BDGP Sequence Production Resources |
Search the DGRC for LD37115
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 371 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | shtd-RB |
Protein status: | LD37115.pep: wuzgold |
Preliminary Size: | 1777 |
Sequenced Size: | 1799 |
Gene | Date | Evidence |
---|---|---|
CG9198 | 2001-07-04 | Blastp of sequenced clone |
CG9198 | 2003-01-01 | Sim4 clustering to Release 3 |
shtd | 2008-04-29 | Release 5.5 accounting |
shtd | 2008-08-15 | Release 5.9 accounting |
shtd | 2008-12-18 | 5.12 accounting |
1799 bp (1799 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051879
> LD37115.complete CTCGCAAGCCTATTGCAATATCATGGCTGGAGCTGCCTTCTGCATTGGTC TCAAGTACGCCGGCACTGAGAATCTGGTGGCCTTTGCCACGCTGCGGTCG GTGATAAAGGATTTCCTTCGCTTCCCCAGCAGGCCGATGGGCGAATGTGC CGGTCGCACCACTGTGGAGAGCTGCCTGATGGTGCTGCTCATCTCGATCT CGTTGGTGTTCGCCGGCTCCGGCAACTGCGAAATTCTTCGCATAATTCGG TTTCTCAGGTCGCGAGTGGGACCACAATATCCGCACATAACCTACGGCTC TCACATGGCCATACACATGTCGCTTGGCCTGCTATTCCTCGGCGCGGGTC GCTTCACCATTTCCCAGACACCGGAGTCGATTGCTGCACTGGTCTGCGCC TTCTTCCCCAAGTTTCCCATACACAGCAACGACAATCGATACCATCTGCA AGCGCTGAGACATCTCTATGTACTGGCTGTGGAACCGCGCCTGTTCCTTC CCCGGGACATTGACACCAATAAGCTGTGCCTGGCCAACATATCCGTGTTG GAGGTGGGTGCCACCGAGCTGCGCCGCCTGCCCATCGCTCCCTGCATCCT GCCAGTGCTGAGCACCCTGCAGCAGGTGGTGGTGGACGACGAGAACTATT GGCCAGTGTGCTTCGAGCGATCGCGCAACTGGGATCAGCTGGAAAAGGCG CTGGAGATGAGTGCACCGATTGATATTAAGAAGCGAACGGGCTGCCTTTC CCACTTGGAGGACCCGGACAGGCTGAAGAGCATGCTGGCCCAAACATTGA CGATGGAACAGAGCATCTGTTGGCAGATCGATATGAACGACCTGCAGCAG TTTGCCAGCGAACGTATGGTGAAGCAGTTCCTCAGTCGCTGCCTGGACAC CAAAGGCACGGATTTGAGTCCCCCGGAGCTGATGAAGCGGCACCAGGTGA TGCTGCTATTCTACAATGCCGTGGTCAAGGATCGCATGCATTTCCTGCCG GTTTACCTAACCCTATACGATCACGTAACCAAGTCCATGCCGAACAACAT CGATGTGTGGCAGATGAAGCTCATCGATGCCTATTTGAGTCGCAGCCAGG AGTCCGAGCATCCGCTCATCTCCGTGGAGCTTATCCAAATGATGCAAGAG CTCTTCAAGCAGGAAATGGAGGACTCGACGCGCGAGTTGTGCTTACCGCT GCGCGAGTTCCTCAGCCGAAGGCGTCTGGATCCCAGCTATGTGACCACAG TCAGTGGACCGGACTTGCAGCGAGCCTTCTGCGTGATCAATTACTACAAT CTGTTGCCGAATATGTTGAATGGAGTGGACTTGAGCACGGGCACAGTTAA CTATATGCGTCTTTTATACGAATTCCGCCGGCTGAATCTCGGCGCGCACA CCATATTTGGCCTAATGAAGATCCTACAGTCACTGGCCACCGAAGTGGTG ACTCTGGATGAGGCAGCCCTTCTGGCGTACACCATGGGTGACCAGTGATG ATCGATGGAAATTCTTTTTTGCTAGACCCATATTACTGTACATTCATTTC TAAATAATATTATTGCACATTATTTCAAAATTTCGCCGCCACTTATAATC GAAACTTTGCATAAAAGTTTGCTGCCCAACTCTTGAAATTATATTGTTAT ACAATCACGTCGAAACGTTTTGGATATGAATATTTAAATGCATGTTCCTT AATGTTTAACGATTTAACGATAGCACAAAAACTGTATAAAATATATTTAC AAATAAATAGCCCATAACGCTTGCAAAATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15345485..15346243 | 1780..1022 | 3795 | 100 | Minus |
chrX | 22417052 | chrX | 15346303..15346886 | 1021..438 | 2920 | 100 | Minus |
chrX | 22417052 | chrX | 15346950..15347384 | 438..4 | 2175 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15455542..15456302 | 1782..1022 | 3805 | 100 | Minus |
X | 23542271 | X | 15456362..15456945 | 1021..438 | 2920 | 100 | Minus |
X | 23542271 | X | 15457009..15457443 | 438..4 | 2175 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15463640..15464400 | 1782..1022 | 3805 | 100 | Minus |
X | 23527363 | X | 15464460..15465043 | 1021..438 | 2920 | 100 | Minus |
X | 23527363 | X | 15465107..15465541 | 438..4 | 2175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15345485..15346243 | 1022..1780 | 100 | <- | Minus |
chrX | 15346303..15346885 | 439..1021 | 100 | <- | Minus |
chrX | 15346950..15347387 | 1..438 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6093 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6093 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6093 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6093 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6093 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6375 | 1..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6375 | 1..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4702..6481 | 1..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4596..6375 | 1..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shtd-RA | 4702..6481 | 1..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15455544..15456302 | 1022..1780 | 100 | <- | Minus |
