAGGAGAGAGATTGGCGTGCTTAC GGCTAACAAGGTGAGCTCGCGCCAGTTTAAGATCGTGGCGCCCATCAATC CGGAGAAGCCCATCAAGTATGTGCGCAAGCCCATCGACTACTCGATGTTG GACGAGATTGGCCACGGCATTAACTCGGCCCAGCACTCGCAGGTGCGACA GAAACATCGGGGCTCCAGCCATGGGTCCGTGCAATCCTTATTGCCGCCGT CGGTGGGACCTCCGCCAACCACGAAGCCCCCAACTCCGCCGCAGATGTCG CGAGCTGGGAACACTGGCACACTGGGCAAGTCGGTCAGCAATACCGGGAC ACTGGGCAAGAGTTCGCGGGAGTACCGCACTCCGCCTGTGGTCAATCCAC CACAGGTGCCATCGCACTACGCTCCCAACTATCCTATTGGGCATCCAAAG CGAATGTCGACGGCTTCTTCAACGATGACTACCACCACCACAGGCGGCGG AGCGGCGGGCAATGAACGAGCTGCTGGCTACAGTGCACTTCCGATGCCAC CCAGCCAGCAGATAGCCACACATGTAAACCTGCCCTCCGCGGGCATGATG CAATCGCTGCCACCACCGCCGCCCACTACGTACGACGATCGCAGCAGCAT GCCACCAGCTCCTCCTTCACCACTTACGGTTTCGCAGCACGAGATGACCG AGCAGAGTCACATTGGCATGCACACTTTGGGACGCAATATCAACAGGAAT CACTTCAGCTTGAACTTCGCTCGTCCCGGCTCACAGTCGCCTCCCTTGCC ACCTCCGCCGCCGCCGGAGGATGAGCATCAAGACTTCGGACGACCACGCA CATCGACGGGACCGCAGCTGGCGCCCATAGTGCCCGAGGATCAGAACTTA CCCGGCTGGGTGCCCAAGAACTTCATTGAGAAGGTGGTAGCCATTTACGA CTACTATGCCGACAAGGACGACGAGCTGAGCTTCCAGGAAAGCTCAGTGC TGTACGTGCTCAAGAAAAACGACGACGGCTGGTGGGAGGGCGTCATGGAT GGTGTTACCGGTCTGTTTCCGGGCAACTACGTAGAGCCTTGTGTCTAAGC CTCGCATCGATATTCTAAACATGCCAACCATTACAATAATCTGCATCATC TGGTCTGTTCCAGTCCTCTGCTGCTTCTCAAGAGCTCCAAAAAATTTCAA TTCAGTTATCGGAGAGTTAGACTGAGGACCGCAACAGACTCAGCTGACAA TGACGATAAGATTTTGAGCATATTAATAAGGACAATTATACAATTACACA CCTACACAAGCACAGCAGGCCAGAGAAAGCGAATTCCATTAGCATCAGCC AACCGCATTTAGTCTAATATAAACGAGCACACAAACACACAGAATCCACG GGCTAGGGATACCGCTTGCTGCCCAACTAAAACTATTTACACTTTAGTAG CCGAAAACGATGCAAGAAGGGGAAAGTGAAACCGGATACCCGTGAATAAC TTATGCGATATTATAAAACTGTTCCACAACCGTAGACGAATTCTGTCCTG CTCCTGCCGCCAATCCAAATACTTTAAATATTTGCTCACAGTTTTATCAA GCGATTTCTGTTTGCCTTGCGCTTTGATATGCCCGGCTATTATACACCAA TACTACCCGAACCTATGCCCCCAGCAATACTGTAGGTTATATAAATTTCA GTTAGCATTTAATACTTAAGTATTGGCCAGTTGGAACTTTTGTTTATACT TTTACGAACCGCAACGATGTCTTTTTTTTGCGAACGTTTAGTTAAAATGG AATTGCCAGCAAAGGAATCAAATTAAATTAAACAATACAAGTACACATAC GCTCTATATGGTAAAAATAATAGCTAATAAAAATTTCAATTACTAAACCG CAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Abi-RA | 2428 | Abi-RA | 75..2427 | 1..2353 | 11765 | 100 | Plus |
Abi-RB | 2542 | Abi-RB | 305..2542 | 116..2353 | 11190 | 100 | Plus |
Abi.a | 2307 | Abi.a | 70..2307 | 116..2353 | 11190 | 100 | Plus |
Abi-RB | 2542 | Abi-RB | 25..139 | 1..115 | 575 | 100 | Plus |
Abi.a | 2307 | Abi.a | 40..69 | 1..30 | 150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9944104..9945068 | 2351..1384 | 4640 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 9945687..9946311 | 1105..481 | 3020 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 9946601..9946967 | 482..116 | 1805 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 9945124..9945313 | 1384..1195 | 920 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 9947133..9947246 | 115..2 | 570 | 100 | Minus |
chr3R | 27901430 | chr3R | 9945534..9945625 | 1197..1106 | 445 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14119260..14120229 | 2353..1384 | 4850 | 100 | Minus |
