BDGP Sequence Production Resources |
Search the DGRC for LD37859
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 378 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS27-RA |
Protein status: | LD37859.pep: gold |
Preliminary Size: | 715 |
Sequenced Size: | 733 |
Gene | Date | Evidence |
---|---|---|
CG10423 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10423 | 2002-05-18 | Blastp of sequenced clone |
RpS27 | 2008-04-29 | Release 5.5 accounting |
RpS27 | 2008-08-15 | Release 5.9 accounting |
RpS27 | 2008-12-18 | 5.12 accounting |
733 bp (733 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118959
> LD37859.complete CAAGTTAAGTTGGCTGCGATTTACCCCACTTCCTTTTCCGTGTTAGCTGT GAAAGAAAAAACATGCCGCTAGCAAAAGATCTTCTGCACCCTCTGCCCGC CGAGGAGAAGCGCAAGCACAAGCTGAAGCGCCTGGTCCAGCACCCCAACT CGTACTTCATGGACGTGAAGTGCCCCGGCTGCTACAGGATCACCACCGTC TTCAGCCACGCCCAAGGCGTCGTGGTCTGCGCTGGATGCGCTACCATTTT GTGCCAGCCGACTGGAGGACGCGCCAAGCTGACAGAAGGCTGCTCCTTCC GCAGGAAGCCACAGTAAAATGGGACTCGCGATGAACCACAAATTATTAAT TTTTTAATAAAAACTCTAAAACGTAAAGAAACCACAGAACCCATACGAGA GAAAGCTTGTAATTCAATTGCTGCGGTCCTTTGGTTCATTGTGCTTTGTG AATTAAAGAATTAACGATGTTGTGGTCGGCTAAGTGAAAAAAAAAACAGT TCTTGTCGTATTTGTTTATAGAAAGTGGATAATTGCCAACAGGATAGATA GTGGAGCTCAATCGCTGGGGTTCCCCGATAAGAAACCGCCCATAATGGAA GCTCTTGTGTGTGCAAATACCCTTGTGCGGCAAAACTTCAGGAATTTTTC ACTAGTTATGCTTAGATCTAACCATTGATTAACTTCACAACAATAAAGAA TGTTTCATAGGCTCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21069039..21069467 | 715..287 | 2145 | 100 | Minus |
chr3R | 27901430 | chr3R | 21069531..21069756 | 289..64 | 1115 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 21070517..21070584 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25245952..25246383 | 718..287 | 2160 | 100 | Minus |
3R | 32079331 | 3R | 25246447..25246672 | 289..64 | 1115 | 99.6 | Minus |
3R | 32079331 | 3R | 25247433..25247500 | 68..1 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24986783..24987214 | 718..287 | 2160 | 100 | Minus |
3R | 31820162 | 3R | 24987278..24987503 | 289..64 | 1115 | 99.5 | Minus |
3R | 31820162 | 3R | 24988264..24988331 | 68..1 | 340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21069532..21069751 | 69..288 | 100 | <- | Minus |
chr3R | 21070517..21070584 | 1..68 | 100 | Minus | |
chr3R | 21069039..21069465 | 289..715 | 94 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..255 | 63..317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RB | 1..255 | 63..317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..255 | 63..317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..255 | 63..317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..255 | 63..317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..715 | 1..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 15..729 | 1..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 15..729 | 1..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 1..715 | 1..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS27-RA | 15..729 | 1..715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25246448..25246667 | 69..288 | 100 | <- | Minus |
3R | 25247433..25247500 | 1..68 | 100 | Minus | |
3R | 25245955..25246381 | 289..715 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25246448..25246667 | 69..288 | 100 | <- | Minus |
3R | 25247433..25247500 | 1..68 | 100 | Minus | |
3R | 25245955..25246381 | 289..715 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25246448..25246667 | 69..288 | 100 | <- | Minus |
3R | 25247433..25247500 | 1..68 | 100 | Minus | |
3R | 25245955..25246381 | 289..715 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21072170..21072389 | 69..288 | 100 | <- | Minus |
arm_3R | 21073155..21073222 | 1..68 | 100 | Minus | |
arm_3R | 21071677..21072103 | 289..715 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24986786..24987212 | 289..715 | 100 | <- | Minus |
3R | 24987279..24987498 | 69..288 | 100 | <- | Minus |
3R | 24988264..24988331 | 1..68 | 100 | Minus |
Translation from 62 to 316
> LD37859.hyp MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHA QGVVVCAGCATILCQPTGGRAKLTEGCSFRRKPQ*
Translation from 62 to 316
> LD37859.pep MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHA QGVVVCAGCATILCQPTGGRAKLTEGCSFRRKPQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17433-PA | 84 | GF17433-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12272-PA | 84 | GG12272-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19510-PA | 84 | GH19510-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS27-PB | 84 | CG10423-PB | 1..84 | 1..84 | 461 | 100 | Plus |
RpS27-PA | 84 | CG10423-PA | 1..84 | 1..84 | 461 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22987-PA | 84 | GI22987-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12615-PA | 84 | GL12615-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10310-PA | 91 | GA10310-PA | 1..84 | 1..84 | 445 | 100 | Plus |
Dpse\GA27572-PA | 84 | GA27572-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17738-PA | 84 | GM17738-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18221-PA | 84 | GD18221-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24684-PA | 84 | GJ24684-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14300-PA | 84 | GK14300-PA | 1..84 | 1..84 | 444 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10722-PA | 84 | GE10722-PA | 1..84 | 1..84 | 444 | 100 | Plus |