BDGP Sequence Production Resources |
Search the DGRC for LD37787
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 377 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | Pu-RA |
Protein status: | LD37787.pep: gold |
Preliminary Size: | 1963 |
Sequenced Size: | 1805 |
Gene | Date | Evidence |
---|---|---|
CG9441 | 2001-07-04 | Blastp of sequenced clone |
CG9441 | 2003-01-01 | Sim4 clustering to Release 3 |
Pu | 2008-04-29 | Release 5.5 accounting |
Pu | 2008-08-15 | Release 5.9 accounting |
Pu | 2008-12-18 | 5.12 accounting |
1805 bp (1805 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051890
> LD37787.complete CCACCCGAAGCGCCAACACGCGAAGACAAAGTCCGGCAGACAGCAGCGCA AAAAGAGACAGATAGCAGTGAGAAAATCATCGAGGAAAAAAGATTGTGTG CTAGCCGTCAAATTGAGTTCCATTCGAGTGGCAAACAAACCTGAGTAGCC GCACCGCCATGAGCTTTACCCGCCAACTGTCCGAGATGAGTGCCAGCGAG CTGAACGATGCCATCGACGACACCAACTTCCCGCAGGCCCACATCCTTTC GCGCGGACGCAACAACAGCGTCTGCTCAACAAGTAGCACCTCGGGCACCT CCTCGCTGGCGGACAGGCAGCAGAACCAGGCGGAGGAGGCCACTGCCATT GCGGGCACACCCGTCGAGGAGGTGGCGCCAGCTCCTGCTCTCGTCCCGTT GGCCGGCAACCAGAGACCCCGCCTCATCCTGAAGACCAACGGCAGCAGTC CGGATAGTGATGGTACACAACCGAAAACACCACTGACACCGCGTACATCG ACAACGCCAGGCCACGAGAAGTGCACGTTCCACCACGACCTGGAGCTGGA CCACAAGCCGCCGACGCGAGAGGCCCTCCTTCCGGACATGGCACGCTCGT ATCGTCTACTCTTGGGCGGCCTGGGCGAGAATCCCGATCGCCAGGGACTG ATCAAGACGCCGGAGCGGGCAGCCAAGGCCATGCTGTACTTCACCAAGGG CTACGACCAGAGTCTCGAGGATGTTCTCAATGGCGCCGTTTTCGACGAGG ATCATGACGAAATGGTGGTGGTCAAGGATATTGAAATGTTCTCCATGTGC GAGCATCATCTGGTGCCCTTCTACGGCAAAGTTTCCATCGGTTATTTGCC GTGCAACAAGATTCTCGGACTCAGTAAATTGGCACGCATTGTCGAAATAT TTTCGCGTCGCCTGCAAGTCCAGGAGCGCTTAACTAAGCAGATCGCAGTG GCCGTGACTCAGGCCGTGCAACCCGCTGGAGTAGCAGTGGTCGTAGAGGG AGTCCACATGTGCATGGTGATGCGTGGCGTGCAGAAGATCAACAGCAAAA CTGTTACCTCAACTATGCTGGGCGTGTTCCGAGACGATCCCAAGACCCGT GAGGAATTCCTGAACTTAGTCAATAGCAAATAGAGTGGGCACTAGAGGAC GCTACTGAAATCCGAGACCAACTAAACCCCTACAATATTTTTGGAGGCGC TTATATACAAACAAACAAAAATGAAACGAAACACAGGGTCCATTAGTTTA TGTTTTTAGGATTGATTTCATTTAGTTAGTGCAATGATTGCGCAGCCATT TTCCTTGTTGATTTGTGTAAAAATTGTTGAAAAATTTTGTTAGCAAAATA CGTTTTTTAGATAGATGAATGTAATGAGAAGCGAGATTCGAAGAGGACGA GATTTGAATACCGGTGTTGGGTAGTTTTATGTTCAATTTTATATGCAGTT TTATGGCACTTGAACGATAATTTTTACAACGTATACATACGATTAATGCA TTGTGCAATAAGGGAACAACTGATAATAAATCACGGCAAATTGTTTAGGG AATTTACAATTTATAAACAGTTCACATCAAATTAATCAGATCTATAGTTA TGTATGTATGTTAACCTATATAAAGAGTTGCATTCATAATGTTCCTCGAC AGGGACCAAAGTATATTGGAAGATTTTAAATGTTAAAATTATATGCTCAT TATGTAAATGACGTTGCTTGTAGTGAGTCAAAGCTGCTTATTAATTATAC AATAAATTATGTATTTAAATAACGTTAAAAAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pu-RA | 1823 | Pu-RA | 40..1819 | 1..1780 | 8900 | 100 | Plus |
Pu.a | 1803 | Pu.a | 17..1799 | 1..1780 | 8845 | 99.8 | Plus |
Pu.b | 1806 | Pu.b | 532..1802 | 510..1780 | 6355 | 100 | Plus |
Pu.b | 1806 | Pu.b | 17..527 | 1..511 | 2555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17068294..17069065 | 1004..1776 | 3770 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 17065597..17066107 | 1..511 | 2450 | 98.6 | Plus |
