BDGP Sequence Production Resources |
Search the DGRC for LD37358
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 373 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5941-RA |
Protein status: | LD37358.pep: gold |
Preliminary Size: | 917 |
Sequenced Size: | 789 |
Gene | Date | Evidence |
---|---|---|
CG5941 | 2001-01-01 | Release 2 assignment |
CG5941 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5941 | 2003-03-19 | Blastp of sequenced clone |
CG5941 | 2008-04-29 | Release 5.5 accounting |
CG5941 | 2008-08-15 | Release 5.9 accounting |
CG5941 | 2008-12-18 | 5.12 accounting |
789 bp (789 high quality bases) assembled on 2003-03-19
GenBank Submission: AY051886
> LD37358.complete CGGATTAGCACCGTCGACCACGAAAAAAGAACGCAAGGAAATCGTGCAAA ATGTTCAAAAAATTCGAAGAGAAGGACAGCATTTCCAGCATTCAGCAGCT GAAGTCGTCTGTGCAGAAGGGCATACGTGCCAAGTTGCTGGAGGCCTATC CCAAGTTGGAGAGTCACATCGACCTGATCCTGCCCAAGAAGGACTCGTAC CGCATCGCCAAGTGCCATGACCACATCGAACTGCTGCTAAACGGAGCCGG CGACCAGGTGTTCTTTCGCCACCGCGATGGCCCCTGGATGCCTACCCTGC GCCTCCTGCACAAGTTCCCCTACTTCGTGACCATGCAGCAAGTGGACAAA GGCGCCATCCGCTTCGTCCTGAGCGGAGCGAACGTCATGTGTCCCGGCCT CACATCGCCAGGCGCCTGTATGACGCCGGCCGACAAGGACACCGTGGTGG CCATCATGGCTGAGGGCAAGGAGCACGCCCTGGCCGTTGGACTCCTCACG TTATCCACACAGGAAATTCTGGCGAAGAACAAAGGCATCGGTATCGAGAC GTACCACTTCCTCAACGACGGCCTGTGGAAGTCGAAGCCCGTGAAGTAGG CGAAATAGGAATCTGCACTTGCACTTTTTAGTCTTCTATGTCATGAGAGC AAAGAATGGTTTTTGATATACGCAACTGAGTCCTGATTATTATTTTTTTC TACTAATTTTACTCTGTCAGTTAAACTATTTAAAACATTGCGAAATATAA TTAATGGCATTTCAAGCGAGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5930494..5930797 | 214..517 | 1520 | 100 | Plus |
chrX | 22417052 | chrX | 5931108..5931362 | 518..771 | 1210 | 99.2 | Plus |
chrX | 22417052 | chrX | 5930273..5930425 | 62..214 | 765 | 100 | Plus |
chrX | 22417052 | chrX | 5930151..5930211 | 1..61 | 305 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6038262..6038565 | 214..517 | 1520 | 100 | Plus |
X | 23542271 | X | 6038876..6039130 | 518..772 | 1275 | 100 | Plus |
X | 23542271 | X | 6038041..6038193 | 62..214 | 765 | 100 | Plus |
X | 23542271 | X | 6037919..6037979 | 1..61 | 305 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6046360..6046663 | 214..517 | 1520 | 100 | Plus |
X | 23527363 | X | 6046974..6047228 | 518..772 | 1275 | 100 | Plus |
X | 23527363 | X | 6046139..6046291 | 62..214 | 765 | 100 | Plus |
X | 23527363 | X | 6046017..6046077 | 1..61 | 305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5930151..5930211 | 1..61 | 100 | -> | Plus |
chrX | 5930273..5930425 | 62..214 | 100 | -> | Plus |
chrX | 5930495..5930797 | 215..517 | 100 | -> | Plus |
chrX | 5931108..5931362 | 518..771 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 1..549 | 51..599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 1..549 | 51..599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 1..549 | 51..599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 1..549 | 51..599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 1..549 | 51..599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 35..805 | 1..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 35..805 | 1..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 44..814 | 1..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 35..805 | 1..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5941-RA | 28..798 | 1..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6037919..6037979 | 1..61 | 100 | -> | Plus |
X | 6038041..6038193 | 62..214 | 100 | -> | Plus |
X | 6038263..6038565 | 215..517 | 100 | -> | Plus |
X | 6038876..6039129 | 518..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6037919..6037979 | 1..61 | 100 | -> | Plus |
X | 6038041..6038193 | 62..214 | 100 | -> | Plus |
X | 6038263..6038565 | 215..517 | 100 | -> | Plus |
X | 6038876..6039129 | 518..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6037919..6037979 | 1..61 | 100 | -> | Plus |
X | 6038041..6038193 | 62..214 | 100 | -> | Plus |
X | 6038263..6038565 | 215..517 | 100 | -> | Plus |
X | 6038876..6039129 | 518..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5931952..5932012 | 1..61 | 100 | -> | Plus |
arm_X | 5932074..5932226 | 62..214 | 100 | -> | Plus |
arm_X | 5932296..5932598 | 215..517 | 100 | -> | Plus |
arm_X | 5932909..5933162 | 518..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6046361..6046663 | 215..517 | 100 | -> | Plus |
X | 6046974..6047227 | 518..771 | 100 | Plus | |
X | 6046017..6046077 | 1..61 | 100 | -> | Plus |
X | 6046139..6046291 | 62..214 | 100 | -> | Plus |
Translation from 50 to 598
> LD37358.hyp MFKKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKLESHIDLILPKKDSY RIAKCHDHIELLLNGAGDQVFFRHRDGPWMPTLRLLHKFPYFVTMQQVDK GAIRFVLSGANVMCPGLTSPGACMTPADKDTVVAIMAEGKEHALAVGLLT LSTQEILAKNKGIGIETYHFLNDGLWKSKPVK*
Translation from 50 to 598
> LD37358.pep MFKKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKLESHIDLILPKKDSY RIAKCHDHIELLLNGAGDQVFFRHRDGPWMPTLRLLHKFPYFVTMQQVDK GAIRFVLSGANVMCPGLTSPGACMTPADKDTVVAIMAEGKEHALAVGLLT LSTQEILAKNKGIGIETYHFLNDGLWKSKPVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22089-PA | 182 | GF22089-PA | 1..182 | 1..182 | 951 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18810-PA | 182 | GG18810-PA | 1..182 | 1..182 | 966 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17903-PA | 182 | GH17903-PA | 1..182 | 1..182 | 916 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MCTS1-PB | 182 | CG5941-PB | 1..182 | 1..182 | 949 | 100 | Plus |
MCTS1-PA | 182 | CG5941-PA | 1..182 | 1..182 | 949 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15297-PA | 182 | GI15297-PA | 1..182 | 1..182 | 930 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14904-PA | 182 | GL14904-PA | 1..182 | 1..182 | 949 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26512-PA | 182 | GA26512-PA | 1..182 | 1..182 | 949 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12460-PA | 182 | GM12460-PA | 1..182 | 1..182 | 968 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16778-PA | 182 | GD16778-PA | 1..182 | 1..182 | 969 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16502-PA | 182 | GJ16502-PA | 1..182 | 1..182 | 927 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15769-PA | 182 | GK15769-PA | 1..182 | 1..182 | 926 | 94 | Plus |
Dwil\GK12431-PA | 156 | GK12431-PA | 1..156 | 1..156 | 794 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17573-PA | 182 | GE17573-PA | 1..182 | 1..182 | 966 | 98.9 | Plus |