BDGP Sequence Production Resources |
Search the DGRC for LD37258
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 372 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13601-RA |
Protein status: | LD37258.pep: gold |
Preliminary Size: | 1234 |
Sequenced Size: | 1114 |
Gene | Date | Evidence |
---|---|---|
CG13601 | 2001-01-01 | Release 2 assignment |
CG13601 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13601 | 2003-01-16 | Blastp of sequenced clone |
CG13601 | 2008-04-29 | Release 5.5 accounting |
CG13601 | 2008-08-15 | Release 5.9 accounting |
CG13601 | 2008-12-18 | 5.12 accounting |
1114 bp (1114 high quality bases) assembled on 2003-01-16
GenBank Submission: AY118558
> LD37258.complete TGAATATTTTGTAATAGTTATTAGTAAAAAATTAGTAAAGTAAAACAATG GTTATTGGCGTCTTCCCGGCGGCCAAGCTCGGCATTTTGGCCATCAAGCA GGTCAGCAAGCCGATAGCCAACGTGATTAAGTCCAATGCCAAATCGAGCC CCTTCTTCAGGAAGTACATATGCATGCCGCCCGCACAGTTCTACAACTGG GTAGAGGTGAAGACCAAGATGTGGGCCCTGAACATGGGTGGTCGCGTTAA TGTTCCACCGCTGAACGAGGCGATGGCCATTGAGCTGGGAGCCAATCTGC TTGGCGAGTTCATCATCTTCTCGATCGGAGCCGGTCTTTTGATTTTCGAG TACTCACGTCAAACCATCAAGGAGAACAAGAAAAACGAGTTGGCGCAATC GGAGAAGATGGAACTAACCAATATGCTGACGGAGATGAACTTTCGGCTGG AGCGACAGGATGCCCAGATACGAGAAATGACGCGAGTGCTGGCTGATCTA GATTCGCGAAACATTTTCCGGTGGCACAAGGAGCCGATTCAGGAATACGT GCCCTTCGATCCCGACACGCCGGACCAGAGTGCCAGCGCCAGGAATCCGA AAAAGTTCGACAGCTTATATGACCCGCAAGGCGGTATGGCCTTCCGCGCC CTGCACTTCCTGGACACGCAGATCTTCGTGGACGGACGCAACCGCAAGGC CAAGGAGGCTCTCCAGCACCTGGATGAGGTGGCCGTGCAGCTGGAGCAGT CTCTGGGAGAGGCAGCCACCGTTGCCGTTGCCAGCTCACTGCCTACAAAA GCAGCCGACCTTTGACCAAAGCGGCAGCTAGAGCAGGATCTGGCCCTGCT CATGATGGCAGTGGCGATGGAGGAACAGTAAGGCCGCCCGCTTGTACACA TTCAACCTGCAGACCATTTCATCAGTGCTAGTTATGATCAAATCGCGTGT TACCATTTCGTACTTTAAGTATAAAAGTCAATAGTATTCTATAACTATTG GACGTTTGTAGTTATATTTATTAATTTTTATTGTTACCGCAGACAAACAA CTAAAGAGATGCAAAACAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19749818..19750390 | 1072..500 | 2850 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 19750873..19751061 | 189..2 | 880 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 19750649..19750817 | 358..190 | 845 | 100 | Minus |
chr3R | 27901430 | chr3R | 19750444..19750591 | 505..358 | 725 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23926371..23926944 | 1073..500 | 2870 | 100 | Minus |
3R | 32079331 | 3R | 23927427..23927615 | 189..1 | 945 | 100 | Minus |
3R | 32079331 | 3R | 23927203..23927371 | 358..190 | 845 | 100 | Minus |
3R | 32079331 | 3R | 23926998..23927145 | 505..358 | 725 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23667202..23667775 | 1073..500 | 2870 | 100 | Minus |
3R | 31820162 | 3R | 23668258..23668446 | 189..1 | 945 | 100 | Minus |
3R | 31820162 | 3R | 23668034..23668202 | 358..190 | 845 | 100 | Minus |
3R | 31820162 | 3R | 23667829..23667976 | 505..358 | 725 | 99.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19750649..19750817 | 190..358 | 100 | <- | Minus |
chr3R | 19750873..19751061 | 1..189 | 98 | Minus | |
chr3R | 19749818..19750388 | 502..1072 | 99 | <- | Minus |
