BDGP Sequence Production Resources |
Search the DGRC for LD37574
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 375 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | yps-RA |
Protein status: | LD37574.pep: gold |
Preliminary Size: | 1870 |
Sequenced Size: | 1774 |
Gene | Date | Evidence |
---|---|---|
CG5654 | 2001-01-01 | Release 2 assignment |
CG5654 | 2001-10-10 | Blastp of sequenced clone |
CG5654 | 2003-01-01 | Sim4 clustering to Release 3 |
yps | 2008-04-29 | Release 5.5 accounting |
yps | 2008-08-15 | Release 5.9 accounting |
yps | 2008-12-18 | 5.12 accounting |
1774 bp (1774 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061440
> LD37574.complete TCATGTTTCACTTCCGGAGCTTGCGAACAAAATAGAATCGCTAAGGCAAA GAAAACCCTGCGAGTGGCGAGTGTTTTAAGATCACACTCAAAAACAACAT CCAAAGTGGTTAGTGGCAGTTGAGAGAGTGCCCAAGACCCCGAATACCAG CCGGGCAGACACGAACAACACCAGCAGCAGCAGCACCACCATCATCAACA GCAGCAGCAGCATTTCCCGCTTTTCGTTTTCGTCGTCGCCGAACAACAAA TAACAAAACCACGACAAACGATGGCTGATGCCGCGGAGAGTAAGCCACTG GCCGCCGAACAGCAGCAGGCGCAGCAGCAGCCGGAGCAGCAGCAGAATCC GCCGAATCCGCAGGAGCAGGATCACGAGCAGGAGCCGCTGGACGAGCTGC AGGGACAGCAGGGCCAGCCCGCTCCGCCCACCAAGGAAGTCATCGCCACC AAAGTCACCGGCACCGTCAAGTGGTTCAACGTGAAGAGCGGCTACGGCTT CATCAACCGCAACGACACCAGAGAGGATGTCTTTGTGCACCAGAGCGCCA TTGCGCGGAACAACCCCAAAAAGGCGGTCCGCTCGGTGGGCGACGGTGAG GTCGTTGAGTTCGACGTGGTCATTGGTGAGAAGGGCAACGAGGCGGCCAA CGTGACCGGTCCCTCCGGTGAGCCGGTGCGGGGCAGTCAGTTTGCAGCGG ACAAGCGCCGTAACTTCCGTCCCTGGATGAAGAAGAATCGCCGCAAGGAT GGCGAAGTGGAAGGCGAAGACGCCGAATCGTCGGCCCAGCAGCAACAGCA GCAGGCGGCACCAATCGTTGACGGGCAGCCGCAGCAGCAGGTGCAGTCCG GCCCGCGTCAACCACGACAGAACTTCCGCCGAGGACCACCCGGTGGACCG CCCGGAGGACCTCGAGGTGGCCCCCGAGGACCGCCTGGTGGAGCTCCCGG TGGCCCCCGGCGCTACAACAACTATTATCTGCGTCAGCCGAGACGCGGCC TGGGCGGCGGTGACGGCAGCGCCGAGCCCGGTGTCCACGATCAGAATCCC GAGGGTCTGCAGCGCGGCGAGGGTCAGGGACCACGTCGCGGTGGAGGCCC ACCGGGCGGACCCCAGAGGCGCTTCTTCCGACGCAACTTCAACAATGGTC CACCGCCACCACGCCGCGACGGCGGAGAATACATTCAAGGCCAGGGACCG CCACGCCCACAACAGCCACGTCCACGTCGCCAGAGGAAACCAAATGGCCC TGGCGGTGGTTCGGAGCAGCAGCCAGAGAAGAACGGCGCTCAAGAGCTGC AAAATACAACCACAGAGAGCACTGCATAGAAAAGGATCCGAAAGGATCTA AATCGTCAACCGACAAACAAAAACATCGTCAGCAGTAGCCGCAGTATATA ACTACAATCGCAGAAAAACAGCAGCAGCAGCCCATCCTCAACATCAGCGA CCAATGCAACATCATGGTGCAATAAGATCAGCAAATGTTGCAGCAAATTT TGCTAAATGAGCCGCCGCGTTTTTTCGGTTTGTTTGCTTTTTGTTTAGTT TCGTAGGGCAGAGAATCAATTGTACAACTCATACCACAACAAAACTAACA TCCTCAAAATTTCAATCAAATTCAAAAACAAACAAAAAATTGTATAAAAT TTCCATCAAGCCTGGCCGTCGTCAAAAAATTGCATAATTGTGGAATTTTT ATTGTATGAACCAACAAACCAAACACGAAAACATAAATAAATTTCAATTA CACTGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yps-RA | 2070 | yps-RA | 161..1918 | 1..1758 | 8790 | 100 | Plus |
yps.b | 2323 | yps.b | 161..1918 | 1..1758 | 8790 | 100 | Plus |
yps.a | 1816 | yps.a | 24..1105 | 1..1082 | 5395 | 99.9 | Plus |
yps.a | 1816 | yps.a | 1095..1664 | 1189..1758 | 2850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12113590..12114328 | 1183..445 | 3695 | 100 | Minus |
chr3L | 24539361 | chr3L | 12112433..12112909 | 1756..1280 | 2385 | 100 | Minus |
chr3L | 24539361 | chr3L | 12115464..12115908 | 445..1 | 2225 | 100 | Minus |
chr3L | 24539361 | chr3L | 12113429..12113526 | 1281..1184 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12122837..12123575 | 1183..445 | 3695 | 100 | Minus |
