BDGP Sequence Production Resources |
Search the DGRC for LD37882
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 378 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42496-RA |
Protein status: | LD37882.pep2: gold LD37882.pep: gold |
Preliminary Size: | 1187 |
Sequenced Size: | 1074 |
Gene | Date | Evidence |
---|---|---|
CG17950 | 2002-01-01 | Sim4 clustering to Release 2 |
CG30290 | 2002-05-04 | Blastp of sequenced clone |
CG30290 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30290 | 2008-04-29 | Release 5.5 accounting |
CG30290 | 2008-08-15 | Release 5.9 accounting |
CG30290 | 2008-12-18 | 5.12 accounting |
1074 bp (1074 high quality bases) assembled on 2002-05-04
GenBank Submission: AY102691.1
> LD37882.complete CAACATTCTCTGGTCACACTGACTTGCTGTTTACACAATTATTTCGTAAT TTTAAGTCATATTTTATCAATGAATTAAGATAAGGAGCGAGCAGAGCAAC TCACAAATGACTTCGCAGATCTACAGCCAGAAGAAGTTCGTGCCCACGCC GCCCGAGAAGGGTTCCTTTCCCCTGGACCACGAAGGTCTCTGCAAGAAGC AATTCCTCCTCTACGCCAGTTGTCTGCGCAAGAACGCCCAGGATACGAGC CAGTGCCGCCAGGACGCCCAGAACTACCTGGCCTGTCGCATGGACAACAA TCTTATGGAGAAAACCGAGTGGTCCAAGTTGGGCTTTCACGACCAGAGTA CCAAGACCGATCAAAAAGAACCGGAGGTGCAGAAGCAATAGCCGGCATTG TGAGCCATGAAACCCGAACGTAATGTGATGATAGCGGCCACCGGAAGTGT GGCCACCATTAAGTTAGCCCAGTTAATCCGAGAGCTCTCCGACGAGCGCC TACCCTTTAAGTTCCACCTGAAAGTACTTATTACCGAAGCAGCCAAACAC TTCTTTGAACTGGAGCAGATTCCCGAAAATGTACCCATTTACCACAATCG CGACGAGTGGATCACCTGGAACAAGCGAGGAGATCCTGTACTCCACATAG ATCTAGGCAAGTGGGCGGATTTGTTGGTAATAGCCCCACTCAGCGCAAAC TCTCTGTCCAAAATGGCCACCGGGATTTGCGATAATATCGTCATGTGTGT GGTGCGGGCCTGGGACCTTGAGAAGCCGCTGCTCTTTGCACCTGCGATGA ATACCCGTATGTACGACCATCCAATAACTCGGGAGCAGATCGACAAGCTG ACCAGTTGGGGCTACAAGGAGATACCCTGCATATCCAAGACTCTGATGTG CGGTGATACTGGCAACGGCGCCATGGCGGAGGTACCCACAATTGTGGAAG CGGTGTTATCCGCCTTTCAGCCGATTAAATAGTTATGCACACAAAGTTTA TATCGCAGAATATTTTGTTACAATAGTTAGACAAATAATATGGAATTGGC TATGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17578075..17578655 | 1..581 | 2800 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 17578917..17579249 | 722..1054 | 1635 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 17578718..17578859 | 581..722 | 680 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21691590..21692170 | 1..581 | 2905 | 100 | Plus |
2R | 25286936 | 2R | 21692432..21692767 | 722..1057 | 1680 | 100 | Plus |
2R | 25286936 | 2R | 21692234..21692375 | 581..722 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21692789..21693369 | 1..581 | 2905 | 100 | Plus |
2R | 25260384 | 2R | 21693631..21693966 | 722..1057 | 1680 | 100 | Plus |
2R | 25260384 | 2R | 21693433..21693574 | 581..722 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 13031..13078 | 95..46 | 110 | 72 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17578075..17578655 | 1..581 | 98 | -> | Plus |
chr2R | 17578719..17578858 | 582..721 | 98 | -> | Plus |
chr2R | 17578917..17579249 | 722..1054 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30290-RA | 1..576 | 407..982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcdc-RA | 1..576 | 407..982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcdc-RA | 1..576 | 407..982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30290-RA | 1..576 | 407..982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcdc-RA | 1..576 | 407..982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30290-RA | 1..1054 | 1..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42496-RA | 1..1054 | 1..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcdc-RA | 11..1064 | 1..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30290-RA | 1..1054 | 1..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcdc-RA | 11..1064 | 1..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21691590..21692170 | 1..581 | 100 | -> | Plus |
2R | 21692235..21692374 | 582..721 | 100 | -> | Plus |