X | 15456362..15456944 | 439..1021 | 100 | <- | Minus |
X | 15457009..15457446 | 1..438 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15455544..15456302 | 1022..1780 | 100 | <- | Minus |
X | 15456362..15456944 | 439..1021 | 100 | <- | Minus |
X | 15457009..15457446 | 1..438 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15455544..15456302 | 1022..1780 | 100 | <- | Minus |
X | 15456362..15456944 | 439..1021 | 100 | <- | Minus |
X | 15457009..15457446 | 1..438 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15349577..15350335 | 1022..1780 | 100 | <- | Minus |
arm_X | 15350395..15350977 | 439..1021 | 100 | <- | Minus |
arm_X | 15351042..15351479 | 1..438 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15463642..15464400 | 1022..1780 | 100 | <- | Minus |
X | 15464460..15465042 | 439..1021 | 100 | <- | Minus |
X | 15465107..15465544 | 1..438 | 99 | Minus |
Translation from 0 to 1497
> LD37115.hyp RQAYCNIMAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPMGECA GRTTVESCLMVLLISISLVFAGSGNCEILRIIRFLRSRVGPQYPHITYGS HMAIHMSLGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRYHLQ ALRHLYVLAVEPRLFLPRDIDTNKLCLANISVLEVGATELRRLPIAPCIL PVLSTLQQVVVDDENYWPVCFERSRNWDQLEKALEMSAPIDIKKRTGCLS HLEDPDRLKSMLAQTLTMEQSICWQIDMNDLQQFASERMVKQFLSRCLDT KGTDLSPPELMKRHQVMLLFYNAVVKDRMHFLPVYLTLYDHVTKSMPNNI DVWQMKLIDAYLSRSQESEHPLISVELIQMMQELFKQEMEDSTRELCLPL REFLSRRRLDPSYVTTVSGPDLQRAFCVINYYNLLPNMLNGVDLSTGTVN YMRLLYEFRRLNLGAHTIFGLMKILQSLATEVVTLDEAALLAYTMGDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
shtd-PA | 2030 | CG9198-PA | 1534..2030 | 2..498 | 2575 | 100 | Plus |
Translation from 22 to 1497
> LD37115.pep MAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPMGECAGRTTVES CLMVLLISISLVFAGSGNCEILRIIRFLRSRVGPQYPHITYGSHMAIHMS LGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRYHLQALRHLYV LAVEPRLFLPRDIDTNKLCLANISVLEVGATELRRLPIAPCILPVLSTLQ QVVVDDENYWPVCFERSRNWDQLEKALEMSAPIDIKKRTGCLSHLEDPDR LKSMLAQTLTMEQSICWQIDMNDLQQFASERMVKQFLSRCLDTKGTDLSP PELMKRHQVMLLFYNAVVKDRMHFLPVYLTLYDHVTKSMPNNIDVWQMKL IDAYLSRSQESEHPLISVELIQMMQELFKQEMEDSTRELCLPLREFLSRR RLDPSYVTTVSGPDLQRAFCVINYYNLLPNMLNGVDLSTGTVNYMRLLYE FRRLNLGAHTIFGLMKILQSLATEVVTLDEAALLAYTMGDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21034-PA | 2030 | GF21034-PA | 1538..2030 | 1..491 | 2366 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19400-PA | 2031 | GG19400-PA | 1541..2031 | 1..491 | 2467 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24489-PA | 3505 | GH24489-PA | 1578..1913 | 1..336 | 1621 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
shtd-PA | 2030 | CG9198-PA | 1540..2030 | 1..491 | 2540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15242-PA | 2019 | GI15242-PA | 1532..2005 | 1..474 | 2111 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14737-PA | 1997 | GL14737-PA | 1505..1995 | 1..489 | 2176 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21606-PA | 2023 | GA21606-PA | 1531..2023 | 1..491 | 2200 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19547-PA | 2005 | GM19547-PA | 1515..2005 | 1..491 | 2606 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15798-PA | 1045 | GD15798-PA | 555..1045 | 1..491 | 2588 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16572-PA | 2014 | GJ16572-PA | 1531..2005 | 1..476 | 2123 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20008-PA | 2047 | GK20008-PA | 1554..2029 | 1..476 | 2181 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16046-PA | 2028 | GE16046-PA | 1538..2028 | 1..491 | 2505 | 94.5 | Plus |