BDGP Sequence Production Resources |
Search the DGRC for LD37276
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 372 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18766-RA |
Protein status: | LD37276.pep: gold |
Preliminary Size: | 1791 |
Sequenced Size: | 1656 |
Gene | Date | Evidence |
---|---|---|
CG18766 | 2001-01-01 | Release 2 assignment |
CG5995 | 2001-01-01 | Release 2 assignment |
CG18766 | 2001-07-04 | Blastp of sequenced clone |
CG18766 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18766 | 2008-04-29 | Release 5.5 accounting |
CG18766 | 2008-08-15 | Release 5.9 accounting |
CG18766 | 2008-12-18 | 5.12 accounting |
1656 bp (1656 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051883
> LD37276.complete CGAGAGCTGCGCAGCGTAGGAGCTACAAACTACGTTTTTCGTGTGTTTCC CTCTTGAAGATAATTAAAATTTAATTATTTGACTTATTATTAAGTTTTGT GCCCACGCTGTTGGCGTCGTAGTGTTGTTGTTTCGCCCGTTGTTGCATGG AGCAAAGCGAAAAACGTAACAATAGAACGCAATCAACGCAAGAAAATCGG ATGTGGATGCGATGTGAGTGAGCGAATCCGTGTACAGTATGCCAGCCCAC TAGATAAACCGCTTCATGTCCTCCATCAGCTGGCAGACGAAGATTGTCGG GCAATCCCATTTGTCGGCAGTAAGACCCATGTGAAATGCCTTATGAAAAA TTCAACAAAAAGCGCCGACAATGGGAGGATAGTGGTGTTCTAGAGCTGAT CAAACTATGGAAAGTCTGCGCCTATGAGCTGCGCACCATTAAACGCAATG GCCATCTGTATGTGGCAATGGCCAAGCAGCTAACCTCGCTGGGCGTCCCT GTTACCGCACTCGAGGTTCACTTTAAAGTCAACAATCTAACGCAGCGCTA CCGGCAGGAGCAGAAGACCTTTGAGACCACAGGCATCATCAGCACCTGGA AGTTCTACAGTCAAGTGGATGATGTGTTTAAGAGTCTGGCCGCACACACC GGTTACAAAGACAAACGCATGACAAGTGCGTCCAATACGAGCAGCTTACC ATCCACATCCGAGTCACCAGTTTGGAAGAATCCAATGTCTCAGCAAGAGT TTAATAGTAACAACACGGAGGGGTTCTATAAGACCGAGTACGGGATGCAT CGGCACTTTATGGACCACTCCCAGCCACCACCCAATGCCGGCAGCGTGGA CAACTTCATGGCCTCATCGGCGGCCGTGGCGGCGGTGGCTGCCGCTGCCT CAGCCCGCCTGGCGGATAACAACATGGATCAGCAAATGAACACGGCTGCC GGTGGAAGCGGTGGCAGTGGTGGTGGTGGGGGCAACACCAATGGAGGCGT GGCCAACTACCAGAAGATCAAGAAGTCGCACGAGGACTACGACAAGTTCG TGGACATTGTGAAGAACATCGTGGACACGCACAAGAGCACTCCCGATAAG GTGGACACGTTCGGCGACTTCATCAAATCGTACATGAAGCGCTGGCCGGA GCGGCTGCAGGACGAGGCCATCAACCACATCACCAACTATGTGATCGTGA AGAACATGGAGCACAGCATGGTCAGCAGCCACAATCCCGAGGGGGTGAAC AACCGACAATAACAATACAAGCAGGAGCCCAACAACTGAACGAGTTGTTG GACGACGCAGCTCCAGGAACCAGGCACAGAAGCCGAACGAAGTGAGACGT TAGGCGAGGATTACTTAAGGTGGCGCGCAGTTACTTAACCGCATCTGAGT TGCGGCCAAGTTCATTGGACACACACACGGCATACAGTATTTTTTGTATA GTTAAAATATACATTGGAGTTTTAGTTCTCGACGATCGCGCCCTCGATAC AGAGTTGACTTCCGTAAAGAGGGGGCTGGATCGATCAATCGTGCATAGAG ATCCTAGGGAGTACATTACATTTAGACACCATTTCCTACTGTTAGCTGTA AACTATTATGCATAAATTAATAAATGCTTTAACGATTAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 23065265..23066120 | 1637..782 | 4280 | 100 | Minus |
chr3R | 27901430 | chr3R | 23066377..23066693 | 658..342 | 1585 | 100 | Minus |
chr3R | 27901430 | chr3R | 23067940..23068159 | 220..1 | 1100 | 100 | Minus |
chr3R | 27901430 | chr3R | 23066182..23066305 | 782..659 | 620 | 100 | Minus |
chr3R | 27901430 | chr3R | 23066753..23066874 | 341..220 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 27242334..27243190 | 1638..782 | 4285 | 100 | Minus |
3R | 32079331 | 3R | 27243447..27243763 | 658..342 | 1585 | 100 | Minus |
3R | 32079331 | 3R | 27245010..27245229 | 220..1 | 1100 | 100 | Minus |
3R | 32079331 | 3R | 27243252..27243375 | 782..659 | 620 | 100 | Minus |
3R | 32079331 | 3R | 27243823..27243944 | 341..220 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26983165..26984021 | 1638..782 | 4285 | 100 | Minus |
3R | 31820162 | 3R | 26984278..26984594 | 658..342 | 1585 | 100 | Minus |
3R | 31820162 | 3R | 26985841..26986060 | 220..1 | 1100 | 100 | Minus |
3R | 31820162 | 3R | 26984083..26984206 | 782..659 | 620 | 100 | Minus |
3R | 31820162 | 3R | 26984654..26984775 | 341..220 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 664..715 | 995..943 | 127 | 73.6 | Minus |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 682..719 | 986..949 | 118 | 78.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23066377..23066693 | 342..658 | 100 | <- | Minus |
chr3R | 23066753..23066874 | 220..341 | 100 | <- | Minus |
chr3R | 23065265..23066120 | 782..1637 | 100 | <- | Minus |