chr3R | 19750448..19750590 | 359..501 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 1..768 | 48..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 1..768 | 48..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RB | 1..834 | 48..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 1..768 | 48..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RB | 1..834 | 48..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 18..1089 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 18..1089 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 20..1091 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 18..1089 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13601-RA | 20..1091 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23926372..23926942 | 502..1072 | 100 | <- | Minus |
3R | 23927002..23927144 | 359..501 | 100 | <- | Minus |
3R | 23927203..23927371 | 190..358 | 100 | <- | Minus |
3R | 23927427..23927615 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23926372..23926942 | 502..1072 | 100 | <- | Minus |
3R | 23927002..23927144 | 359..501 | 100 | <- | Minus |
3R | 23927203..23927371 | 190..358 | 100 | <- | Minus |
3R | 23927427..23927615 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23926372..23926942 | 502..1072 | 100 | <- | Minus |
3R | 23927002..23927144 | 359..501 | 100 | <- | Minus |
3R | 23927203..23927371 | 190..358 | 100 | <- | Minus |
3R | 23927427..23927615 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19752094..19752664 | 502..1072 | 100 | <- | Minus |
arm_3R | 19752724..19752866 | 359..501 | 100 | <- | Minus |
arm_3R | 19752925..19753093 | 190..358 | 100 | <- | Minus |
arm_3R | 19753149..19753337 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23667203..23667773 | 502..1072 | 100 | <- | Minus |
3R | 23667833..23667975 | 359..501 | 100 | <- | Minus |
3R | 23668034..23668202 | 190..358 | 100 | <- | Minus |
3R | 23668258..23668446 | 1..189 | 100 | Minus |
Translation from 47 to 814
> LD37258.pep MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYN WVEVKTKMWALNMGGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIF EYSRQTIKENKKNELAQSEKMELTNMLTEMNFRLERQDAQIREMTRVLAD LDSRNIFRWHKEPIQEYVPFDPDTPDQSASARNPKKFDSLYDPQGGMAFR ALHFLDTQIFVDGRNRKAKEALQHLDEVAVQLEQSLGEAATVAVASSLPT KAADL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17980-PA | 253 | GF17980-PA | 1..250 | 1..251 | 1192 | 89.7 | Plus |
Dana\GF17024-PA | 148 | GF17024-PA | 1..144 | 1..144 | 344 | 43.8 | Plus |
Dana\GF19900-PA | 104 | GF19900-PA | 1..104 | 1..104 | 215 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12393-PA | 255 | GG12393-PA | 1..255 | 1..255 | 1330 | 97.3 | Plus |
Dere\GG12391-PA | 166 | GG12391-PA | 1..153 | 1..153 | 322 | 38.6 | Plus |
Dere\GG12392-PA | 111 | GG12392-PA | 1..109 | 1..109 | 230 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17511-PA | 255 | GH17511-PA | 1..239 | 1..239 | 1100 | 83.7 | Plus |
Dgri\GH17510-PA | 104 | GH17510-PA | 1..104 | 1..104 | 201 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13601-PB | 277 | CG13601-PB | 1..255 | 1..255 | 1300 | 100 | Plus |