chr2R | 21145070 | chr2R | 17066398..17066610 | 508..720 | 1065 | 100 | Plus |
chr2R | 21145070 | chr2R | 17067877..17068043 | 720..886 | 835 | 100 | Plus |
chr2R | 21145070 | chr2R | 17068102..17068219 | 886..1003 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21181836..21182612 | 1004..1780 | 3885 | 100 | Plus |
2R | 25286936 | 2R | 21179135..21179645 | 1..511 | 2555 | 100 | Plus |
2R | 25286936 | 2R | 21179935..21180147 | 508..720 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 21181419..21181585 | 720..886 | 835 | 100 | Plus |
2R | 25286936 | 2R | 21181644..21181761 | 886..1003 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21183035..21183811 | 1004..1780 | 3885 | 100 | Plus |
2R | 25260384 | 2R | 21180334..21180844 | 1..511 | 2555 | 100 | Plus |
2R | 25260384 | 2R | 21181134..21181346 | 508..720 | 1065 | 100 | Plus |
2R | 25260384 | 2R | 21182618..21182784 | 720..886 | 835 | 100 | Plus |
2R | 25260384 | 2R | 21182843..21182960 | 886..1003 | 590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17065597..17066106 | 1..510 | 98 | -> | Plus |
chr2R | 17066401..17066610 | 511..720 | 100 | -> | Plus |
chr2R | 17067878..17068043 | 721..886 | 100 | -> | Plus |
chr2R | 17068103..17068219 | 887..1003 | 99 | -> | Plus |
chr2R | 17068294..17069024 | 1004..1735 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 1..975 | 159..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 1..975 | 159..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 1..975 | 159..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 1..975 | 159..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 1..975 | 159..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 17..1792 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 17..1792 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 18..1793 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 17..1792 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pu-RA | 18..1793 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21179135..21179644 | 1..510 | 100 | -> | Plus |
2R | 21179938..21180147 | 511..720 | 100 | -> | Plus |
2R | 21181420..21181585 | 721..886 | 100 | -> | Plus |
2R | 21181645..21181761 | 887..1003 | 100 | -> | Plus |
2R | 21181836..21182608 | 1004..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21179135..21179644 | 1..510 | 100 | -> | Plus |
2R | 21179938..21180147 | 511..720 | 100 | -> | Plus |
2R | 21181420..21181585 | 721..886 | 100 | -> | Plus |
2R | 21181645..21181761 | 887..1003 | 100 | -> | Plus |
2R | 21181836..21182608 | 1004..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21179135..21179644 | 1..510 | 100 | -> | Plus |
2R | 21179938..21180147 | 511..720 | 100 | -> | Plus |
2R | 21181420..21181585 | 721..886 | 100 | -> | Plus |
2R | 21181645..21181761 | 887..1003 | 100 | -> | Plus |