chr3R | 23066183..23066305 | 659..781 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..927 | 336..1262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..927 | 336..1262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RB | 1..927 | 336..1262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..927 | 336..1262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RB | 1..927 | 336..1262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..1637 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..1637 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 21..1651 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 1..1637 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18766-RA | 21..1651 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27243823..27243944 | 220..341 | 100 | <- | Minus |
3R | 27242335..27243190 | 782..1637 | 100 | <- | Minus |
3R | 27243253..27243375 | 659..781 | 100 | <- | Minus |
3R | 27243447..27243763 | 342..658 | 100 | <- | Minus |
3R | 27245011..27245229 | 1..219 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27243823..27243944 | 220..341 | 100 | <- | Minus |
3R | 27242335..27243190 | 782..1637 | 100 | <- | Minus |
3R | 27243253..27243375 | 659..781 | 100 | <- | Minus |
3R | 27243447..27243763 | 342..658 | 100 | <- | Minus |
3R | 27245011..27245229 | 1..219 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27243823..27243944 | 220..341 | 100 | <- | Minus |
3R | 27242335..27243190 | 782..1637 | 100 | <- | Minus |
3R | 27243253..27243375 | 659..781 | 100 | <- | Minus |
3R | 27243447..27243763 | 342..658 | 100 | <- | Minus |
3R | 27245011..27245229 | 1..219 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23068057..23068912 | 782..1637 | 100 | <- | Minus |
arm_3R | 23068975..23069097 | 659..781 | 100 | <- | Minus |
arm_3R | 23069169..23069485 | 342..658 | 100 | <- | Minus |
arm_3R | 23069545..23069666 | 220..341 | 100 | <- | Minus |
arm_3R | 23070733..23070951 | 1..219 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26984084..26984206 | 659..781 | 100 | <- | Minus |
3R | 26983166..26984021 | 782..1637 | 100 | <- | Minus |
3R | 26984278..26984594 | 342..658 | 100 | <- | Minus |
3R | 26984654..26984775 | 220..341 | 100 | <- | Minus |
3R | 26985842..26986060 | 1..219 | 100 | Minus |
Translation from 335 to 1261
> LD37276.pep MPYEKFNKKRRQWEDSGVLELIKLWKVCAYELRTIKRNGHLYVAMAKQLT SLGVPVTALEVHFKVNNLTQRYRQEQKTFETTGIISTWKFYSQVDDVFKS LAAHTGYKDKRMTSASNTSSLPSTSESPVWKNPMSQQEFNSNNTEGFYKT EYGMHRHFMDHSQPPPNAGSVDNFMASSAAVAAVAAAASARLADNNMDQQ MNTAAGGSGGSGGGGGNTNGGVANYQKIKKSHEDYDKFVDIVKNIVDTHK STPDKVDTFGDFIKSYMKRWPERLQDEAINHITNYVIVKNMEHSMVSSHN PEGVNNRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18722-PA | 308 | GF18722-PA | 1..308 | 1..308 | 1655 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12128-PA | 308 | GG12128-PA | 1..308 | 1..308 | 1655 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16684-PA | 311 | GH16684-PA | 1..311 | 1..308 | 1343 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18766-PC | 308 | CG18766-PC | 1..308 | 1..308 | 1630 | 100 | Plus |
CG18766-PA | 308 | CG18766-PA | 1..308 | 1..308 | 1630 | 100 | Plus |
CG18766-PB | 308 | CG18766-PB | 1..308 | 1..308 | 1630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22302-PA | 311 | GI22302-PA | 1..311 | 1..308 | 1347 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23053-PA | 309 | GL23053-PA | 1..309 | 1..308 | 1582 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15070-PA | 309 | GA15070-PA | 1..309 | 1..308 | 1582 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10120-PA | 308 | GM10120-PA | 1..308 | 1..308 | 1675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19209-PA | 71 | GD19209-PA | 1..71 | 238..308 | 238 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10487-PA | 311 | GJ10487-PA | 1..311 | 1..308 | 1348 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22597-PA | 307 | GK22597-PA | 1..307 | 1..308 | 1307 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10576-PA | 303 | GE10576-PA | 1..303 | 1..308 | 1628 | 98.1 | Plus |
Translation from 335 to 1261
> LD37276.hyp MPYEKFNKKRRQWEDSGVLELIKLWKVCAYELRTIKRNGHLYVAMAKQLT SLGVPVTALEVHFKVNNLTQRYRQEQKTFETTGIISTWKFYSQVDDVFKS LAAHTGYKDKRMTSASNTSSLPSTSESPVWKNPMSQQEFNSNNTEGFYKT EYGMHRHFMDHSQPPPNAGSVDNFMASSAAVAAVAAAASARLADNNMDQQ MNTAAGGSGGSGGGGGNTNGGVANYQKIKKSHEDYDKFVDIVKNIVDTHK STPDKVDTFGDFIKSYMKRWPERLQDEAINHITNYVIVKNMEHSMVSSHN PEGVNNRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18766-PC | 308 | CG18766-PC | 1..308 | 1..308 | 1630 | 100 | Plus |
CG18766-PA | 308 | CG18766-PA | 1..308 | 1..308 | 1630 | 100 | Plus |
CG18766-PB | 308 | CG18766-PB | 1..308 | 1..308 | 1630 | 100 | Plus |