3R | 32079331 | 3R | 14120847..14121471 | 1105..481 | 3125 | 100 | Minus |
3R | 32079331 | 3R | 14121746..14122112 | 482..116 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 14120285..14120474 | 1384..1195 | 950 | 100 | Minus |
3R | 32079331 | 3R | 14122278..14122392 | 115..1 | 575 | 100 | Minus |
3R | 32079331 | 3R | 14120694..14120785 | 1197..1106 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13860091..13861060 | 2353..1384 | 4850 | 100 | Minus |
3R | 31820162 | 3R | 13861678..13862302 | 1105..481 | 3125 | 100 | Minus |
3R | 31820162 | 3R | 13862577..13862943 | 482..116 | 1835 | 100 | Minus |
3R | 31820162 | 3R | 13861116..13861305 | 1384..1195 | 950 | 100 | Minus |
3R | 31820162 | 3R | 13863109..13863223 | 115..1 | 575 | 100 | Minus |
3R | 31820162 | 3R | 13861525..13861616 | 1197..1106 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 886..982 | 1238..1335 | 126 | 65.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9944104..9945067 | 1385..2351 | 98 | <- | Minus |
chr3R | 9945124..9945311 | 1197..1384 | 98 | <- | Minus |
chr3R | 9945535..9945625 | 1106..1196 | 98 | <- | Minus |
chr3R | 9945687..9946309 | 483..1105 | 98 | <- | Minus |
chr3R | 9946601..9946967 | 116..482 | 99 | <- | Minus |
chr3R | 9947133..9947246 | 1..115 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RB | 1..1422 | 127..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RB | 1..1422 | 127..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 1..1422 | 127..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RB | 1..1422 | 127..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 1..1422 | 127..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 29..2379 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 29..2379 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 29..2379 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 29..2379 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abi-RA | 29..2379 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14121746..14122112 | 116..482 | 100 | <- | Minus |
3R | 14122278..14122392 | 1..115 | 100 | Minus | |
3R | 14119262..14120228 | 1385..2351 | 100 | <- | Minus |
3R | 14120285..14120472 | 1197..1384 | 100 | <- | Minus |
3R | 14120695..14120785 | 1106..1196 | 100 | <- | Minus |
3R | 14120847..14121469 | 483..1105 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14121746..14122112 | 116..482 | 100 | <- | Minus |
3R | 14122278..14122392 | 1..115 | 100 | Minus | |
3R | 14119262..14120228 | 1385..2351 | 100 | <- | Minus |
3R | 14120285..14120472 | 1197..1384 | 100 | <- | Minus |
3R | 14120695..14120785 | 1106..1196 | 100 | <- | Minus |
3R | 14120847..14121469 | 483..1105 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14121746..14122112 | 116..482 | 100 | <- | Minus |
3R | 14122278..14122392 | 1..115 | 100 | Minus | |
3R | 14119262..14120228 | 1385..2351 | 100 | <- | Minus |