3L | 28110227 | 3L | 12121678..12122156 | 1758..1280 | 2395 | 100 | Minus |
3L | 28110227 | 3L | 12124712..12125156 | 445..1 | 2225 | 100 | Minus |
3L | 28110227 | 3L | 12122676..12122773 | 1281..1184 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12115937..12116675 | 1183..445 | 3695 | 100 | Minus |
3L | 28103327 | 3L | 12114778..12115256 | 1758..1280 | 2395 | 100 | Minus |
3L | 28103327 | 3L | 12117812..12118256 | 445..1 | 2225 | 100 | Minus |
3L | 28103327 | 3L | 12115776..12115873 | 1281..1184 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2596..2966 | 164..521 | 256 | 56.9 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 7799..7904 | 1404..1503 | 136 | 64.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12112433..12112907 | 1282..1756 | 100 | <- | Minus |
chr3L | 12113429..12113526 | 1184..1281 | 100 | <- | Minus |
chr3L | 12113590..12114327 | 446..1183 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1059 | 271..1329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1059 | 271..1329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1059 | 271..1329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1059 | 271..1329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1059 | 271..1329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1705 | 52..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1705 | 52..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1750 | 7..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1705 | 52..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yps-RA | 1..1750 | 7..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12121680..12122154 | 1282..1756 | 100 | <- | Minus |
3L | 12122676..12122773 | 1184..1281 | 100 | <- | Minus |
3L | 12122837..12123574 | 446..1183 | 100 | <- | Minus |
3L | 12124712..12125156 | 1..445 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12121680..12122154 | 1282..1756 | 100 | <- | Minus |
3L | 12122676..12122773 | 1184..1281 | 100 | <- | Minus |
3L | 12122837..12123574 | 446..1183 | 100 | <- | Minus |
3L | 12124712..12125156 | 1..445 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12121680..12122154 | 1282..1756 | 100 | <- | Minus |
3L | 12122676..12122773 | 1184..1281 | 100 | <- | Minus |
3L | 12122837..12123574 | 446..1183 | 100 | <- | Minus |
3L | 12124712..12125156 | 1..445 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12115776..12115873 | 1184..1281 | 100 | <- | Minus |
arm_3L | 12117812..12118256 | 1..445 | 100 | Minus | |
arm_3L | 12114780..12115254 | 1282..1756 | 100 | <- | Minus |
arm_3L | 12115937..12116674 | 446..1183 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12114780..12115254 | 1282..1756 | 100 | <- | Minus |
3L | 12115776..12115873 | 1184..1281 | 100 | <- | Minus |
3L | 12115937..12116674 | 446..1183 | 100 | <- | Minus |
3L | 12117812..12118256 | 1..445 | 100 | Minus |
Translation from 270 to 1328
