BDGP Sequence Production Resources |
Search the DGRC for LD37690
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 376 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | Atg14-RA |
Protein status: | LD37690.pep: gold |
Preliminary Size: | 1844 |
Sequenced Size: | 1888 |
Gene | Date | Evidence |
---|---|---|
CG11877 | 2001-01-01 | Release 2 assignment |
CG11877 | 2001-07-04 | Blastp of sequenced clone |
CG11877 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11877 | 2008-04-29 | Release 5.5 accounting |
CG11877 | 2008-08-15 | Release 5.9 accounting |
CG11877 | 2008-12-18 | 5.12 accounting |
1888 bp (1888 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051888
> LD37690.complete CTCATATCGATAGCGATAATAGCAAAGTTAACAATAACAAAAGATATAAC ATAACAAATAATTGCAATGCTTTGGCTGTAATGGCAAACAGCTCCAGCTC CGACGAAAGCTGCAAGGCCCCCGACAACTTTCGCATCTCGAGCGCCTCCA CAAACGGCGAGGACGAGGAATCAGATGTCGCAGGATACACAACAAAGCGC AGGCCAACGGCAGCGACGAAGGAACTGTTGAAGGATGCGAACGCCAAGGA TAGGAACGCCACCACGGGAATGGGTGCCCACATGCGGTGCCCACTGTGCC ACAGCTGCAGCGCCAGCCGATTCCACTGTCGCAATTGCGTCAGAAACGGA AACATTACTCACAGCCAGGCGGAAAGGCCCGAAAGCCTGACGGAGAAGCA GCAGCGCTACATCAACCTGCAGGCGGGCCTCAAAACCTTCAGCACGCGCT ACGAACGCCTTATCGGGCAGCACCGCTCCAATGAAGATCGCCTGATGGCC ATCAAGGCCAAGCGAAAGCAACTGGAGCTCCTACAGCAACTAATCTCCGG CACGGGACAGAGACTGCGCGTCCTCGGCGAGCGACGCGATGAATTGCGTC GCGCCAATGCCGAGAAGCGGAAGAACCTACCTAAATACCCGGACAAGGTC AAGATGCTCGAAAACTACGTGTTGGATCGAGTGGAGAAAATAGAGAAACT CAGGGAGACCCATCTGGGTCTTCTGGACAGCATAAAACAGGCGGCGCGTC GCAGCATTCAGCAACTGGTCACCTATGTGTTTCCCATAGCTGAGGTGGTC CTCAAGGAGGAGCAACAGAGGCGGGCTAGTGTGGAGCGCACCGAGGAGGC GGAAACCATAGCGGCGCTGGCCGATGCCAAGAATACATCTTACATACGCG GCAAATGGGTTTTTCATGGCAGTGGGATCAGTGAAGTTCAATACAGGATT GTGGGCCCTTCGTTGCCAGCCAATGGCGACTATACCGCCTACCTGGACTG GCTGGCGGACAACAAGGACGACGTTCCCAAGGCCACGGCCAACGAGATTA CGCCGAGCAGGTTCGAAGCCTATCGCATTGTGGGCGCTCTTACCTACACG GCGCAGCTGACGCAGTTGCTCAGCTTCTACCTGAACGTGCGGCTGCCACA TAAGATCGCCTATGGCGACTTCTGTCGTAAGCTGCTCAACGAGGAACAGT TCCGGCGCAAAATCTCGCGCCTCAACTCCAATATCATGTATCTGGCCTAC ACACAGCAGGTGAAGTTGCGTGCCCTCATCGAACAGCATACGCTGGAAAA CCTACTAGCCATCCTCGATCTGGAGCGCAGCGACTTGGGTCGATATGGCC ATCTGGACGTGAACAATGCACCACTCATGAAGTCAGTGGACTCCCTACTA ATCGGCATCGAGACCGCCACGGAATCGGAGTCAGAGGACGAAAACTCTCT GCGCATGGACTGGGAGGCGGTGCCCAGCCTGACACCGCAGCCGGAGCTGG CGGATCCCAATCTGATGCCGGCGGCCAACCAGCAGTCTACCATCGCCTTC GTGCGAATGGCGGCCACATCGGTGCTGCGCTGGATCAAATGATCGCAGAC CAACAGACGTCCGATCTTTCGGCTATATCATCATGAGACACGCGTGTTAT CTTTTACAAATTAGACTAAGTAATCGTTTCTGTGACAGCACGTCGGTGTT TATCGGCAGTTGCTGGTTTTAGCGTTATCCTTTGGTTTACAGAACTAATT TTGTATCAATTATATATATACATATATATTCGCTGTGTGTAAAGAAAATG CGCCTTTTGGATTTATTTCTATTACATAACTTATTCGCCTTTATTTAATA AAAATGGTTCTCTATAAATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24939740..24940793 | 384..1437 | 5255 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 24940855..24941287 | 1437..1869 | 2150 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 24939285..24939669 | 1..385 | 1925 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29116843..29117896 | 384..1437 | 5270 | 100 | Plus |
3R | 32079331 | 3R | 29117958..29118393 | 1437..1872 | 2180 | 100 | Plus |
3R | 32079331 | 3R | 29116388..29116772 | 1..385 | 1925 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28857674..28858727 | 384..1437 | 5270 | 100 | Plus |
3R | 31820162 | 3R | 28858789..28859224 | 1437..1872 | 2180 | 100 | Plus |
3R | 31820162 | 3R | 28857219..28857603 | 1..385 | 1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24939285..24939669 | 1..385 | 100 | -> | Plus |
chr3R | 24939742..24940793 | 386..1437 | 99 | -> | Plus |