3R | 14120285..14120472 | 1197..1384 | 100 | <- | Minus |
3R | 14120695..14120785 | 1106..1196 | 100 | <- | Minus |
3R | 14120847..14121469 | 483..1105 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9944984..9945950 | 1385..2351 | 100 | <- | Minus |
arm_3R | 9946007..9946194 | 1197..1384 | 100 | <- | Minus |
arm_3R | 9946417..9946507 | 1106..1196 | 100 | <- | Minus |
arm_3R | 9946569..9947191 | 483..1105 | 100 | <- | Minus |
arm_3R | 9947468..9947834 | 116..482 | 100 | <- | Minus |
arm_3R | 9948000..9948114 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13860093..13861059 | 1385..2351 | 100 | <- | Minus |
3R | 13861116..13861303 | 1197..1384 | 100 | <- | Minus |
3R | 13861526..13861616 | 1106..1196 | 100 | <- | Minus |
3R | 13861678..13862300 | 483..1105 | 100 | <- | Minus |
3R | 13862577..13862943 | 116..482 | 100 | <- | Minus |
3R | 13863109..13863223 | 1..115 | 100 | Minus |
Translation from 126 to 1547
> LD37010.hyp MLTETPMASENIMDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYY RADNKKAALEATKNYTTQSLASVAYQINTLAYSYMQLLELQAQQLGEMES QMNHIAQTVHIHKEKVARREIGVLTANKVSSRQFKIVAPINPEKPIKYVR KPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSLLPPSVGPPPTTK PPTPPQMSRAGNTGTLGKSVSNTGTLGKSSREYRTPPVVNPPQVPSHYAP NYPIGHPKRMSTASSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIATHV NLPSAGMMQSLPPPPPTTYDDRSSMPPAPPSPLTVSQHEMTEQSHIGMHT LGRNINRNHFSLNFARPGSQSPPLPPPPPPEDEHQDFGRPRTSTGPQLAP IVPEDQNLPGWVPKNFIEKVVAIYDYYADKDDELSFQESSVLYVLKKNDD GWWEGVMDGVTGLFPGNYVEPCV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Abi-PF | 473 | CG9749-PF | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PB | 473 | CG9749-PB | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PA | 473 | CG9749-PA | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PD | 477 | CG9749-PD | 1..477 | 1..473 | 2498 | 99.2 | Plus |
Abi-PE | 472 | CG9749-PE | 1..472 | 1..473 | 2497 | 99.8 | Plus |
Translation from 126 to 1547
> LD37010.pep MLTETPMASENIMDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYY RADNKKAALEATKNYTTQSLASVAYQINTLAYSYMQLLELQAQQLGEMES QMNHIAQTVHIHKEKVARREIGVLTANKVSSRQFKIVAPINPEKPIKYVR KPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSLLPPSVGPPPTTK PPTPPQMSRAGNTGTLGKSVSNTGTLGKSSREYRTPPVVNPPQVPSHYAP NYPIGHPKRMSTASSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIATHV NLPSAGMMQSLPPPPPTTYDDRSSMPPAPPSPLTVSQHEMTEQSHIGMHT LGRNINRNHFSLNFARPGSQSPPLPPPPPPEDEHQDFGRPRTSTGPQLAP IVPEDQNLPGWVPKNFIEKVVAIYDYYADKDDELSFQESSVLYVLKKNDD GWWEGVMDGVTGLFPGNYVEPCV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18788-PA | 472 | GF18788-PA | 1..472 | 1..473 | 2448 | 97.5 | Plus |
Dana\GF24142-PA | 1192 | GF24142-PA | 1032..1091 | 414..473 | 171 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21491-PA | 473 | GG21491-PA | 1..473 | 1..473 | 2512 | 99.6 | Plus |
Dere\GG21524-PA | 1102 | GG21524-PA | 1029..1088 | 414..473 | 169 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19698-PA | 460 | GH19698-PA | 1..460 | 13..473 | 2373 | 97 | Plus |