CG13601-PA | 255 | CG13601-PA | 1..255 | 1..255 | 1300 | 100 | Plus |
CG43999-PC | 166 | CR43999-PC | 1..153 | 1..153 | 315 | 38.6 | Plus |
CG43999-PB | 166 | CR43999-PB | 1..153 | 1..153 | 315 | 38.6 | Plus |
CG43998-PD | 153 | CG43998-PD | 1..152 | 1..152 | 264 | 35.5 | Plus |
CG43998-PC | 153 | CG43998-PC | 1..152 | 1..152 | 264 | 35.5 | Plus |
CG43998-PB | 153 | CG43998-PB | 1..152 | 1..152 | 264 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10378-PA | 251 | GI10378-PA | 1..249 | 1..252 | 1117 | 82.1 | Plus |
Dmoj\GI16934-PA | 155 | GI16934-PA | 1..140 | 2..141 | 252 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23345-PA | 131 | GL23345-PA | 1..114 | 1..113 | 549 | 90.4 | Plus |
Dper\GL23344-PA | 104 | GL23344-PA | 1..104 | 1..104 | 261 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12394-PA | 254 | GA12394-PA | 1..251 | 1..251 | 1139 | 84.9 | Plus |
Dpse\GA12395-PB | 252 | GA12395-PB | 1..141 | 1..141 | 356 | 46.1 | Plus |
Dpse\GA12395-PB | 252 | GA12395-PB | 149..252 | 1..104 | 259 | 48.1 | Plus |
Dpse\GA12395-PA | 104 | GA12395-PA | 1..104 | 1..104 | 258 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23530-PA | 253 | GM23530-PA | 1..253 | 1..255 | 1310 | 97.3 | Plus |
Dsec\GM23528-PA | 170 | GM23528-PA | 1..153 | 1..153 | 330 | 39.2 | Plus |
Dsec\GM23529-PA | 111 | GM23529-PA | 1..104 | 1..104 | 238 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18341-PA | 255 | GD18341-PA | 1..255 | 1..255 | 1346 | 98.8 | Plus |
Dsim\GD18340-PA | 111 | GD18340-PA | 1..104 | 1..104 | 238 | 43.3 | Plus |
Dsim\GD18338-PA | 67 | GD18338-PA | 1..57 | 1..57 | 164 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22840-PA | 251 | GJ22840-PA | 1..243 | 1..243 | 1115 | 83.5 | Plus |
Dvir\GJ22839-PA | 103 | GJ22839-PA | 1..103 | 2..104 | 223 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22621-PA | 253 | GK22621-PA | 1..250 | 1..251 | 1065 | 77.7 | Plus |
Dwil\GK22620-PA | 104 | GK22620-PA | 1..104 | 1..104 | 303 | 51.9 | Plus |
Dwil\GK19115-PA | 108 | GK19115-PA | 10..108 | 6..104 | 293 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23911-PA | 255 | GE23911-PA | 1..255 | 1..255 | 1322 | 96.9 | Plus |
Dyak\GE23909-PA | 166 | GE23909-PA | 1..144 | 1..144 | 332 | 41.7 | Plus |
Dyak\GE23910-PA | 153 | GE23910-PA | 1..152 | 1..152 | 260 | 34.9 | Plus |
Translation from 47 to 814
> LD37258.hyp MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYN WVEVKTKMWALNMGGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIF EYSRQTIKENKKNELAQSEKMELTNMLTEMNFRLERQDAQIREMTRVLAD LDSRNIFRWHKEPIQEYVPFDPDTPDQSASARNPKKFDSLYDPQGGMAFR ALHFLDTQIFVDGRNRKAKEALQHLDEVAVQLEQSLGEAATVAVASSLPT KAADL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13601-PA | 255 | CG13601-PA | 1..255 | 1..255 | 1300 | 100 | Plus |
CG13601-PB | 277 | CG13601-PB | 1..255 | 1..255 | 1300 | 100 | Plus |
CG43999-PC | 166 | CR43999-PC | 1..153 | 1..153 | 315 | 38.6 | Plus |
CG43999-PB | 166 | CR43999-PB | 1..153 | 1..153 | 315 | 38.6 | Plus |
CG43998-PD | 153 | CG43998-PD | 1..152 | 1..152 | 264 | 35.5 | Plus |