2R | 21692432..21692764 | 722..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21691590..21692170 | 1..581 | 100 | -> | Plus |
2R | 21692235..21692374 | 582..721 | 100 | -> | Plus |
2R | 21692432..21692764 | 722..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21691590..21692170 | 1..581 | 100 | -> | Plus |
2R | 21692235..21692374 | 582..721 | 100 | -> | Plus |
2R | 21692432..21692764 | 722..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17579095..17579675 | 1..581 | 100 | -> | Plus |
arm_2R | 17579740..17579879 | 582..721 | 100 | -> | Plus |
arm_2R | 17579937..17580269 | 722..1054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21692789..21693369 | 1..581 | 100 | -> | Plus |
2R | 21693434..21693573 | 582..721 | 100 | -> | Plus |
2R | 21693631..21693963 | 722..1054 | 100 | Plus |
Translation from 106 to 390
> LD37882.pep2 MTSQIYSQKKFVPTPPEKGSFPLDHEGLCKKQFLLYASCLRKNAQDTSQC RQDAQNYLACRMDNNLMEKTEWSKLGFHDQSTKTDQKEPEVQKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13263-PA | 93 | GF13263-PA | 1..81 | 1..81 | 420 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22133-PA | 94 | GG22133-PA | 1..94 | 1..94 | 487 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42496-PB | 94 | CG42496-PB | 1..94 | 1..94 | 509 | 100 | Plus |
CG42496-PA | 94 | CG42496-PA | 1..94 | 1..94 | 509 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16945-PA | 89 | GL16945-PA | 1..80 | 1..80 | 425 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24997-PA | 89 | GA24997-PA | 1..80 | 1..80 | 425 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15857-PA | 94 | GM15857-PA | 1..94 | 1..94 | 498 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16924-PA | 94 | GD16924-PA | 1..94 | 1..94 | 498 | 98.9 | Plus |
Dsim\GD11619-PA | 94 | GD11619-PA | 1..94 | 1..94 | 498 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21565-PA | 270 | GJ21565-PA | 1..55 | 1..55 | 246 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12215-PA | 94 | GE12215-PA | 1..94 | 1..94 | 494 | 97.9 | Plus |
Translation from 406 to 981
> LD37882.hyp MKPERNVMIAATGSVATIKLAQLIRELSDERLPFKFHLKVLITEAAKHFF ELEQIPENVPIYHNRDEWITWNKRGDPVLHIDLGKWADLLVIAPLSANSL SKMATGICDNIVMCVVRAWDLEKPLLFAPAMNTRMYDHPITREQIDKLTS WGYKEIPCISKTLMCGDTGNGAMAEVPTIVEAVLSAFQPIK*
Translation from 406 to 981
> LD37882.pep MKPERNVMIAATGSVATIKLAQLIRELSDERLPFKFHLKVLITEAAKHFF ELEQIPENVPIYHNRDEWITWNKRGDPVLHIDLGKWADLLVIAPLSANSL SKMATGICDNIVMCVVRAWDLEKPLLFAPAMNTRMYDHPITREQIDKLTS WGYKEIPCISKTLMCGDTGNGAMAEVPTIVEAVLSAFQPIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13264-PA | 191 | GF13264-PA | 1..188 | 1..188 | 935 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22134-PA | 191 | GG22134-PA | 1..189 | 1..189 | 1000 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22990-PA | 192 | GH22990-PA | 1..187 | 1..187 | 822 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ppcdc-PB | 191 | CG30290-PB | 1..191 | 1..191 | 1005 | 100 | Plus |
Ppcdc-PA | 191 | CG30290-PA | 1..191 | 1..191 | 1005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18958-PA | 191 | GI18958-PA | 1..187 | 1..187 | 850 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16946-PA | 191 | GL16946-PA | 1..188 | 1..188 | 919 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15754-PA | 191 | GA15754-PA | 1..188 | 1..188 | 922 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15858-PA | 191 | GM15858-PA | 1..191 | 1..191 | 1002 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11620-PA | 191 | GD11620-PA | 1..191 | 1..191 | 1000 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21565-PA | 270 | GJ21565-PA | 80..267 | 1..188 | 881 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15923-PA | 194 | GK15923-PA | 1..188 | 1..188 | 903 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12216-PA | 191 | GE12216-PA | 1..189 | 1..189 | 998 | 97.9 | Plus |