Dgri\GH13222-PA | 1214 | GH13222-PA | 1045..1104 | 414..473 | 169 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Abi-PF | 473 | CG9749-PF | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PB | 473 | CG9749-PB | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PA | 473 | CG9749-PA | 1..473 | 1..473 | 2513 | 100 | Plus |
Abi-PD | 477 | CG9749-PD | 1..477 | 1..473 | 2498 | 99.2 | Plus |
Abi-PE | 472 | CG9749-PE | 1..472 | 1..473 | 2497 | 99.8 | Plus |
Abi-PC | 472 | CG9749-PC | 1..472 | 1..473 | 2497 | 99.8 | Plus |
Cortactin-PD | 559 | CG3637-PD | 290..553 | 196..470 | 187 | 28.4 | Plus |
Cortactin-PC | 559 | CG3637-PC | 290..553 | 196..470 | 187 | 28.4 | Plus |
Cortactin-PB | 559 | CG3637-PB | 290..553 | 196..470 | 187 | 28.4 | Plus |
Cortactin-PA | 559 | CG3637-PA | 290..553 | 196..470 | 187 | 28.4 | Plus |
Dap160-PH | 1005 | CG1099-PH | 941..1000 | 414..473 | 165 | 45 | Plus |
Dap160-PB | 1014 | CG1099-PB | 941..1000 | 414..473 | 165 | 45 | Plus |
Dap160-PG | 1088 | CG1099-PG | 1024..1083 | 414..473 | 165 | 45 | Plus |
Dap160-PC | 1096 | CG1099-PC | 1023..1082 | 414..473 | 165 | 45 | Plus |
Dap160-PA | 1097 | CG1099-PA | 1024..1083 | 414..473 | 165 | 45 | Plus |
Dap160-PD | 1190 | CG1099-PD | 1020..1079 | 414..473 | 165 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24554-PA | 472 | GI24554-PA | 1..472 | 1..473 | 2435 | 97 | Plus |
Dmoj\GI18101-PA | 1114 | GI18101-PA | 1041..1100 | 414..473 | 171 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23309-PA | 461 | GL23309-PA | 1..461 | 13..473 | 2389 | 98.1 | Plus |
Dper\GL25867-PA | 1126 | GL25867-PA | 1053..1112 | 414..473 | 167 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22007-PA | 473 | GA22007-PA | 1..473 | 1..473 | 2446 | 97.7 | Plus |
Dpse\GA10691-PA | 1126 | GA10691-PA | 1053..1112 | 414..473 | 167 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25884-PA | 467 | GM25884-PA | 1..467 | 7..473 | 2491 | 100 | Plus |
Dsec\GM23277-PA | 1100 | GM23277-PA | 1027..1086 | 414..473 | 169 | 45 | Plus |
Dsec\GM15108-PA | 549 | GM15108-PA | 467..543 | 392..470 | 152 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20455-PA | 473 | GD20455-PA | 1..473 | 1..473 | 2521 | 100 | Plus |
Dsim\GD21654-PA | 606 | GD21654-PA | 533..592 | 414..473 | 167 | 45 | Plus |
Dsim\GD20012-PA | 549 | GD20012-PA | 467..543 | 392..470 | 153 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22620-PA | 467 | GJ22620-PA | 1..467 | 1..473 | 2391 | 96 | Plus |
Dvir\GJ16288-PA | 1135 | GJ16288-PA | 1062..1121 | 414..473 | 169 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10907-PA | 464 | GK10907-PA | 1..464 | 1..473 | 1930 | 92 | Plus |
Dwil\GK21118-PA | 1126 | GK21118-PA | 1062..1121 | 414..473 | 169 | 45 | Plus |
Dwil\GK13516-PA | 557 | GK13516-PA | 466..554 | 373..470 | 154 | 38.8 | Plus |