chr3R | 24940856..24941280 | 1438..1862 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1512 | 81..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1512 | 81..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atg14-RA | 1..1512 | 81..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1512 | 81..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atg14-RA | 1..1512 | 81..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1869 | 1..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1866 | 4..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atg14-RA | 1..1866 | 4..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11877-RA | 1..1869 | 1..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atg14-RA | 1..1866 | 4..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29116388..29116772 | 1..385 | 100 | -> | Plus |
3R | 29116845..29117896 | 386..1437 | 100 | -> | Plus |
3R | 29117959..29118390 | 1438..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29116388..29116772 | 1..385 | 100 | -> | Plus |
3R | 29116845..29117896 | 386..1437 | 100 | -> | Plus |
3R | 29117959..29118390 | 1438..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29116388..29116772 | 1..385 | 100 | -> | Plus |
3R | 29116845..29117896 | 386..1437 | 100 | -> | Plus |
3R | 29117959..29118390 | 1438..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24942110..24942494 | 1..385 | 100 | -> | Plus |
arm_3R | 24942567..24943618 | 386..1437 | 100 | -> | Plus |
arm_3R | 24943681..24944112 | 1438..1869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28857219..28857603 | 1..385 | 100 | -> | Plus |
3R | 28857676..28858727 | 386..1437 | 100 | -> | Plus |
3R | 28858790..28859221 | 1438..1869 | 100 | Plus |
Translation from 2 to 1591
> LD37690.hyp HIDSDNSKVNNNKRYNITNNCNALAVMANSSSSDESCKAPDNFRISSAST NGEDEESDVAGYTTKRRPTAATKELLKDANAKDRNATTGMGAHMRCPLCH SCSASRFHCRNCVRNGNITHSQAERPESLTEKQQRYINLQAGLKTFSTRY ERLIGQHRSNEDRLMAIKAKRKQLELLQQLISGTGQRLRVLGERRDELRR ANAEKRKNLPKYPDKVKMLENYVLDRVEKIEKLRETHLGLLDSIKQAARR SIQQLVTYVFPIAEVVLKEEQQRRASVERTEEAETIAALADAKNTSYIRG KWVFHGSGISEVQYRIVGPSLPANGDYTAYLDWLADNKDDVPKATANEIT PSRFEAYRIVGALTYTAQLTQLLSFYLNVRLPHKIAYGDFCRKLLNEEQF RRKISRLNSNIMYLAYTQQVKLRALIEQHTLENLLAILDLERSDLGRYGH LDVNNAPLMKSVDSLLIGIETATESESEDENSLRMDWEAVPSLTPQPELA DPNLMPAANQQSTIAFVRMAATSVLRWIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atg14-PA | 503 | CG11877-PA | 1..503 | 27..529 | 2563 | 100 | Plus |
Translation from 80 to 1591
> LD37690.pep MANSSSSDESCKAPDNFRISSASTNGEDEESDVAGYTTKRRPTAATKELL KDANAKDRNATTGMGAHMRCPLCHSCSASRFHCRNCVRNGNITHSQAERP ESLTEKQQRYINLQAGLKTFSTRYERLIGQHRSNEDRLMAIKAKRKQLEL LQQLISGTGQRLRVLGERRDELRRANAEKRKNLPKYPDKVKMLENYVLDR VEKIEKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAEVVLKEEQQRRAS VERTEEAETIAALADAKNTSYIRGKWVFHGSGISEVQYRIVGPSLPANGD YTAYLDWLADNKDDVPKATANEITPSRFEAYRIVGALTYTAQLTQLLSFY LNVRLPHKIAYGDFCRKLLNEEQFRRKISRLNSNIMYLAYTQQVKLRALI EQHTLENLLAILDLERSDLGRYGHLDVNNAPLMKSVDSLLIGIETATESE SEDENSLRMDWEAVPSLTPQPELADPNLMPAANQQSTIAFVRMAATSVLR WIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23288-PA | 506 | GF23288-PA | 13..506 | 11..503 | 2251 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11644-PA | 503 | GG11644-PA | 1..503 | 1..503 | 2660 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19651-PA | 509 | GH19651-PA | 1..509 | 1..503 | 1852 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atg14-PA | 503 | CG11877-PA | 1..503 | 1..503 | 2563 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22272-PA | 498 | GI22272-PA | 1..498 | 1..503 | 1806 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23910-PA | 496 | GL23910-PA | 1..496 | 1..503 | 2187 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11253-PA | 496 | GA11253-PA | 1..496 | 1..503 | 2187 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12766-PA | 483 | GM12766-PA | 1..483 | 1..503 | 2529 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21414-PA | 503 | GD21414-PA | 1..503 | 1..503 | 2677 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24065-PA | 496 | GJ24065-PA | 1..496 | 1..503 | 1824 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11889-PA | 506 | GK11889-PA | 14..506 | 12..503 | 2032 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23834-PA | 503 | GE23834-PA | 1..503 | 1..503 | 2667 | 98.2 | Plus |