2R | 21181836..21182608 | 1004..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17066640..17067149 | 1..510 | 100 | -> | Plus |
arm_2R | 17067443..17067652 | 511..720 | 100 | -> | Plus |
arm_2R | 17068925..17069090 | 721..886 | 100 | -> | Plus |
arm_2R | 17069150..17069266 | 887..1003 | 100 | -> | Plus |
arm_2R | 17069341..17070113 | 1004..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21180334..21180843 | 1..510 | 100 | -> | Plus |
2R | 21181137..21181346 | 511..720 | 100 | -> | Plus |
2R | 21182619..21182784 | 721..886 | 100 | -> | Plus |
2R | 21182844..21182960 | 887..1003 | 100 | -> | Plus |
2R | 21183035..21183807 | 1004..1776 | 100 | Plus |
Translation from 158 to 1132
> LD37787.hyp MSFTRQLSEMSASELNDAIDDTNFPQAHILSRGRNNSVCSTSSTSGTSSL ADRQQNQAEEATAIAGTPVEEVAPAPALVPLAGNQRPRLILKTNGSSPDS DGTQPKTPLTPRTSTTPGHEKCTFHHDLELDHKPPTREALLPDMARSYRL LLGGLGENPDRQGLIKTPERAAKAMLYFTKGYDQSLEDVLNGAVFDEDHD EMVVVKDIEMFSMCEHHLVPFYGKVSIGYLPCNKILGLSKLARIVEIFSR RLQVQERLTKQIAVAVTQAVQPAGVAVVVEGVHMCMVMRGVQKINSKTVT STMLGVFRDDPKTREEFLNLVNSK*
Translation from 158 to 1132
> LD37787.pep MSFTRQLSEMSASELNDAIDDTNFPQAHILSRGRNNSVCSTSSTSGTSSL ADRQQNQAEEATAIAGTPVEEVAPAPALVPLAGNQRPRLILKTNGSSPDS DGTQPKTPLTPRTSTTPGHEKCTFHHDLELDHKPPTREALLPDMARSYRL LLGGLGENPDRQGLIKTPERAAKAMLYFTKGYDQSLEDVLNGAVFDEDHD EMVVVKDIEMFSMCEHHLVPFYGKVSIGYLPCNKILGLSKLARIVEIFSR RLQVQERLTKQIAVAVTQAVQPAGVAVVVEGVHMCMVMRGVQKINSKTVT STMLGVFRDDPKTREEFLNLVNSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11941-PA | 285 | GF11941-PA | 75..285 | 114..324 | 1066 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22097-PA | 271 | GG22097-PA | 61..271 | 114..324 | 1134 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20729-PA | 337 | GH20729-PA | 1..337 | 1..324 | 1363 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pu-PA | 324 | CG9441-PA | 1..324 | 1..324 | 1660 | 100 | Plus |
Pu-PC | 308 | CG9441-PC | 1..308 | 1..324 | 1546 | 95.1 | Plus |
Pu-PB | 273 | CG9441-PB | 63..273 | 114..324 | 1071 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20812-PA | 274 | GI20812-PA | 68..274 | 118..324 | 1057 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10161-PA | 274 | GL10161-PA | 68..274 | 118..324 | 1057 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30270-PB | 325 | GA30270-PB | 1..325 | 1..324 | 1445 | 89.7 | Plus |
Dpse\GA30270-PA | 277 | GA30270-PA | 72..277 | 119..324 | 1052 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15814-PA | 273 | GM15814-PA | 63..273 | 114..324 | 1135 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11572-PA | 273 | GD11572-PA | 63..273 | 114..324 | 1135 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20545-PA | 270 | GJ20545-PA | 64..270 | 118..324 | 1056 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21906-PA | 321 | GK21906-PA | 1..321 | 1..324 | 1421 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12177-PA | 271 | GE12177-PA | 61..271 | 114..324 | 1131 | 98.1 | Plus |