> LD37574.pep MADAAESKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQP APPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPK KAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFR PWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQ NFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGS AEPGVHDQNPEGLQRGEGQGPRRGGGPPGGPQRRFFRRNFNNGPPPPRRD GGEYIQGQGPPRPQQPRPRRQRKPNGPGGGSEQQPEKNGAQELQNTTTES TA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10852-PA | 347 | GF10852-PA | 1..347 | 1..352 | 955 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13856-PA | 297 | GG13856-PA | 1..297 | 1..352 | 681 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16919-PA | 345 | GH16919-PA | 27..155 | 41..172 | 574 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yps-PA | 352 | CG5654-PA | 1..352 | 1..352 | 1915 | 100 | Plus |
yps-PB | 340 | CG5654-PB | 1..337 | 1..337 | 1841 | 100 | Plus |
AGO2-PB | 1214 | CG7439-PB | 15..321 | 2..335 | 178 | 24 | Plus |
AGO2-PC | 1217 | CG7439-PC | 18..324 | 2..335 | 178 | 24 | Plus |
CG10555-PB | 926 | CG10555-PB | 291..594 | 14..327 | 164 | 26.1 | Plus |
CG10555-PA | 926 | CG10555-PA | 291..594 | 14..327 | 164 | 26.1 | Plus |
frm-PD | 268 | CG10625-PD | 118..244 | 205..335 | 156 | 39.9 | Plus |
frm-PA | 268 | CG10625-PA | 118..244 | 205..335 | 156 | 39.9 | Plus |
frm-PE | 652 | CG10625-PE | 502..628 | 205..335 | 156 | 39.9 | Plus |
frm-PB | 682 | CG10625-PB | 532..658 | 205..335 | 156 | 39.9 | Plus |
frm-PC | 682 | CG10625-PC | 532..658 | 205..335 | 156 | 39.9 | Plus |
frm-PJ | 752 | CG10625-PJ | 118..230 | 205..328 | 154 | 39.8 | Plus |
frm-PI | 766 | CG10625-PI | 118..230 | 205..328 | 154 | 39.8 | Plus |
frm-PH | 1180 | CG10625-PH | 532..644 | 205..328 | 154 | 39.8 | Plus |
lin-28-PA | 195 | CG17334-PA | 29..123 | 51..150 | 152 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13673-PA | 335 | GI13673-PA | 33..335 | 49..352 | 852 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15684-PA | 335 | GL15684-PA | 1..335 | 1..352 | 829 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23502-PA | 335 | GA23502-PA | 1..335 | 1..352 | 829 | 69.4 | Plus |
Dpse\GA14466-PA | 192 | GA14466-PA | 33..120 | 49..141 | 169 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24682-PA | 1378 | GM24682-PA | 1..302 | 1..299 | 1448 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12750-PA | 352 | GD12750-PA | 1..352 | 1..352 | 1719 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14010-PA | 340 | GJ14010-PA | 33..340 | 49..352 | 840 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16710-PA | 344 | GK16710-PA | 1..344 | 1..352 | 785 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20150-PA | 353 | GE20150-PA | 1..353 | 1..352 | 1135 | 92.9 | Plus |
Translation from 270 to 1328
> LD37574.hyp MADAAESKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQP APPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPK KAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFR PWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQ NFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGS AEPGVHDQNPEGLQRGEGQGPRRGGGPPGGPQRRFFRRNFNNGPPPPRRD GGEYIQGQGPPRPQQPRPRRQRKPNGPGGGSEQQPEKNGAQELQNTTTES TA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yps-PA | 352 | CG5654-PA | 1..352 | 1..352 | 1915 | 100 | Plus |
yps-PB | 340 | CG5654-PB | 1..337 | 1..337 | 1841 | 100 | Plus |
AGO2-PB | 1214 | CG7439-PB | 15..321 | 2..335 | 178 | 24 | Plus |
AGO2-PC | 1217 | CG7439-PC | 18..324 | 2..335 | 178 | 24 | Plus |
CG10555-PB | 926 | CG10555-PB | 291..594 | 14..327 | 164 | 26.1 | Plus |